Test sensitivity is secondary to frequency and turnaround time for COVID-19 screening von Larremore, Daniel B, Wilder, Bryan, Lester, Evan, Shehata, Soraya, Burke, James M, Hay, James A, Tambe, Milind, Mina, Michael J, Parker, Roy

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Practical considerations for measuring the effective reproductive number, Rt von Gostic, Katelyn M., McGough, Lauren, Baskerville, Edward B., Abbott, Sam, Joshi, Keya, Tedijanto, Christine, Kahn, Rebecca, Niehus, Rene, Hay, James A., De Salazar, Pablo M., Hellewell, Joel, Meakin, Sophie, Munday, James D., Bosse, Nikos, Sherrat, Katharine, Thompson, Robin N., White, Laura F., Huisman, Jana S., Scire, Jeremie, Bonhoeffer, Sebastian, Stadler, Tanja, Wallinga, Jacco, Funk, Sebastian, Lipsitch, Marc, Cobey, Sarah

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serosim: An R package for simulating serological data arising from vaccination, epidemiological and antibody kinetics processes von Menezes, Arthur, Takahashi, Saki, Routledge, Isobel, Metcalf, C Jessica E, Graham, Andrea L, Hay, James A

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Reconstructed influenza A/H3N2 infection histories reveal variation in incidence and antibody dynamics over the life course von Hay, James A, Zhu, Huachen, Jiang, Chao Qiang, Kwok, Kin On, Shen, Ruiyin, Kucharski, Adam, Yang, Bingyi, Read, Jonathan M, Lessler, Justin, Cummings, Derek A T, Riley, Steven

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Characterising antibody kinetics from multiple influenza infection and vaccination events in ferrets von Hay, James A, Laurie, Karen, White, Michael, Riley, Steven

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Quantifying the impact of immune history and variant on SARS-CoV-2 viral kinetics and infection rebound: A retrospective cohort study von Hay, James A, Kissler, Stephen M, Fauver, Joseph R, Mack, Christina, Tai, Caroline G, Samant, Radhika M, Connolly, Sarah, Anderson, Deverick J, Khullar, Gaurav, MacKay, Matthew, Patel, Miral, Kelly, Shannan, Manhertz, April, Eiter, Isaac, Salgado, Daisy, Baker, Tim, Howard, Ben, Dudley, Joel T, Mason, Christopher E, Nair, Manoj, Huang, Yaoxing, DiFiori, John, Ho, David D, Grubaugh, Nathan D, Grad, Yonatan H

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Viral kinetics of sequential SARS-CoV-2 infections von Kissler, Stephen M., Hay, James A., Fauver, Joseph R., Mack, Christina, Tai, Caroline G., Anderson, Deverick J., Ho, David D., Grubaugh, Nathan D., Grad, Yonatan H.

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Estimating internationally imported cases during the early COVID-19 pandemic von Menkir, Tigist F., Chin, Taylor, Hay, James A., Surface, Erik D., De Salazar, Pablo M., Buckee, Caroline O., Watts, Alexander, Khan, Kamran, Sherbo, Ryan, Yan, Ada W. C., Mina, Michael J., Lipsitch, Marc, Niehus, Rene

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Potential inconsistencies in Zika surveillance data and our understanding of risk during pregnancy von Hay, James A, Nouvellet, Pierre, Donnelly, Christl A, Riley, Steven

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Life course exposures continually shape antibody profiles and risk of seroconversion to influenza von Yang, Bingyi, Lessler, Justin, Zhu, Huachen, Jiang, Chao Qiang, Read, Jonathan M., Hay, James A., Kwok, Kin On, Shen, Ruiyin, Guan, Yi, Riley, Steven, Cummings, Derek A. T.

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An open source tool to infer epidemiological and immunological dynamics from serological data: serosolver von Hay, James A., Minter, Amanda, Ainslie, Kylie E. C., Lessler, Justin, Yang, Bingyi, Cummings, Derek A. T., Kucharski, Adam J., Riley, Steven

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Correction: Practical considerations for measuring the effective reproductive number, Rt von Gostic, Katelyn M, McGough, Lauren, Baskerville, Edward B, Abbott, Sam, Joshi, Keya, Tedijanto, Christine, Kahn, Rebecca, Niehus, Rene, Hay, James A, De Salazar, Pablo M, Hellewell, Joel, Meakin, Sophie, Munday, James D, Bosse, Nikos I, Sherrat, Katharine, Thompson, Robin N, White, Laura F, Huisman, Jana S, Scire, Jérémie, Bonhoeffer, Sebastian, Stadler, Tanja, Wallinga, Jacco, Funk, Sebastian, Lipsitch, Marc, Cobey, Sarah

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Near real-time surveillance of the SARS-CoV-2 epidemic with incomplete data von De Salazar, Pablo M, Lu, Fred, Hay, James A, Gómez-Barroso, Diana, Fernández-Navarro, Pablo, Martínez, Elena V, Astray-Mochales, Jenaro, Amillategui, Rocío, García-Fulgueiras, Ana, Chirlaque, Maria D, Sánchez-Migallón, Alonso, Larrauri, Amparo, Sierra, María J, Lipsitch, Marc, Simón, Fernando, Santillana, Mauricio, Hernán, Miguel A

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Long term intrinsic cycling in human life course antibody responses to influenza A(H3N2): an observational and modeling study von Yang, Bingyi, García-Carreras, Bernardo, Lessler, Justin, Read, Jonathan M, Zhu, Huachen, Metcalf, C Jessica E, Hay, James A, Kwok, Kin O, Shen, Ruiyun, Jiang, Chao Q, Guan, Yi, Riley, Steven, Cummings, Derek A

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Estimating epidemiologic dynamics from cross-sectional viral load distributions von Hay, James A., Kennedy-Shaffer, Lee, Kanjilal, Sanjat, Lennon, Niall J., Gabriel, Stacey B., Lipsitch, Marc, Mina, Michael J.

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When intuition falters: repeated testing accuracy during an epidemic von Hay, James A., Hellewell, Joel, Qiu, Xueting

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Estimation of Transmission of COVID-19 in Simulated Nursing Homes With Frequent Testing and Immunity-Based Staffing von Holmdahl, Inga, Kahn, Rebecca, Hay, James A., Buckee, Caroline O., Mina, Michael J.

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Estimation of Seasonal Influenza Attack Rates and Antibody Dynamics in Children Using Cross-Sectional Serological Data von Minter, Amanda, Hoschler, Katja, Jagne, Ya Jankey, Sallah, Hadijatou, Armitage, Edwin, Lindsey, Benjamin, Hay, James A, Riley, Steven, de Silva, Thushan I, Kucharski, Adam J

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COVID-19 testing and reporting behaviours in England across different sociodemographic groups: a population-based study using testing data and data from community prevalence survei... von Bajaj, Sumali, Chen, Siyu, Creswell, Richard, Naidoo, Reshania, Tsui, Joseph L-H, Kolade, Olumide, Nicholson, George, Lehmann, Brieuc, Hay, James A, Kraemer, Moritz U G, Aguas, Ricardo, Donnelly, Christl A, Fowler, Tom, Hopkins, Susan, Cantrell, Liberty, Dahal, Prabin, White, Lisa J, Stepniewska, Kasia, Voysey, Merryn, Lambert, Ben, Aguas, Ricardo, Amswych, Ma'ayan, Andersen-Waine, Billie, Bajaj, Sumali, Bimpong, Kweku, Bodley, Adam, Cantrell, Liberty, Chen, Siyu, Creswell, Richard, Dahal, Prabin, Dickinson, Sophie, Dittrich, Sabine, Evans, Tracy, Ferguson-Lewis, Angus, Franco, Caroline, Gao, Bo, Hounsell, Rachel, Kasim, Muhammad, Keene, Claire, Lambert, Ben, Mahmood, Umar, Mills, Melinda, Moldokmatova, Ainura, Molyneux, Sassy, Naidoo, Reshania, Ngwafor Anye, Randolph, Norman, Jared, Pan-Ngum, Wirichada, Pokharel, Sunil, Polner, Anastasiia, Rowe, Emily, Saralamba, Sompob, Shretta, Rima, Silal, Sheetal, Stepniewska, Kasia, L-H Tsui, Joseph, Voysey, Merryn, Wanat, Marta, White, Lisa J

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Infectious disease surveillance needs for the United States: lessons from Covid-19 von Lipsitch, Marc, Bassett, Mary T, Brownstein, John S, Elliott, Paul, Eyre, David, Grabowski, M Kate, Hay, James A, Johansson, Michael A, Kissler, Stephen M, Larremore, Daniel B, Layden, Jennifer E, Lessler, Justin, Lynfield, Ruth, MacCannell, Duncan, Madoff, Lawrence C, Metcalf, C Jessica E, Meyers, Lauren A, Ofori, Sylvia K, Quinn, Celia, Bento, Ana I, Reich, Nicholas G, Riley, Steven, Rosenfeld, Roni, Samore, Matthew H, Sampath, Rangarajan, Slayton, Rachel B, Swerdlow, David L, Truelove, Shaun, Varma, Jay K, Grad, Yonatan H

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