Highly multiplexed imaging of single cells using a high-throughput cyclic immunofluorescence method von Lin, Jia-Ren, Fallahi-Sichani, Mohammad, Sorger, Peter K.

Volltext

Adaptive resistance of melanoma cells to RAF inhibition via reversible induction of a slowly dividing de‐differentiated state von Fallahi‐Sichani, Mohammad, Becker, Verena, Izar, Benjamin, Baker, Gregory J, Lin, Jia‐Ren, Boswell, Sarah A, Shah, Parin, Rotem, Asaf, Garraway, Levi A, Sorger, Peter K

Volltext

Qualifying antibodies for image-based immune profiling and multiplexed tissue imaging von Du, Ziming, Lin, Jia-Ren, Rashid, Rumana, Maliga, Zoltan, Wang, Shu, Aster, Jon C., Izar, Benjamin, Sorger, Peter K., Santagata, Sandro

Volltext

Highly multiplexed immunofluorescence imaging of human tissues and tumors using t-CyCIF and conventional optical microscopes von Lin, Jia-Ren, Izar, Benjamin, Wang, Shu, Yapp, Clarence, Mei, Shaolin, Shah, Parin M, Santagata, Sandro, Sorger, Peter K

Volltext

Determinants of drug-target interactions at the single cell level von Elgart, Vlad, Lin, Jia-Ren, Loscalzo, Joseph

Volltext

Oncometabolite d-2HG alters T cell metabolism to impair CD8 + T cell function von Notarangelo, Giulia, Spinelli, Jessica B, Perez, Elizabeth M, Baker, Gregory J, Kurmi, Kiran, Elia, Ilaria, Stopka, Sylwia A, Baquer, Gerard, Lin, Jia-Ren, Golby, Alexandra J, Joshi, Shakchhi, Baron, Heide F, Drijvers, Jefte M, Georgiev, Peter, Ringel, Alison E, Zaganjor, Elma, McBrayer, Samuel K, Sorger, Peter K, Sharpe, Arlene H, Wucherpfennig, Kai W, Santagata, Sandro, Agar, Nathalie Y R, Suvà, Mario L, Haigis, Marcia C

Volltext

MCMICRO: a scalable, modular image-processing pipeline for multiplexed tissue imaging von Schapiro, Denis, Sokolov, Artem, Yapp, Clarence, Chen, Yu-An, Muhlich, Jeremy L., Hess, Joshua, Creason, Allison L., Nirmal, Ajit J., Baker, Gregory J., Nariya, Maulik K., Lin, Jia-Ren, Maliga, Zoltan, Jacobson, Connor A., Hodgman, Matthew W., Ruokonen, Juha, Farhi, Samouil L., Abbondanza, Domenic, McKinley, Eliot T., Persson, Daniel, Betts, Courtney, Sivagnanam, Shamilene, Regev, Aviv, Goecks, Jeremy, Coffey, Robert J., Coussens, Lisa M., Santagata, Sandro, Sorger, Peter K.

Volltext

LncRNA-NEF antagonized epithelial to mesenchymal transition and cancer metastasis via cis-regulating FOXA2 and inactivating Wnt/β-catenin signaling von Liang, Wei-Cheng, Ren, Jia-Lin, Wong, Cheuk-Wa, Chan, Sun-On, Waye, Mary Miu-Yee, Fu, Wei-Ming, Zhang, Jin-Fang

Volltext

A human breast atlas integrating single-cell proteomics and transcriptomics von Gray, G. Kenneth, Li, Carman Man-Chung, Rosenbluth, Jennifer M., Selfors, Laura M., Girnius, Nomeda, Lin, Jia-Ren, Schackmann, Ron C.J., Goh, Walter L., Moore, Kaitlin, Shapiro, Hana K., Mei, Shaolin, D’Andrea, Kurt, Nathanson, Katherine L., Sorger, Peter K., Santagata, Sandro, Regev, Aviv, Garber, Judy E., Dillon, Deborah A., Brugge, Joan S.

Volltext

Inferring reaction network structure from single-cell, multiplex data, using toric systems theory von Wang, Shu, Lin, Jia-Ren, Sontag, Eduardo D, Sorger, Peter K

Volltext

Dosage of Dyrk1a Shifts Cells within a p21-Cyclin D1 Signaling Map to Control the Decision to Enter the Cell Cycle von Chen, Jia-Yun, Lin, Jia-Ren, Tsai, Feng-Chiao, Meyer, Tobias

Volltext

Computational multiplex panel reduction to maximize information retention in breast cancer tissue microarrays von Ternes, Luke, Lin, Jia-Ren, Chen, Yu-An, Gray, Joe W, Chang, Young Hwan

Volltext

Temporal and spatial topography of cell proliferation in cancer von Gaglia, Giorgio, Kabraji, Sheheryar, Rammos, Danae, Dai, Yang, Verma, Ana, Wang, Shu, Mills, Caitlin E., Chung, Mirra, Bergholz, Johann S., Coy, Shannon, Lin, Jia-Ren, Jeselsohn, Rinath, Metzger, Otto, Winer, Eric P., Dillon, Deborah A., Zhao, Jean J., Sorger, Peter K., Santagata, Sandro

Volltext

Single cell spatial analysis reveals the topology of immunomodulatory purinergic signaling in glioblastoma von Coy, Shannon, Wang, Shu, Stopka, Sylwia A., Lin, Jia-Ren, Yapp, Clarence, Ritch, Cecily C., Salhi, Lisa, Baker, Gregory J., Rashid, Rumana, Baquer, Gerard, Regan, Michael, Khadka, Prasidda, Cole, Kristina A., Hwang, Jaeho, Wen, Patrick Y., Bandopadhayay, Pratiti, Santi, Mariarita, De Raedt, Thomas, Ligon, Keith L., Agar, Nathalie Y. R., Sorger, Peter K., Touat, Mehdi, Santagata, Sandro

Volltext

A Two-Dimensional ERK-AKT Signaling Code for an NGF-Triggered Cell-Fate Decision von Chen, Jia-Yun, Lin, Jia-Ren, Cimprich, Karlene A., Meyer, Tobias

Volltext

SHPRH and HLTF Act in a Damage-Specific Manner to Coordinate Different Forms of Postreplication Repair and Prevent Mutagenesis von Lin, Jia-Ren, Zeman, Michelle K., Chen, Jia-Yun, Yee, Muh-Ching, Cimprich, Karlene A.

Volltext

Highly multiplexed immunofluorescence images and single-cell data of immune markers in tonsil and lung cancer von Rashid, Rumana, Gaglia, Giorgio, Chen, Yu-An, Lin, Jia-Ren, Du, Ziming, Maliga, Zoltan, Schapiro, Denis, Yapp, Clarence, Muhlich, Jeremy, Sokolov, Artem, Sorger, Peter, Santagata, Sandro

Volltext

Scope2Screen: Focus+Context Techniques for Pathology Tumor Assessment in Multivariate Image Data von Jessup, Jared, Krueger, Robert, Warchol, Simon, Hoffer, John, Muhlich, Jeremy, Ritch, Cecily C., Gaglia, Giorgio, Coy, Shannon, Chen, Yu-An, Lin, Jia-Ren, Santagata, Sandro, Sorger, Peter K., Pfister, Hanspeter

Volltext

Bidirectional signals transduced by DAPK-ERK interaction promote the apoptotic effect of DAPK von Chen, Chun-Hau, Wang, Won-Jing, Kuo, Jean-Cheng, Tsai, Hsiao-Chien, Lin, Jia-Ren, Chang, Zee-Fen, Chen, Ruey-Hwa

Volltext

DNA damage-specific deubiquitination regulates Rad18 functions to suppress mutagenesis von Zeman, Michelle K, Lin, Jia-Ren, Freire, Raimundo, Cimprich, Karlene A

Volltext