The Phyre2 web portal for protein modeling, prediction and analysis von Kelley, Lawrence A, Mezulis, Stefans, Yates, Christopher M, Wass, Mark N, Sternberg, Michael J E

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Protein structure prediction on the Web: a case study using the Phyre server von Kelley, Lawrence A, Sternberg, Michael J E

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ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology von Waese, Jamie, Fan, Jim, Pasha, Asher, Yu, Hans, Fucile, Geoffrey, Shi, Ruian, Cumming, Matthew, Kelley, Lawrence A., Sternberg, Michael J., Krishnakumar, Vivek, Ferlanti, Erik, Miller, Jason, Town, Chris, Stuerzlinger, Wolfgang, Provart, Nicholas J.

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SuSPect: Enhanced Prediction of Single Amino Acid Variant (SAV) Phenotype Using Network Features von Yates, Christopher M., Filippis, Ioannis, Kelley, Lawrence A., Sternberg, Michael J.E.

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PhyreRisk: A Dynamic Web Application to Bridge Genomics, Proteomics and 3D Structural Data to Guide Interpretation of Human Genetic Variants von Ofoegbu, Tochukwu C., David, Alessia, Kelley, Lawrence A., Mezulis, Stefans, Islam, Suhail A., Mersmann, Sophia F., Strömich, Léonie, Vakser, Ilya A., Houlston, Richard S., Sternberg, Michael J.E.

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High-quality protein backbone reconstruction from alpha carbons using Gaussian mixture models von Moore, Benjamin L., Kelley, Lawrence A., Barber, James, Murray, James W., MacDonald, James T.

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Identification of the Autochaperone Domain in the Type Va Secretion System (T5aSS): Prevalent Feature of Autotransporters with a β-Helical Passenger von Rojas-Lopez, Maricarmen, Zorgani, Mohamed A, Kelley, Lawrence A, Bailly, Xavier, Kajava, Andrey V, Henderson, Ian R, Polticelli, Fabio, Pizza, Mariagrazia, Rosini, Roberto, Desvaux, Mickaël

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Functional significance of mutations in the Snf2 domain of ATRX von MITSON, Matthew, KELLEY, Lawrence A, STERNBERG, Michael J. E, HIGGS, Douglas R, GIBBONS, Richard J

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Validating a Coarse-Grained Potential Energy Function through Protein Loop Modelling von Macdonald, James T, Kelley, Lawrence A, Freemont, Paul S

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A new structural model of the acid-labile subunit: pathogenetic mechanisms of short stature-causing mutations von David, Alessia, Kelley, Lawrence A, Sternberg, Michael J E

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3DLigandSite: predicting ligand-binding sites using similar structures von Wass, Mark N, Kelley, Lawrence A, Sternberg, Michael J.E

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Exploring the extremes of sequence/structure space with ensemble fold recognition in the program Phyre von Bennett-Lovsey, Riccardo M., Herbert, Alex D., Sternberg, Michael J. E., Kelley, Lawrence A.

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PhyreStorm: A Web Server for Fast Structural Searches Against the PDB von Mezulis, Stefans, Sternberg, Michael J.E., Kelley, Lawrence A.

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Protein Folding Requires Crowd Control in a Simulated Cell von Jefferys, Benjamin R., Kelley, Lawrence A., Sternberg, Michael J.E.

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Genome3D: integrating a collaborative data pipeline to expand the depth and breadth of consensus protein structure annotation von Sillitoe, Ian, Andreeva, Antonina, Blundell, Tom L, Buchan, Daniel W A, Finn, Robert D, Gough, Julian, Jones, David, Kelley, Lawrence A, Paysan-Lafosse, Typhaine, Lam, Su Datt, Murzin, Alexey G, Pandurangan, Arun Prasad, Salazar, Gustavo A, Skwark, Marcin J, Sternberg, Michael J E, Velankar, Sameer, Orengo, Christine

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Partial protein domains: evolutionary insights and bioinformatics challenges von Kelley, Lawrence A, Sternberg, Michael J E

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Progress in protein structure prediction: Assessment of CASP3 von Sternberg, Michael JE, Bates, Paul A, Kelley, Lawrence A, MacCallum, Robert M

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Genome3D: exploiting structure to help users understand their sequences von Lewis, Tony E, Sillitoe, Ian, Andreeva, Antonina, Blundell, Tom L, Buchan, Daniel W A, Chothia, Cyrus, Cozzetto, Domenico, Dana, José M, Filippis, Ioannis, Gough, Julian, Jones, David T, Kelley, Lawrence A, Kleywegt, Gerard J, Minneci, Federico, Mistry, Jaina, Murzin, Alexey G, Ochoa-Montaño, Bernardo, Oates, Matt E, Punta, Marco, Rackham, Owen J L, Stahlhacke, Jonathan, Sternberg, Michael J E, Velankar, Sameer, Orengo, Christine

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Enhancement of protein modeling by human intervention in applying the automatic programs 3D-JIGSAW and 3D-PSSM von Bates, Paul A., Kelley, Lawrence A., MacCallum, Robert M., Sternberg, Michael J.E.

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The proteome: structure, function and evolution von Fleming, Keiran, Kelley, Lawrence A, Islam, Suhail A, MacCallum, Robert M, Muller, Arne, Pazos, Florencio, Sternberg, Michael J.E

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