Sampling and energy evaluation challenges in ligand binding protein design von Dou, Jiayi, Doyle, Lindsey, Greisen, Per, Schena, Alberto, Park, Hahnbeom, Johnsson, Kai, Stoddard, Barry L., Baker, David

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Computational redesign of a mononuclear zinc metalloenzyme for organophosphate hydrolysis von Khare, Sagar D, Kipnis, Yakov, Greisen, Per Jr, Takeuchi, Ryo, Ashani, Yacov, Goldsmith, Moshe, Song, Yifan, Gallaher, Jasmine L, Silman, Israel, Leader, Haim, Sussman, Joel L, Stoddard, Barry L, Tawfik, Dan S, Baker, David

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Simultaneous Optimization of Biomolecular Energy Functions on Features from Small Molecules and Macromolecules von Park, Hahnbeom, Bradley, Philip, Greisen, Per, Liu, Yuan, Mulligan, Vikram Khipple, Kim, David E, Baker, David, DiMaio, Frank

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Improvement of a synthetic live bacterial therapeutic for phenylketonuria with biosensor-enabled enzyme engineering von Adolfsen, Kristin J., Callihan, Isolde, Monahan, Catherine E., Greisen, Per Jr, Spoonamore, James, Momin, Munira, Fitch, Lauren E., Castillo, Mary Joan, Weng, Lindong, Renaud, Lauren, Weile, Carl J., Konieczka, Jay H., Mirabella, Teodelinda, Abin-Fuentes, Andres, Lawrence, Adam G., Isabella, Vincent M.

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Linear rate-equilibrium relations arising from ion channel-bilayer energetic coupling von Greisen, Per Jr, Lum, Kevin, Ashrafuzzaman, Md, Greathouse, Denise V, Andersen, Olaf S, Lundbæk, Jens A

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Multi-input chemical control of protein dimerization for programming graded cellular responses von Foight, Glenna Wink, Wang, Zhizhi, Wei, Cindy T., Jr Greisen, Per, Warner, Katrina M., Cunningham-Bryant, Daniel, Park, Keunwan, Brunette, T. J., Sheffler, William, Baker, David, Maly, Dustin J.

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Anchor extension: a structure-guided approach to design cyclic peptides targeting enzyme active sites von Hosseinzadeh, Parisa, Watson, Paris R., Craven, Timothy W., Li, Xinting, Rettie, Stephen, Pardo-Avila, Fátima, Bera, Asim K., Mulligan, Vikram Khipple, Lu, Peilong, Ford, Alexander S., Weitzner, Brian D., Stewart, Lance J., Moyer, Adam P., Di Piazza, Maddalena, Whalen, Joshua G., Greisen, Per Jr, Christianson, David W., Baker, David

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Engineering V‑Type Nerve Agents Detoxifying Enzymes Using Computationally Focused Libraries von Cherny, Izhack, Greisen, Per, Ashani, Yacov, Khare, Sagar D, Oberdorfer, Gustav, Leader, Haim, Baker, David, Tawfik, Dan S

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Overcoming an optimization plateau in the directed evolution of highly efficient nerve agent bioscavengers von Goldsmith, Moshe, Aggarwal, Nidhi, Ashani, Yacov, Jubran, Halim, Greisen, Per Jr, Ovchinnikov, Sergey, Leader, Haim, Baker, David, Sussman, Joel L., Goldenzweig, Adi, Fleishman, Sarel J., Tawfik, Dan S.

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Computational design of N-linked glycans for high throughput epitope profiling von Per, Jr, Greisen, Yi, Li, Zhou, Rong, Zhou, Jian, Johansson, Eva, Dong, Tiantang, Liu, Haimo, Johnsen, Laust B, Lund, Søren, Svensson, L Anders, Zhu, Haisun, Thomas, Nidhin, Yang, Zhiru, Østergaard, Henrik

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Designed endocytosis-inducing proteins degrade targets and amplify signals von Huang, Buwei, Abedi, Mohamad, Ahn, Green, Coventry, Brian, Sappington, Isaac, Tang, Cong, Wang, Rong, Schlichthaerle, Thomas, Zhang, Jason Z, Wang, Yujia, Goreshnik, Inna, Chiu, Ching Wen, Chazin-Gray, Adam, Chan, Sidney, Gerben, Stacey, Murray, Analisa, Wang, Shunzhi, O'Neill, Jason, Yi, Li, Yeh, Ronald, Misquith, Ayesha, Wolf, Anitra, Tomasovic, Luke M, Piraner, Dan I, Duran Gonzalez, Maria J, Bennett, Nathaniel R, Venkatesh, Preetham, Ahlrichs, Maggie, Dobbins, Craig, Yang, Wei, Wang, Xinru, Sahtoe, Danny D, Vafeados, Dionne, Mout, Rubul, Shivaei, Shirin, Cao, Longxing, Carter, Lauren, Stewart, Lance, Spangler, Jamie B, Roybal, Kole T, Greisen, Per Jr, Li, Xiaochun, Bernardes, Gonçalo J L, Bertozzi, Carolyn R, Baker, David

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A systematic approach for evaluating the role of surface-exposed loops in trypsin-like serine proteases applied to the 170 loop in coagulation factor VIIa von Sorensen, Anders B., Greisen, Per Jr, Madsen, Jesper J., Lund, Jacob, Andersen, Gorm, Wulff-Larsen, Pernille G., Pedersen, Anette A., Gandhi, Prafull S., Overgaard, Michael T., Østergaard, Henrik, Olsen, Ole H.

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New insights into substrate folding preference of plant OSCs von Ma, Yongshuo, Zhou, Yuan, Ovchinnikov, Sergey, Greisen, Per, Huang, Sanwen, Shang, Yi

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Interaction between sodium dodecyl sulfate and membrane reconstituted aquaporins: A comparative study of spinach SoPIP2;1 and E. coli AqpZ von Hansen, Jesper S., Vararattanavech, Ardcharaporn, Plasencia, Inés, Greisen, Per Jr, Bomholt, Julie, Torres, Jaume, Emnéus, Jenny, Hélix-Nielsen, Claus

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Computational Redesign of Metalloenzymes for Catalyzing New Reactions von Greisen, Per Jr, Khare, Sagar D.

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Accurate de novo design of hyperstable constrained peptides von Bhardwaj, Gaurav, Mulligan, Vikram Khipple, Bahl, Christopher D., Gilmore, Jason M., Harvey, Peta J., Cheneval, Olivier, Buchko, Garry W., Pulavarti, Surya V. S. R. K., Kaas, Quentin, Eletsky, Alexander, Huang, Po-Ssu, Johnsen, William A., Greisen, Per Jr, Rocklin, Gabriel J., Song, Yifan, Linsky, Thomas W., Watkins, Andrew, Rettie, Stephen A., Xu, Xianzhong, Carter, Lauren P., Bonneau, Richard, Olson, James M., Coutsias, Evangelos, Correnti, Colin E., Szyperski, Thomas, Craik, David J., Baker, David

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Structure-Based Computational Scanning of Chemical Modification Sites in Biologics von Thomas, Nidhin, Sanyal, Tanmoy, Greisen, Jr, Per, Deibler, Kristine

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Catalytic efficiencies of directly evolved phosphotriesterase variants with structurally different organophosphorus compounds in vitro von Goldsmith, Moshe, Eckstein, Simone, Ashani, Yacov, Greisen, Per, Leader, Haim, Sussman, Joel L., Aggarwal, Nidhi, Ovchinnikov, Sergey, Tawfik, Dan S., Baker, David, Thiermann, Horst, Worek, Franz

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Analysis of First and Second Shell Interactions in Phosphate-Binding Proteins von Greisen, Per Jr, Hélix-Nielsen, Claus

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Mim8 - a Next-Generation FVIII Mimetic Bi-Specific Antibody - Potently Restores the Hemostatic Capacity in Hemophilia a Settings in Vitro and In Vivo von Kjellev, Stine L, Østergaard, Henrik, Greisen, Per Jr, Hermit, Mette B, Thorn, Karina, Hansen, Bjarne G, Zhou, Rong, Bjelke, Jais Rose, Kjalke, Marianne, Lund, Jacob, Holm, Thomas L, Ley, Carsten Dan, Elenius, Daniel, Thygesen, Peter, Loftager, Mette, Rasch, Morten G, Lorenzen, Nikolai, Gandhi, Prafull S, Lamberth, Kasper, Egebjerg, Thomas, Lund, Søren, Henriksen, Anette, Rahbek-Nielsen, Henrik, Yang, Zhiru, Hilden, Ida

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