Comprehensive characterization of claudin-low breast tumors reflects the impact of the cell-of-origin on cancer evolution von Pommier, Roxane M., Sanlaville, Amélien, Tonon, Laurie, Kielbassa, Janice, Thomas, Emilie, Ferrari, Anthony, Sertier, Anne-Sophie, Hollande, Frédéric, Martinez, Pierre, Tissier, Agnès, Morel, Anne-Pierre, Ouzounova, Maria, Puisieux, Alain

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A 13-gene expression-based radioresistance score highlights the heterogeneity in the response to radiation therapy across HPV-negative HNSCC molecular subtypes von Foy, Jean-Philippe, Bazire, Louis, Ortiz-Cuaran, Sandra, Deneuve, Sophie, Kielbassa, Janice, Thomas, Emilie, Viari, Alain, Puisieux, Alain, Goudot, Patrick, Bertolus, Chloé, Foray, Nicolas, Kirova, Youlia, Verrelle, Pierre, Saintigny, Pierre

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Immunological and classical subtypes of oral premalignant lesions von Foy, Jean-Philippe, Bertolus, Chloé, Ortiz-Cuaran, Sandra, Albaret, Marie-Alexandra, Williams, William N, Lang, Wenhua, Destandau, Solène, Souza, Geneviève De, Sohier, Emilie, Kielbassa, Janice, Thomas, Emilie, Deneuve, Sophie, Goudot, Patrick, Puisieux, Alain, Viari, Alain, Mao, Li, Caux, Christophe, Lippman, SM, Saintigny, P

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Exploration of the core metabolism of symbiotic bacteria von Klein, Cecilia Coimbra, Cottret, Ludovic, Kielbassa, Janice, Charles, Hubert, Gautier, Christian, Ribeiro de Vasconcelos, Ana Tereza, Lacroix, Vincent, Sagot, Marie-France

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SNP calling from RNA-seq data without a reference genome: identification, quantification, differential analysis and impact on the protein sequence von Lopez-Maestre, Hélène, Brinza, Lilia, Marchet, Camille, Kielbassa, Janice, Bastien, Sylvère, Boutigny, Mathilde, Monnin, David, Filali, Adil El, Carareto, Claudia Marcia, Vieira, Cristina, Picard, Franck, Kremer, Natacha, Vavre, Fabrice, Sagot, Marie-France, Lacroix, Vincent

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A whole-genome sequence and transcriptome perspective on HER2-positive breast cancers von Ferrari, Anthony, Vincent-Salomon, Anne, Pivot, Xavier, Sertier, Anne-Sophie, Thomas, Emilie, Tonon, Laurie, Boyault, Sandrine, Mulugeta, Eskeatnaf, Treilleux, Isabelle, MacGrogan, Gaëtan, Arnould, Laurent, Kielbassa, Janice, Le Texier, Vincent, Blanché, Hélène, Deleuze, Jean-François, Jacquemier, Jocelyne, Mathieu, Marie-Christine, Penault-Llorca, Frédérique, Bibeau, Frédéric, Mariani, Odette, Mannina, Cécile, Pierga, Jean-Yves, Trédan, Olivier, Bachelot, Thomas, Bonnefoi, Hervé, Romieu, Gilles, Fumoleau, Pierre, Delaloge, Suzette, Rios, Maria, Ferrero, Jean-Marc, Tarpin, Carole, Bouteille, Catherine, Calvo, Fabien, Gut, Ivo Glynne, Gut, Marta, Martin, Sancha, Nik-Zainal, Serena, Stratton, Michael R., Pauporté, Iris, Saintigny, Pierre, Birnbaum, Daniel, Viari, Alain, Thomas, Gilles

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Mutational Profile of Aggressive, Localised Prostate Cancer from African Caribbean Men Versus European Ancestry Men von Tonon, Laurie, Fromont, Gaëlle, Boyault, Sandrine, Thomas, Emilie, Ferrari, Anthony, Sertier, Anne-Sophie, Kielbassa, Janice, Le Texier, Vincent, Kamoun, Aurélie, Elarouci, Nabila, Irani, Jacques, Multigner, Luc, Gut, Ivo Glynne, Gut, Marta, Blanchet, Pascal, De Reynies, Aurélien, Cancel-Tassin, Géraldine, Viari, Alain, Cussenot, Olivier

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KISSPLICE: de-novo calling alternative splicing events from RNA-seq data von Sacomoto, Gustavo A T, Kielbassa, Janice, Chikhi, Rayan, Uricaru, Raluca, Antoniou, Pavlos, Sagot, Marie-France, Peterlongo, Pierre, Lacroix, Vincent

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Isocitrate dehydrogenase wt and IDHmut adult-type diffuse gliomas display distinct alterations in ribosome biogenesis and 2’O-methylation of ribosomal RNA von Paraqindes, Hermes, Mourksi, Nour-El-Houda, Ballesta, Samantha, Hedjam, Jordan, Bourdelais, Fleur, Fenouil, Tanguy, Picart, Thiébaud, Catez, Frédéric, Combe, Théo, Ferrari, Anthony, Kielbassa, Janice, Thomas, Emilie, Tonon, Laurie, Viari, Alain, Attignon, Valéry, Carrere, Marjorie, Perrossier, Jessie, Giraud, Stéphane, Vanbelle, Christophe, Gabut, Mathieu, Bergeron, Danny, Scott, Michelle S, Castro Vega, Luis, Magne, Nathalie, Huillard, Emmanuelle, Sanson, Marc, Meyronet, David, Diaz, Jean-Jacques, Ducray, François, Marcel, Virginie, Durand, Sébastien

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Ribosomal RNA 2'O-methylation as a novel layer of inter-tumour heterogeneity in breast cancer von Marcel, Virginie, Kielbassa, Janice, Marchand, Virginie, Natchiar, Kundhavai S, Paraqindes, Hermes, Nguyen Van Long, Flora, Ayadi, Lilia, Bourguignon-Igel, Valérie, Lo Monaco, Piero, Monchiet, Déborah, Scott, Véronique, Tonon, Laurie, Bray, Susan E, Diot, Alexandra, Jordan, Lee B, Thompson, Alastair M, Bourdon, Jean-Christophe, Dubois, Thierry, André, Fabrice, Catez, Frédéric, Puisieux, Alain, Motorin, Yuri, Klaholz, Bruno P, Viari, Alain, Diaz, Jean-Jacques

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Ribosomal RNA 2′O-methylation as a novel layer of inter-tumour heterogeneity in breast cancer von Marcel, Virginie, Kielbassa, Janice, Marchand, Virginie, Natchiar, Kundhavai S, Paraqindes, Hermes, Nguyen Van Long, Flora, Ayadi, Lilia, Bourguignon-Igel, Valérie, Lo Monaco, Piero, Monchiet, Déborah, Scott, Véronique, Tonon, Laurie, Bray, Susan E, Diot, Alexandra, Jordan, Lee B, Thompson, Alastair M, Bourdon, Jean-Christophe, Dubois, Thierry, André, Fabrice, Catez, Frédéric, Puisieux, Alain, Motorin, Yuri, Klaholz, Bruno P, Viari, Alain, Diaz, Jean-Jacques

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An Early Neoplasia Index (ENI10), Based on Molecular Identity of CD10 Cells and Associated Stemness Biomarkers, is a Predictor of Patient Outcome in Many Cancers von Guyot, Boris, Clément, Flora, Drouet, Youenn, Schmidt, Xenia, Lefort, Sylvain, Delay, Emmanuel, Treilleux, Isabelle, Foy, Jean-Philippe, Jeanpierre, Sandrine, Thomas, Emilie, Kielbassa, Janice, Tonon, Laurie, Zhu, Helen He, Saintigny, Pierre, Gao, Wei-Qiang, de la Fouchardiere, Arnaud, Tirode, Franck, Viari, Alain, Blay, Jean-Yves, Maguer-Satta, Véronique

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Dissecting the Origin of Heterogeneity in Uterine and Ovarian Carcinosarcomas von Sertier, Anne-Sophie, Ferrari, Anthony, Pommier, Roxane M, Treilleux, Isabelle, Boyault, Sandrine, Devouassoux-Shisheboran, Mojgan, Kielbassa, Janice, Thomas, Emilie, Tonon, Laurie, Le Texier, Vincent, Charreton, Amandine, Morel, Anne-Pierre, Floquet, Anne, Joly, Florence, Berton-Rigaud, Dominique, Ferron, Gwenaël, Arnould, Laurent, Croce, Sabrina, Bataillon, Guillaume, Saintigny, Pierre, Mery-Lamarche, Eliane, Sagan, Christine, Senaratne, Aruni P, Gut, Ivo G, Calvo, Fabien, Viari, Alain, Ouzounova, Maria, Ray-Coquard, Isabelle, Puisieux, Alain

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KIS SPLICE: de-novo calling alternative splicing events from RNA-seq data von Sacomoto, Gustavo AT, Kielbassa, Janice, Chikhi, Rayan, Uricaru, Raluca, Antoniou, Pavlos, Sagot, Marie-France, Peterlongo, Pierre, Lacroix, Vincent

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K IS S PLICE : de-novo calling alternative splicing events from RNA-seq data von Sacomoto, Gustavo AT, Kielbassa, Janice, Chikhi, Rayan, Uricaru, Raluca, Antoniou, Pavlos, Sagot, Marie-France, Peterlongo, Pierre, Lacroix, Vincent

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An individual-based model to describe a bullhead population dynamics including temperature variations von Charles, Sandrine, Subtil, Fabien, Kielbassa, Janice, Pont, Didier

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Ribosomal RNA 2′ O-methylation as a novel layer of inter-tumour heterogeneity in breast cancer von Marcel, Virginie, Kielbassa, Janice, Marchand, Virginie, Natchiar, Kundhavai S, Paraqindes, Hermes, Van Long, Flora Nguyen, Ayadi, Lilia, Bourguignon-Igel, Valérie, Monaco, Piero Lo, Monchiet, Déborah, Scott, Véronique, Tonon, Laurie, Bray, Susan E, Diot, Alexandra, Jordan, Lee B, Thompson, Alastair M, Bourdon, Jean-Christophe, Dubois, Thierry, André, Fabrice, Catez, Frédéric, Puisieux, Alain, Motorin, Yuri, Klaholz, Bruno P, Viari, Alain, Diaz, Jean-Jacques

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Erratum: Ribosomal RNA 2' O-methylation as a novel layer of inter-tumour heterogeneity in breast cancer von Marcel, Virginie, Kielbassa, Janice, Marchand, Virginie, Natchiar, Kundhavai S, Paraqindes, Hermes, Van Long, Flora Nguyen, Ayadi, Lilia, Bourguignon-Igel, Valérie, Monaco, Piero Lo, Monchiet, Déborah, Scott, Véronique, Tonon, Laurie, Bray, Susan E, Diot, Alexandra, Jordan, Lee B, Thompson, Alastair M, Bourdon, Jean-Christophe, Dubois, Thierry, André, Fabrice, Catez, Frédéric, Puisieux, Alain, Motorin, Yuri, Klaholz, Bruno P, Viari, Alain, Diaz, Jean-Jacques

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RIBOSOMAL RNAS 2'O-METHYLATION AS A NOVEL SOURCE OF BIOMARKERS RELEVANT FOR DIAGNOSIS, PROGNOSIS AND THERAPY OF CANCERS von KIELBASSA, Janice, CATEZ, Frédéric, MARCEL-TERRIER, Virginie, DIAZ, Jean-Jacques

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Additional file 6: Figure S2. of A 13-gene expression-based radioresistance score highlights the heterogeneity in the response to radiation therapy across HPV-negative HNSCC molecu... von Jean-Philippe Foy, Bazire, Louis, Ortiz-Cuaran, Sandra, Deneuve, Sophie, Kielbassa, Janice, Thomas, Emilie, Viari, Alain, Puisieux, Alain, Goudot, Patrick, ChloĂŠ Bertolus, Foray, Nicolas, Kirova, Youlia, Verrelle, Pierre, Saintigny, Pierre

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