Spatial registration of serial microscopic brain images to three-dimensional reference atlases with the QuickNII tool von Puchades, Maja A, Csucs, Gergely, Ledergerber, Debora, Leergaard, Trygve B, Bjaalie, Jan G

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Waxholm Space atlas of the Sprague Dawley rat brain von Papp, Eszter A., Leergaard, Trygve B., Calabrese, Evan, Johnson, G. Allan, Bjaalie, Jan G.

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The Human Brain Project-Synergy between neuroscience, computing, informatics, and brain-inspired technologies von Amunts, Katrin, Knoll, Alois C, Lippert, Thomas, Pennartz, Cyriel M A, Ryvlin, Philippe, Destexhe, Alain, Jirsa, Viktor K, D'Angelo, Egidio, Bjaalie, Jan G

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The topography of corticopontine projections is controlled by postmitotic expression of the area-mapping gene Nr2f1 von Tocco, Chiara, Øvsthus, Martin, Bjaalie, Jan G, Leergaard, Trygve B, Studer, Michèle

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Quantitative histological validation of diffusion MRI fiber orientation distributions in the rat brain von Leergaard, Trygve B, White, Nathan S, de Crespigny, Alex, Bolstad, Ingeborg, D'Arceuil, Helen, Bjaalie, Jan G, Dale, Anders M

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DeepSlice: rapid fully automatic registration of mouse brain imaging to a volumetric atlas von Carey, Harry, Pegios, Michael, Martin, Lewis, Saleeba, Chris, Turner, Anita J., Everett, Nicholas A., Bjerke, Ingvild E., Puchades, Maja A., Bjaalie, Jan G., McMullan, Simon

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Nutil: A Pre- and Post-processing Toolbox for Histological Rodent Brain Section Images von Groeneboom, Nicolaas E., Yates, Sharon C., Puchades, Maja A., Bjaalie, Jan G.

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Waxholm Space atlas of the rat brain hippocampal region: Three-dimensional delineations based on magnetic resonance and diffusion tensor imaging von Kjonigsen, Lisa J., Lillehaug, Sveinung, Bjaalie, Jan G., Witter, Menno P., Leergaard, Trygve B.

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The International Brain Initiative: enabling collaborative science von Quaglio, Gianluca, Toia, Patrizia, Moser, Edvard I, Karapiperis, Theodoros, Amunts, Katrin, Okabe, Shigeo, Poo, Mu-ming, Rah, Jong-Cheol, Koninck, Yves De, Ngai, John, Richards, Linda, Bjaalie, Jan G

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A three-plane architectonic atlas of the rat hippocampal region von Boccara, Charlotte N., Kjonigsen, Lisa J., Hammer, Ingvild M., Bjaalie, Jan G., Leergaard, Trygve B., Witter, Menno P.

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QUINT: Workflow for Quantification and Spatial Analysis of Features in Histological Images From Rodent Brain von Yates, Sharon C, Groeneboom, Nicolaas E, Coello, Christopher, Lichtenthaler, Stefan F, Kuhn, Peer-Hendrik, Demuth, Hans-Ulrich, Hartlage-Rübsamen, Maike, Roßner, Steffen, Leergaard, Trygve, Kreshuk, Anna, Puchades, Maja A, Bjaalie, Jan G

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Anatomical landmarks for registration of experimental image data to volumetric rodent brain atlasing templates von Sergejeva, Marina, Papp, Eszter A., Bakker, Rembrandt, Gaudnek, Manuel A., Okamura-Oho, Yuko, Boline, Jyl, Bjaalie, Jan G., Hess, Andreas

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3D Atlas of the Pituitary Gland of the Model Fish Medaka ( Oryzias latipes ) von Royan, Muhammad Rahmad, Siddique, Khadeeja, Csucs, Gergely, Puchades, Maja A, Nourizadeh-Lillabadi, Rasoul, Bjaalie, Jan G, Henkel, Christiaan V, Weltzien, Finn-Arne, Fontaine, Romain

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Editorial: APPNING: Animal Population Imaging von Dojat, Michel, Bjaalie, Jan G., Barbier, Emmanuel L.

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Atlas-based data integration for mapping the connections and architecture of the brain von Leergaard, Trygve B., Bjaalie, Jan G.

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The efferent connections of the orbitofrontal, posterior parietal, and insular cortex of the rat brain von Reiten, Ingrid, Olsen, Grethe M., Bjaalie, Jan G., Witter, Menno P., Leergaard, Trygve B.

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Densities and numbers of calbindin and parvalbumin positive neurons across the rat and mouse brain von Bjerke, Ingvild E., Yates, Sharon C., Laja, Arthur, Witter, Menno P., Puchades, Maja A., Bjaalie, Jan G., Leergaard, Trygve B.

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Spatially integrated cortico-subcortical tracing data for analyses of rodent brain topographical organization von Øvsthus, Martin, van Swieten, Maaike M. H., Puchades, Maja A., Tocco, Chiara, Studer, Michèle, Bjaalie, Jan G., Leergaard, Trygve B.

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Three-Dimensional Histology Volume Reconstruction of Axonal Tract Tracing Data: Exploring Topographical Organization in Subcortical Projections from Rat Barrel Cortex von Zakiewicz, Izabela M, Majka, Piotr, Wójcik, Daniel K, Bjaalie, Jan G, Leergaard, Trygve B

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A neuroscientist's guide to using murine brain atlases for efficient analysis and transparent reporting von Kleven, Heidi, Reiten, Ingrid, Blixhavn, Camilla H, Schlegel, Ulrike, Øvsthus, Martin, Papp, Eszter A, Puchades, Maja A, Bjaalie, Jan G, Leergaard, Trygve B, Bjerke, Ingvild E

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