Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies von Ruffolo, Jeffrey A., Chu, Lee-Shin, Mahajan, Sai Pooja, Gray, Jeffrey J.

Volltext

Antibody structure prediction using interpretable deep learning von Ruffolo, Jeffrey A., Sulam, Jeremias, Gray, Jeffrey J.

Volltext

Simultaneous prediction of antibody backbone and side-chain conformations with deep learning von Akpinaroglu, Deniz, Ruffolo, Jeffrey A, Mahajan, Sai Pooja, Gray, Jeffrey J

Volltext

Hallucinating structure-conditioned antibody libraries for target-specific binders von Mahajan, Sai Pooja, Ruffolo, Jeffrey A, Frick, Rahel, Gray, Jeffrey J

Volltext

Toward enhancement of antibody thermostability and affinity by computational design in the absence of antigen von Hutchinson, Mark, Ruffolo, Jeffrey A, Haskins, Nantaporn, Iannotti, Michael, Vozza, Giuliana, Pham, Tony, Mehzabeen, Nurjahan, Shandilya, Harini, Rickert, Keith, Croasdale-Wood, Rebecca, Damschroder, Melissa, Fu, Ying, Dippel, Andrew, Gray, Jeffrey J, Kaplan, Gilad

Volltext

Designing proteins with language models von Ruffolo, Jeffrey A., Madani, Ali

Volltext

Geometric potentials from deep learning improve prediction of CDR H3 loop structures von Ruffolo, Jeffrey A, Guerra, Carlos, Mahajan, Sai Pooja, Sulam, Jeremias, Gray, Jeffrey J

Volltext

ProGen2: Exploring the boundaries of protein language models von Nijkamp, Erik, Ruffolo, Jeffrey A., Weinstein, Eli N., Naik, Nikhil, Madani, Ali

Volltext

Flexible protein–protein docking with a multitrack iterative transformer von Chu, Lee‐Shin, Ruffolo, Jeffrey A., Harmalkar, Ameya, Gray, Jeffrey J.

Volltext

IgLM: Infilling language modeling for antibody sequence design von Shuai, Richard W., Ruffolo, Jeffrey A., Gray, Jeffrey J.

Volltext

Modeling of lamprey reticulospinal neurons: multiple distinct parameter sets yield realistic simulations von Ruffolo, Jeffrey A., McClellan, Andrew D.

Volltext

Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies von Ruffolo, Jeffrey A., Gray, Jeffrey J.

Volltext

Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer von Chu, Lee-Shin, Ruffolo, Jeffrey A, Harmalkar, Ameya, Gray, Jeffrey J

Volltext

Simultaneous prediction of antibody backbone and side-chain conformations with deep learning von Deniz Akpinaroglu, Jeffrey A. Ruffolo, Sai Pooja Mahajan, Jeffrey J. Gray

Volltext

Conditional Enzyme Generation Using Protein Language Models with Adapters von Yang, Jason, Bhatnagar, Aadyot, Ruffolo, Jeffrey A, Madani, Ali

Volltext bestellen

Deciphering antibody affinity maturation with language models and weakly supervised learning von Ruffolo, Jeffrey A, Gray, Jeffrey J, Sulam, Jeremias

Volltext bestellen

Conditional Enzyme Generation Using Protein Language Models with Adapters von Yang, Jason, Bhatnagar, Aadyot, Ruffolo, Jeffrey A, Madani, Ali

Volltext

Nucleases and compositions, systems, and methods thereof von Beazer, Joel, Nayfach, Stephen, Bhatnagar, Aadyot, Madani, Ali, Ruffolo, Jeffrey A

Volltext bestellen

Deciphering antibody affinity maturation with language models and weakly supervised learning von Ruffolo, Jeffrey A, Gray, Jeffrey J, Sulam, Jeremias

Volltext

Predicted structures for comparison with IgFold von Ruffolo, Jeffrey A., Chu, Lee-Shin, Mahajan, Sai Pooja, Gray, Jeffrey J.

Volltext bestellen