Reconstructing A/B compartments as revealed by Hi-C using long-range correlations in epigenetic data von Fortin, Jean-Philippe, Hansen, Kasper D

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Harmonization of cortical thickness measurements across scanners and sites von Fortin, Jean-Philippe, Cullen, Nicholas, Sheline, Yvette I., Taylor, Warren D., Aselcioglu, Irem, Cook, Philip A., Adams, Phil, Cooper, Crystal, Fava, Maurizio, McGrath, Patrick J., McInnis, Melvin, Phillips, Mary L., Trivedi, Madhukar H., Weissman, Myrna M., Shinohara, Russell T.

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Harmonization of multi-site diffusion tensor imaging data von Fortin, Jean-Philippe, Parker, Drew, Tunç, Birkan, Watanabe, Takanori, Elliott, Mark A., Ruparel, Kosha, Roalf, David R., Satterthwaite, Theodore D., Gur, Ruben C., Gur, Raquel E., Schultz, Robert T., Verma, Ragini, Shinohara, Russell T.

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A comprehensive Bioconductor ecosystem for the design of CRISPR guide RNAs across nucleases and technologies von Hoberecht, Luke, Perampalam, Pirunthan, Lun, Aaron, Fortin, Jean-Philippe

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Functional normalization of 450k methylation array data improves replication in large cancer studies von Fortin, Jean-Philippe, Labbe, Aurélie, Lemire, Mathieu, Zanke, Brent W, Hudson, Thomas J, Fertig, Elana J, Greenwood, Celia Mt, Hansen, Kasper D

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Integrated digital pathology and transcriptome analysis identifies molecular mediators of T-cell exclusion in ovarian cancer von Desbois, Mélanie, Udyavar, Akshata R., Ryner, Lisa, Kozlowski, Cleopatra, Guan, Yinghui, Dürrbaum, Milena, Lu, Shan, Fortin, Jean-Philippe, Koeppen, Hartmut, Ziai, James, Chang, Ching-Wei, Keerthivasan, Shilpa, Plante, Marie, Bourgon, Richard, Bais, Carlos, Hegde, Priti, Daemen, Anneleen, Turley, Shannon, Wang, Yulei

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Bradykinin receptors: Agonists, antagonists, expression, signaling, and adaptation to sustained stimulation von Marceau, François, Bachelard, Hélène, Bouthillier, Johanne, Fortin, Jean-Philippe, Morissette, Guillaume, Bawolak, Marie-Thérèse, Charest-Morin, Xavier, Gera, Lajos

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Removing inter-subject technical variability in magnetic resonance imaging studies von Fortin, Jean-Philippe, Sweeney, Elizabeth M., Muschelli, John, Crainiceanu, Ciprian M., Shinohara, Russell T.

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CRISPR activation screens identify the SWI/SNF ATPases as suppressors of ferroptosis von Bhat, Kamakoti P., Vijay, Jinchu, Vilas, Caroline K., Asundi, Jyoti, Zou, Jun, Lau, Ted, Cai, Xiaoyu, Ahmed, Musaddeque, Kabza, Michal, Weng, Julie, Fortin, Jean-Philippe, Lun, Aaron, Durinck, Steffen, Hafner, Marc, Costa, Michael R., Ye, Xin

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Human splicing diversity and the extent of unannotated splice junctions across human RNA-seq samples on the Sequence Read Archive von Nellore, Abhinav, Jaffe, Andrew E, Fortin, Jean-Philippe, Alquicira-Hernández, José, Collado-Torres, Leonardo, Wang, Siruo, Phillips, III, Robert A, Karbhari, Nishika, Hansen, Kasper D, Langmead, Ben, Leek, Jeffrey T

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Multiple-gene targeting and mismatch tolerance can confound analysis of genome-wide pooled CRISPR screens von Fortin, Jean-Philippe, Tan, Jenille, Gascoigne, Karen E, Haverty, Peter M, Forrest, William F, Costa, Michael R, Martin, Scott E

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Preprocessing, normalization and integration of the Illumina HumanMethylationEPIC array with minfi von Fortin, Jean-Philippe, Triche, Jr, Timothy J, Hansen, Kasper D

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Roadmap for the use of base editors to decipher drug mechanism of action von Aparicio-Prat, Estel, Yan, Dong, Mariotti, Marco, Bassik, Michael, Hess, Gaelen, Fortin, Jean-Philippe, Weston, Andrea, Xi, Hualin S, Stanton, Robert

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An inverse agonist of orphan receptor GPR61 acts by a G protein-competitive allosteric mechanism von Lees, Joshua A., Dias, João M., Rajamohan, Francis, Fortin, Jean-Philippe, O’Connor, Rebecca, Kong, Jimmy X., Hughes, Emily A. G., Fisher, Ethan L., Tuttle, Jamison B., Lovett, Gabrielle, Kormos, Bethany L., Unwalla, Rayomand J., Zhang, Lei, Dechert Schmitt, Anne-Marie, Zhou, Dahui, Moran, Michael, Stevens, Kimberly A., Fennell, Kimberly F., Varghese, Alison E., Maxwell, Andrew, Cote, Emmaline E., Zhang, Yuan, Han, Seungil

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Chronic UCN2 treatment desensitizes CRHR2 and improves insulin sensitivity von Flaherty, Stephen E., Bezy, Olivier, Zheng, Wei, Yan, Dong, Li, Xiangping, Jagarlapudi, Srinath, Albuquerque, Bina, Esquejo, Ryan M., Peloquin, Matthew, Semache, Meriem, Mancini, Arturo, Kang, Liya, Drujan, Doreen, Breitkopf, Susanne B., Griffin, John D., Jean Beltran, Pierre M., Xue, Liang, Stansfield, John, Pashos, Evanthia, Shakey, Quazi, Pehmøller, Christian, Monetti, Mara, Birnbaum, Morris J., Fortin, Jean-Philippe, Wu, Zhidan

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A potentiator of orthosteric ligand activity at GLP-1R acts via covalent modification von Nolte, Whitney M, Fortin, Jean-Philippe, Stevens, Benjamin D, Aspnes, Gary E, Griffith, David A, Hoth, Lise R, Ruggeri, Roger B, Mathiowetz, Alan M, Limberakis, Chris, Hepworth, David, Carpino, Philip A

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shinyMethyl: interactive quality control of Illumina 450k DNA methylation arrays in R [version 2; peer review: 2 approved] von Fortin, Jean-Philippe, Fertig, Elana, Hansen, Kasper

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Pharmacological Characterization of Human Incretin Receptor Missense Variants von Fortin, Jean-Philippe, Schroeder, Jonathan C., Zhu, Yuantee, Beinborn, Martin, Kopin, Alan S.

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Selective activation of Gs signaling in adipocytes causes striking metabolic improvements in mice von Wang, Lei, Pydi, Sai P., Cui, Yinghong, Zhu, Lu, Meister, Jaroslawna, Gavrilova, Oksana, Berdeaux, Rebecca, Fortin, Jean-Philippe, Bence, Kendra K., Vernochet, Cecile, Wess, Jürgen

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Development of an OP9 derived cell line as a robust model to rapidly study adipocyte differentiation von Lane, Jacqueline M, Doyle, Jamie R, Fortin, Jean-Philippe, Kopin, Alan S, Ordovás, José M

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