Metabolic flexibility of enigmatic SAR324 revealed through metagenomics and metatranscriptomics von Sheik, Cody S., Jain, Sunit, Dick, Gregory J.

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Robust variation in infant gut microbiome assembly across a spectrum of lifestyles von Olm, Matthew R, Dahan, Dylan, Carter, Matthew M, Merrill, Bryan D, Yu, Feiqiao B, Jain, Sunit, Meng, Xiandong, Tripathi, Surya, Wastyk, Hannah, Neff, Norma, Holmes, Susan, Sonnenburg, Erica D, Jha, Aashish R, Sonnenburg, Justin L

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Genomic and transcriptomic evidence for scavenging of diverse organic compounds by widespread deep-sea archaea von Li, Meng, Baker, Brett J., Anantharaman, Karthik, Jain, Sunit, Breier, John A., Dick, Gregory J.

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Identification and analysis of the bacterial endosymbiont specialized for production of the chemotherapeutic natural product ET-743 von Schofield, Michael M., Jain, Sunit, Porat, Daphne, Dick, Gregory J., Sherman, David H.

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Genomic and Transcriptomic Resolution of Organic Matter Utilization Among Deep-Sea Bacteria in Guaymas Basin Hydrothermal Plumes von Li, Meng, Jain, Sunit, Dick, Gregory J

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The metatranscriptome of a deep-sea hydrothermal plume is dominated by water column methanotrophs and lithotrophs von Lesniewski, Ryan A, Jain, Sunit, Anantharaman, Karthik, Schloss, Patrick D, Dick, Gregory J

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Airborne Bacteria in Earth's Lower Stratosphere Resemble Taxa Detected in the Troposphere: Results From a New NASA Aircraft Bioaerosol Collector (ABC) von Smith, David J, Ravichandar, Jayamary Divya, Jain, Sunit, Griffin, Dale W, Yu, Hongbin, Tan, Qian, Thissen, James, Lusby, Terry, Nicoll, Patrick, Shedler, Sarah, Martinez, Paul, Osorio, Alejandro, Lechniak, Jason, Choi, Samuel, Sabino, Kayleen, Iverson, Kathryn, Chan, Luisa, Jaing, Crystal, McGrath, John

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Randomly barcoded transposon mutant libraries for gut commensals I: Strategies for efficient library construction von Tripathi, Surya, Voogdt, Carlos Geert Pieter, Bassler, Stefan Oliver, Anderson, Mary, Huang, Po-Hsun, Sakenova, Nazgul, Capraz, Tümay, Jain, Sunit, Koumoutsi, Alexandra, Bravo, Afonso Martins, Trotter, Valentine, Zimmerman, Michael, Sonnenburg, Justin L., Buie, Cullen, Typas, Athanasios, Deutschbauer, Adam M., Shiver, Anthony L., Huang, Kerwyn Casey

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Are Oligotypes Meaningful Ecological and Phylogenetic Units? A Case Study of Microcystis in Freshwater Lakes von Berry, Michelle A, White, Jeffrey D, Davis, Timothy W, Jain, Sunit, Johengen, Thomas H, Dick, Gregory J, Sarnelle, Orlando, Denef, Vincent J

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Omics-Inferred Partitioning and Expression of Diverse Biogeochemical Functions in a Low-O2 Cyanobacterial Mat Community von Grim, Sharon L, Voorhies, Alexander A, Biddanda, Bopaiah A, Jain, Sunit, Nold, Stephen C, Green, Russ, Dick, Gregory J

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Unraveling the Physiological Roles of the Cyanobacterium Geitlerinema sp. BBD and Other Black Band Disease Community Members through Genomic Analysis of a Mixed Culture von Den Uyl, Paul A, Richardson, Laurie L, Jain, Sunit, Dick, Gregory J

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Single-Cell (Meta-)Genomics of a Dimorphic Candidatus Thiomargarita nelsonii Reveals Genomic Plasticity von Flood, Beverly E, Fliss, Palmer, Jones, Daniel S, Dick, Gregory J, Jain, Sunit, Kaster, Anne-Kristin, Winkel, Matthias, Mußmann, Marc, Bailey, Jake

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Design, construction, and in vivo augmentation of a complex gut microbiome von Cheng, Alice G., Ho, Po-Yi, Aranda-Díaz, Andrés, Jain, Sunit, Yu, Feiqiao B., Meng, Xiandong, Wang, Min, Iakiviak, Mikhail, Nagashima, Kazuki, Zhao, Aishan, Murugkar, Pallavi, Patil, Advait, Atabakhsh, Katayoon, Weakley, Allison, Yan, Jia, Brumbaugh, Ariel R., Higginbottom, Steven, Dimas, Alejandra, Shiver, Anthony L., Deutschbauer, Adam, Neff, Norma, Sonnenburg, Justin L., Huang, Kerwyn Casey, Fischbach, Michael A.

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Ultra-deep sequencing of Hadza hunter-gatherers recovers vanishing gut microbes von Carter, Matthew M., Olm, Matthew R., Merrill, Bryan D., Dahan, Dylan, Tripathi, Surya, Spencer, Sean P., Yu, Feiqiao B., Jain, Sunit, Neff, Norma, Jha, Aashish R., Sonnenburg, Erica D., Sonnenburg, Justin L.

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Mapping the T cell repertoire to a complex gut bacterial community von Nagashima, Kazuki, Zhao, Aishan, Atabakhsh, Katayoon, Bae, Minwoo, Blum, Jamie E., Weakley, Allison, Jain, Sunit, Meng, Xiandong, Cheng, Alice G., Wang, Min, Higginbottom, Steven, Dimas, Alex, Murugkar, Pallavi, Sattely, Elizabeth S., Moon, James J., Balskus, Emily P., Fischbach, Michael A.

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Strain dropouts reveal interactions that govern the metabolic output of the gut microbiome von Wang, Min, Osborn, Lucas J., Jain, Sunit, Meng, Xiandong, Weakley, Allison, Yan, Jia, Massey, William J., Varadharajan, Venkateshwari, Horak, Anthony, Banerjee, Rakhee, Allende, Daniela S., Chan, E. Ricky, Hajjar, Adeline M., Wang, Zeneng, Dimas, Alejandra, Zhao, Aishan, Nagashima, Kazuki, Cheng, Alice G., Higginbottom, Steven, Hazen, Stanley L., Brown, J. Mark, Fischbach, Michael A.

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Community transcriptomic assembly reveals microbes that contribute to deep-sea carbon and nitrogen cycling von Baker, Brett J, Sheik, Cody S, Taylor, Chris A, Jain, Sunit, Bhasi, Ashwini, Cavalcoli, James D, Dick, Gregory J

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Abstract 1490: Novel microbiome-derived peptides activate the host innate immune system by regulation of TLR signaling von Haria, Dhwani, Kiefel, Helena, Katlinskaya, Yuliya, Jain, Sunit, Weinmaier, Thomas, Iwai, Shoko, DeSantis, Todd, Takeuchi, Toshi, Dabbagh, Karim, Graham, Kareem

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Abstract B28: A novel intestinal microbiome-derived peptide modulates immune cell activity and the tumor microenvironment von Kiefel, Helena, Haria, Dhwani, Katlinskaya, Yuliya, Ravichandar, Divya, Jain, Sunit, Weinmaier, Thomas, Iwai, Shoko, DeSantis, Todd, Takeuchi, Toshi, Dabbagh, Karim, Graham, Kareem

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Genomic and transcriptomic analyses of the facultative methanotroph Methylocystis sp. strain SB2 grown on methane or ethanol von Vorobev, Alexey, Jagadevan, Sheeja, Jain, Sunit, Anantharaman, Karthik, Dick, Gregory J, Vuilleumier, Stéphane, Semrau, Jeremy D

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