DNA methylation arrays as surrogate measures of cell mixture distribution von Houseman, Eugene Andres, Accomando, William P, Koestler, Devin C, Christensen, Brock C, Marsit, Carmen J, Nelson, Heather H, Wiencke, John K, Kelsey, Karl T

Volltext

An optimized library for reference-based deconvolution of whole-blood biospecimens assayed using the Illumina HumanMethylationEPIC BeadArray von Salas, Lucas A, Koestler, Devin C, Butler, Rondi A, Hansen, Helen M, Wiencke, John K, Kelsey, Karl T, Christensen, Brock C

Volltext

Enhanced cell deconvolution of peripheral blood using DNA methylation for high-resolution immune profiling von Salas, Lucas A., Zhang, Ze, Koestler, Devin C., Butler, Rondi A., Hansen, Helen M., Molinaro, Annette M., Wiencke, John K., Kelsey, Karl T., Christensen, Brock C.

Volltext

Survival and low-grade glioma: the emergence of genetic information von Claus, Elizabeth B, Walsh, Kyle M, Wiencke, John K, Molinaro, Annette M, Wiemels, Joseph L, Schildkraut, Joellen M, Bondy, Melissa L, Berger, Mitchel, Jenkins, Robert, Wrensch, Margaret

Volltext

The transcription factor GABP selectively binds and activates the mutant TERT promoter in cancer von Bell, Robert J. A., Rube, H. Tomas, Kreig, Alex, Mancini, Andrew, Fouse, Shaun D., Nagarajan, Raman P., Choi, Serah, Hong, Chibo, He, Daniel, Pekmezci, Melike, Wiencke, John K., Wrensch, Margaret R., Chang, Susan M., Walsh, Kyle M., Myong, Sua, Song, Jun S., Costello, Joseph F.

Volltext

Aging and environmental exposures alter tissue-specific DNA methylation dependent upon CpG island context von Christensen, Brock C, Houseman, E Andres, Marsit, Carmen J, Zheng, Shichun, Wrensch, Margaret R, Wiemels, Joseph L, Nelson, Heather H, Karagas, Margaret R, Padbury, James F, Bueno, Raphael, Sugarbaker, David J, Yeh, Ru-Fang, Wiencke, John K, Kelsey, Karl T

Volltext

HiTIMED: hierarchical tumor immune microenvironment epigenetic deconvolution for accurate cell type resolution in the tumor microenvironment using tumor-type-specific DNA methylati... von Zhang, Ze, Wiencke, John K, Kelsey, Karl T, Koestler, Devin C, Christensen, Brock C, Salas, Lucas A

Volltext

Systematic evaluation and validation of reference and library selection methods for deconvolution of cord blood DNA methylation data von Gervin, Kristina, Salas, Lucas A, Bakulski, Kelly M, van Zelm, Menno C, Koestler, Devin C, Wiencke, John K, Duijts, Liesbeth, Moll, Henriëtte A, Kelsey, Karl T, Kobor, Michael S, Lyle, Robert, Christensen, Brock C, Felix, Janine F, Jones, Meaghan J

Volltext

Genetic predisposition to altered blood cell homeostasis is associated with glioma risk and survival von Kachuri, Linda, Guerra, Geno A., Nakase, Taishi, Wendt, George A., Hansen, Helen M., Molinaro, Annette M., Bracci, Paige, McCoy, Lucie, Rice, Terri, Wiencke, John K., Eckel-Passow, Jeanette E., Jenkins, Robert B., Wrensch, Margaret, Francis, Stephen S.

Volltext

DNA Methylation, Isocitrate Dehydrogenase Mutation, and Survival in Glioma von CHRISTENSEN, Brock C, SMITH, Ashley A, KELSEY, Karl T, WIENCKE, John K, SHICHUN ZHENG, KOESTLER, Devin C, HOUSEMAN, E. Andres, MARSIT, Carmen J, WIEMELS, Joseph L, NELSON, Heather H, KARAGAS, Margaret R, WRENSCH, Margaret R

Volltext

Genetic and molecular epidemiology of adult diffuse glioma von Molinaro, Annette M., Taylor, Jennie W., Wiencke, John K., Wrensch, Margaret R.

Volltext

A global DNA methylation and gene expression analysis of early human B-cell development reveals a demethylation signature and transcription factor network von Lee, Seung-Tae, Xiao, Yuanyuan, Muench, Marcus O, Xiao, Jianqiao, Fomin, Marina E, Wiencke, John K, Zheng, Shichun, Dou, Xiaoqin, de Smith, Adam, Chokkalingam, Anand, Buffler, Patricia, Ma, Xiaomei, Wiemels, Joseph L

Volltext

The DNA methylation profile of activated human natural killer cells von Wiencke, John. K., Butler, Rondi, Hsuang, George, Eliot, Melissa, Kim, Stephanie, Sepulveda, Manuel A., Siegel, Derick, Houseman, E. Andres, Kelsey, Karl T.

Volltext

Hierarchical deconvolution for extensive cell type resolution in the human brain using DNA methylation von Zhang, Ze, Wiencke, John K, Kelsey, Karl T, Koestler, Devin C, Molinaro, Annette M, Pike, Steven C, Karra, Prasoona, Christensen, Brock C, Salas, Lucas A

Volltext

Breast cancer DNA methylation profiles are associated with tumor size and alcohol and folate intake von Christensen, Brock C, Kelsey, Karl T, Zheng, Shichun, Houseman, E Andres, Marsit, Carmen J, Wrensch, Margaret R, Wiemels, Joseph L, Nelson, Heather H, Karagas, Margaret R, Kushi, Lawrence H, Kwan, Marilyn L, Wiencke, John K

Volltext

Model-based clustering of DNA methylation array data: a recursive-partitioning algorithm for high-dimensional data arising as a mixture of beta distributions von Houseman, E Andres, Christensen, Brock C, Yeh, Ru-Fang, Marsit, Carmen J, Karagas, Margaret R, Wrensch, Margaret, Nelson, Heather H, Wiemels, Joseph, Zheng, Shichun, Wiencke, John K, Kelsey, Karl T

Volltext

Identification of a foetal epigenetic compartment in adult human kidney von Wiencke, John K., Zhang, Ze, Koestler, Devin C., Salas, Lucas A., Molinaro, Annette M., Christensen, Brock C., Kelsey, Karl T.

Volltext

Glioma immune microenvironment composition calculator (GIMiCC): a method of estimating the proportions of eighteen cell types from DNA methylation microarray data von Pike, Steven C, Wiencke, John K, Zhang, Ze, Molinaro, Annette M, Hansen, Helen M, Koestler, Devin C, Christensen, Brock C, Kelsey, Karl T, Salas, Lucas A

Volltext

Assessment of immune cell profiles among post-menopausal women in the Women's Health Initiative using DNA methylation-based methods von Nissen, Emily, Reiner, Alexander, Liu, Simin, Wallace, Robert B, Molinaro, Annette M, Salas, Lucas A, Christensen, Brock C, Wiencke, John K, Koestler, Devin C, Kelsey, Karl T

Volltext

Absence of an embryonic stem cell DNA methylation signature in human cancer von Zhang, Ze, Wiencke, John K, Koestler, Devin C, Salas, Lucas A, Christensen, Brock C, Kelsey, Karl T

Volltext