ProBiS-Fold Approach for Annotation of Human Structures from the AlphaFold Database with No Corresponding Structure in the PDB to Discover New Druggable Binding Sites von Konc, Janez, Janežič, Dušanka

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ProBiS algorithm for detection of structurally similar protein binding sites by local structural alignment von Konc, Janez, Janežič, Dušanka

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GenProBiS: web server for mapping of sequence variants to protein binding sites von Konc, Janez, Skrlj, Blaz, Erzen, Nika, Kunej, Tanja, Janezic, Dusanka

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ProBiS-ligands: a web server for prediction of ligands by examination of protein binding sites von Konc, Janez, Janežič, Dušanka

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Ensemble Docking Coupled to Linear Interaction Energy Calculations for Identification of Coronavirus Main Protease (3CL(pro)) Non-Covalent Small-Molecule Inhibitors von Jukic, Marko, Janezic, Dusanka, Bren, Urban

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Protein−Protein Binding Site Prediction by Local Structural Alignment von Carl, Nejc, Konc, Janez, Vehar, Blaž, Janežič, Dušanka

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Identification of Conserved Water Sites in Protein Structures for Drug Design von Jukič, Marko, Konc, Janez, Gobec, Stanislav, Janežič, Dušanka

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Discovery of Novel Potential Human Targets of Resveratrol by Inverse Molecular Docking von Kores, Katarina, Lešnik, Samo, Bren, Urban, Janežič, Dušanka, Konc, Janez

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Binding site comparison for function prediction and pharmaceutical discovery von Konc, Janez, Janežič, Dušanka

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Ellipticines and 9-acridinylamines as inhibitors of d-alanine:d-alanine ligase von Vehar, Blaž, Hrast, Martina, Kovač, Andreja, Konc, Janez, Mariner, Katherine, Chopra, Ian, O’Neill, Alex, Janežič, Dušanka, Gobec, Stanislav

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Potential Novel Thioether-Amide or Guanidine-Linker Class of SARS-CoV-2 Virus RNA-Dependent RNA Polymerase Inhibitors Identified by High-Throughput Virtual Screening Coupled to Fre... von Jukic, Marko, Janezic, Dusanka, Bren, Urban

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ProBiS-Dock Database: A Web Server and Interactive Web Repository of Small Ligand–Protein Binding Sites for Drug Design von Konc, Janez, Lešnik, Samo, Škrlj, Blaž, Janežič, Dušanka

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Correlating Protein Hot Spot Surface Analysis Using ProBiS with Simulated Free Energies of Protein–Protein Interfacial Residues von Carl, Nejc, Hodošček, Milan, Vehar, Blaž, Konc, Janez, Brooks, Bernard R, Janežič, Dušanka

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Protein binding sites for drug design von Konc, Janez, Janežič, Dušanka

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An exact algorithm to find a maximum weight clique in a weighted undirected graph von Rozman, Kati, Ghysels, An, Janežič, Dušanka, Konc, Janez

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ProBiS tools (algorithm, database, and web servers) for predicting and modeling of biologically interesting proteins von Konc, Janez, Janežič, Dušanka

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ProBiS-2012: web server and web services for detection of structurally similar binding sites in proteins von Konc, Janez, Janezic, Dusanka

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ProBiS: a web server for detection of structurally similar protein binding sites von Konc, Janez, Janežič, Dušanka

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Individual degrees of freedom and the solvation properties of water von Bren, Urban, Janežič, Dušanka

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LiSiCA: A Software for Ligand-Based Virtual Screening and Its Application for the Discovery of Butyrylcholinesterase Inhibitors von Lešnik, Samo, Štular, Tanja, Brus, Boris, Knez, Damijan, Gobec, Stanislav, Janežič, Dušanka, Konc, Janez

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