Microbial interactions: from networks to models von Faust, Karoline, Raes, Jeroen

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CoNet app: inference of biological association networks using Cytoscape von Faust, Karoline, Raes, Jeroen

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The resilience of the intestinal microbiota influences health and disease von Sommer, Felix, Anderson, Jacqueline Moltzau, Bharti, Richa, Raes, Jeroen, Rosenstiel, Philip

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The Human Gut Microbiome: From Association to Modulation von Schmidt, Thomas S.B., Raes, Jeroen, Bork, Peer

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Temporal variability in quantitative human gut microbiome profiles and implications for clinical research von Vandeputte, Doris, De Commer, Lindsey, Tito, Raul Y., Kathagen, Gunter, Sabino, João, Vermeire, Séverine, Faust, Karoline, Raes, Jeroen

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Short chain fatty acids and its producing organisms: An overlooked therapy for IBD? von Deleu, Sara, Machiels, Kathleen, Raes, Jeroen, Verbeke, Kristin, Vermeire, Séverine

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Microbiology Meets Big Data: The Case of Gut Microbiota-Derived Trimethylamine von Falony, Gwen, Vieira-Silva, Sara, Raes, Jeroen

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Heterogeneity of the gut microbiome in mice: guidelines for optimizing experimental design von Laukens, Debby, Brinkman, Brigitta M., Raes, Jeroen, De Vos, Martine, Vandenabeele, Peter

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Prebiotic inulin-type fructans induce specific changes in the human gut microbiota von Vandeputte, Doris, Falony, Gwen, Vieira-Silva, Sara, Wang, Jun, Sailer, Manuela, Theis, Stephan, Verbeke, Kristin, Raes, Jeroen

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The neuroactive potential of the human gut microbiota in quality of life and depression von Valles-Colomer, Mireia, Falony, Gwen, Darzi, Youssef, Tigchelaar, Ettje F., Wang, Jun, Tito, Raul Y., Schiweck, Carmen, Kurilshikov, Alexander, Joossens, Marie, Wijmenga, Cisca, Claes, Stephan, Van Oudenhove, Lukas, Zhernakova, Alexandra, Vieira-Silva, Sara, Raes, Jeroen

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How informative is the mouse for human gut microbiota research? von Nguyen, Thi Loan Anh, Vieira-Silva, Sara, Liston, Adrian, Raes, Jeroen

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Multi-stability and the origin of microbial community types von Gonze, Didier, Lahti, Leo, Raes, Jeroen, Faust, Karoline

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Computational approaches to predict bacteriophage–host relationships von Edwards, Robert A., McNair, Katelyn, Faust, Karoline, Raes, Jeroen, Dutilh, Bas E.

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Practical considerations for large-scale gut microbiome studies von Vandeputte, Doris, Tito, Raul Y., Vanleeuwen, Rianne, Falony, Gwen, Raes, Jeroen

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Quantitative microbiome profiling links gut community variation to microbial load von Vandeputte, Doris, Kathagen, Gunter, D’hoe, Kevin, Vieira-Silva, Sara, Valles-Colomer, Mireia, Sabino, João, Wang, Jun, Tito, Raul Y., De Commer, Lindsey, Darzi, Youssef, Vermeire, Séverine, Falony, Gwen, Raes, Jeroen

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Synthetic ecology of the human gut microbiota von Vrancken, Gino, Gregory, Ann C., Huys, Geert R. B., Faust, Karoline, Raes, Jeroen

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Benchmarking microbiome transformations favors experimental quantitative approaches to address compositionality and sampling depth biases von Lloréns-Rico, Verónica, Vieira-Silva, Sara, Gonçalves, Pedro J., Falony, Gwen, Raes, Jeroen

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Brief Report: Dialister as a Microbial Marker of Disease Activity in Spondyloarthritis von Tito, Raul Y., Cypers, Heleen, Joossens, Marie, Varkas, Gaëlle, Van Praet, Liesbet, Glorieus, Elien, Van den Bosch, Filip, De Vos, Martine, Raes, Jeroen, Elewaut, Dirk

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Microbial co-occurrence relationships in the human microbiome von Faust, Karoline, Sathirapongsasuti, J Fah, Izard, Jacques, Segata, Nicola, Gevers, Dirk, Raes, Jeroen, Huttenhower, Curtis

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Tara Oceans: towards global ocean ecosystems biology von Sunagawa, Shinichi, Acinas, Silvia G., Bork, Peer, Bowler, Chris, Eveillard, Damien, Gorsky, Gabriel, Guidi, Lionel, Iudicone, Daniele, Karsenti, Eric, Lombard, Fabien, Ogata, Hiroyuki, Pesant, Stephane, Sullivan, Matthew B., Wincker, Patrick, de Vargas, Colomban

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