Criteria for Inference of Chromothripsis in Cancer Genomes von Korbel, Jan O., Campbell, Peter J.

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Effects of the COVID-19 pandemic on life scientists von Korbel, Jan O, Stegle, Oliver

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Highly rearranged chromosomes reveal uncoupling between genome topology and gene expression von Ghavi-Helm, Yad, Jankowski, Aleksander, Meiers, Sascha, Viales, Rebecca R., Korbel, Jan O., Furlong, Eileen E. M.

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Phenotypic impact of genomic structural variation: insights from and for human disease von Weischenfeldt, Joachim, Symmons, Orsolya, Spitz, François, Korbel, Jan O.

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DELLY: structural variant discovery by integrated paired-end and split-read analysis von Rausch, Tobias, Zichner, Thomas, Schlattl, Andreas, Stütz, Adrian M, Benes, Vladimir, Korbel, Jan O

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Shadow Enhancers Are Pervasive Features of Developmental Regulatory Networks von Cannavò, Enrico, Khoueiry, Pierre, Garfield, David A., Geeleher, Paul, Zichner, Thomas, Gustafson, E. Hilary, Ciglar, Lucia, Korbel, Jan O., Furlong, Eileen E.M.

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An integrated map of structural variation in 2,504 human genomes von Sudmant, Peter H., Rausch, Tobias, Gardner, Eugene J., Handsaker, Robert E., Abyzov, Alexej, Huddleston, John, Zhang, Yan, Ye, Kai, Jun, Goo, Hsi-Yang Fritz, Markus, Konkel, Miriam K., Malhotra, Ankit, Stütz, Adrian M., Shi, Xinghua, Paolo Casale, Francesco, Chen, Jieming, Hormozdiari, Fereydoun, Dayama, Gargi, Chen, Ken, Malig, Maika, Chaisson, Mark J. P., Walter, Klaudia, Meiers, Sascha, Kashin, Seva, Garrison, Erik, Auton, Adam, Lam, Hugo Y. K., Jasmine Mu, Xinmeng, Alkan, Can, Antaki, Danny, Bae, Taejeong, Cerveira, Eliza, Chines, Peter, Chong, Zechen, Clarke, Laura, Dal, Elif, Ding, Li, Emery, Sarah, Fan, Xian, Gujral, Madhusudan, Kahveci, Fatma, Kidd, Jeffrey M., Kong, Yu, Lameijer, Eric-Wubbo, McCarthy, Shane, Flicek, Paul, Gibbs, Richard A., Marth, Gabor, Mason, Christopher E., Menelaou, Androniki, Muzny, Donna M., Nelson, Bradley J., Noor, Amina, Parrish, Nicholas F., Pendleton, Matthew, Quitadamo, Andrew, Raeder, Benjamin, Schadt, Eric E., Romanovitch, Mallory, Schlattl, Andreas, Sebra, Robert, Shabalin, Andrey A., Untergasser, Andreas, Walker, Jerilyn A., Wang, Min, Yu, Fuli, Zhang, Chengsheng, Zhang, Jing, Zheng-Bradley, Xiangqun, Zhou, Wanding, Zichner, Thomas, Sebat, Jonathan, Batzer, Mark A., McCarroll, Steven A., Mills, Ryan E., Gerstein, Mark B., Bashir, Ali, Stegle, Oliver, Devine, Scott E., Lee, Charles, Eichler, Evan E., Korbel, Jan O.

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Exome sequencing of osteosarcoma reveals mutation signatures reminiscent of BRCA deficiency von Kovac, Michal, Blattmann, Claudia, Ribi, Sebastian, Smida, Jan, Mueller, Nikola S., Engert, Florian, Castro-Giner, Francesc, Weischenfeldt, Joachim, Kovacova, Monika, Krieg, Andreas, Andreou, Dimosthenis, Tunn, Per-Ulf, Dürr, Hans Roland, Rechl, Hans, Schaser, Klaus-Dieter, Melcher, Ingo, Burdach, Stefan, Kulozik, Andreas, Specht, Katja, Heinimann, Karl, Fulda, Simone, Bielack, Stefan, Jundt, Gernot, Tomlinson, Ian, Korbel, Jan O., Nathrath, Michaela, Baumhoer, Daniel

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Genomics: data sharing needs an international code of conduct von Phillips, Mark, Molnár-Gábor, Fruzsina, Korbel, Jan O., Thorogood, Adrian, Joly, Yann, Chalmers, Don, Townend, David, Knoppers, Bartha M.

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Dense and accurate whole-chromosome haplotyping of individual genomes von Porubsky, David, Garg, Shilpa, Sanders, Ashley D., Korbel, Jan O., Guryev, Victor, Lansdorp, Peter M., Marschall, Tobias

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Negative Selection and Chromosome Instability Induced by Mad2 Overexpression Delay Breast Cancer but Facilitate Oncogene-Independent Outgrowth von Rowald, Konstantina, Mantovan, Martina, Passos, Joana, Buccitelli, Christopher, Mardin, Balca R., Korbel, Jan O., Jechlinger, Martin, Sotillo, Rocio

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Acquisition of chromosome instability is a mechanism to evade oncogene addiction von Salgueiro, Lorena, Buccitelli, Christopher, Rowald, Konstantina, Somogyi, Kalman, Kandala, Sridhar, Korbel, Jan O, Sotillo, Rocio

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Genomic data sharing in Europe is stumbling—Could a code of conduct prevent its fall? von Molnár‐Gábor, Fruzsina, Korbel, Jan O

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Systems approaches identify the consequences of monosomy in somatic human cells von Chunduri, Narendra Kumar, Menges, Paul, Zhang, Xiaoxiao, Wieland, Angela, Gotsmann, Vincent Leon, Mardin, Balca R., Buccitelli, Christopher, Korbel, Jan O., Willmund, Felix, Kschischo, Maik, Raeschle, Markus, Storchova, Zuzana

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Variation in Transcription Factor Binding among Humans von Kasowski, Maya, Grubert, Fabian, Heffelfinger, Christopher, Hariharan, Manoj, Asabere, Akwasi, Waszak, Sebastian M., Habegger, Lukas, Rozowsky, Joel, Shi, Minyi, Urban, Alexander E., Hong, Mi-Young, Karczewski, Konrad J., Huber, Wolfgang, Weissman, Sherman M., Gerstein, Mark B., Korbel, Jan O., Snyder, Michael

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A scalable CRISPR/Cas9-based fluorescent reporter assay to study DNA double-strand break repair choice von Roidos, Paris, Sungalee, Stephanie, Benfatto, Salvatore, Serçin, Özdemirhan, Stütz, Adrian M., Abdollahi, Amir, Mauer, Jan, Zenke, Frank T., Korbel, Jan O., Mardin, Balca R.

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Pan-cancer analysis distinguishes transcriptional changes of aneuploidy from proliferation von Buccitelli, Christopher, Salgueiro, Lorena, Rowald, Konstantina, Sotillo, Rocio, Mardin, Balca R, Korbel, Jan O

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What is a gene, post-ENCODE? History and updated definition von Gerstein, Mark B, Bruce, Can, Rozowsky, Joel S, Zheng, Deyou, Du, Jiang, Korbel, Jan O, Emanuelsson, Olof, Zhang, Zhengdong D, Weissman, Sherman, Snyder, Michael

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A cell‐based model system links chromothripsis with hyperploidy von Mardin, Balca R, Drainas, Alexandros P, Waszak, Sebastian M, Weischenfeldt, Joachim, Isokane, Mayumi, Stütz, Adrian M, Raeder, Benjamin, Efthymiopoulos, Theocharis, Buccitelli, Christopher, Segura‐Wang, Maia, Northcott, Paul, Pfister, Stefan M, Lichter, Peter, Ellenberg, Jan, Korbel, Jan O

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Inversion polymorphism in a complete human genome assembly von Porubsky, David, Harvey, William T, Rozanski, Allison N, Ebler, Jana, Höps, Wolfram, Ashraf, Hufsah, Hasenfeld, Patrick, Paten, Benedict, Sanders, Ashley D, Marschall, Tobias, Korbel, Jan O, Eichler, Evan E

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