Genome-scale metabolic models reveal determinants of phenotypic differences in non-Saccharomyces yeasts von Pettersen, Jakob P, Castillo, Sandra, Jouhten, Paula, Almaas, Eivind

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Strain design optimization using reinforcement learning von Sabzevari, Maryam, Szedmak, Sandor, Penttilä, Merja, Jouhten, Paula, Rousu, Juho

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PHB production from cellobiose with Saccharomyces cerevisiae von Ylinen, Anna, de Ruijter, Jorg C, Jouhten, Paula, Penttilä, Merja

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Adaptive laboratory evolution of microbial co‐cultures for improved metabolite secretion von Konstantinidis, Dimitrios, Pereira, Filipa, Geissen, Eva‐Maria, Grkovska, Kristina, Kafkia, Eleni, Jouhten, Paula, Kim, Yongkyu, Devendran, Saravanan, Zimmermann, Michael, Patil, Kiran Raosaheb

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Author Correction: Predictive evolution of metabolic phenotypes using model-designed environments von Jouhten, Paula, Konstantinidis, Dimitrios, Pereira, Filipa, Andrejev, Sergej, Grkovska, Kristina, Castillo, Sandra, Ghiaci, Payam, Beltran, Gemma, Almaas, Eivind, Mas, Albert, Warringer, Jonas, Gonzalez, Ramon, Morales, Pilar, Patil, Kiran R

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Predictive evolution of metabolic phenotypes using model‐designed environments von Jouhten, Paula, Konstantinidis, Dimitrios, Pereira, Filipa, Andrejev, Sergej, Grkovska, Kristina, Castillo, Sandra, Ghiachi, Payam, Beltran, Gemma, Almaas, Eivind, Mas, Albert, Warringer, Jonas, Gonzalez, Ramon, Morales, Pilar, Patil, Kiran R

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Hypoxia and GABA shunt activation in the pathogenesis of Alzheimer's disease von Salminen, Antero, Jouhten, Paula, Sarajärvi, Timo, Haapasalo, Annakaisa, Hiltunen, Mikko

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Highly parallelized laboratory evolution of wine yeasts for enhanced metabolic phenotypes von Ghiaci, Payam, Jouhten, Paula, Martyushenko, Nikolay, Roca-Mesa, Helena, Vázquez, Jennifer, Konstantinidis, Dimitrios, Stenberg, Simon, Andrejev, Sergej, Grkovska, Kristina, Mas, Albert, Beltran, Gemma, Almaas, Eivind, Patil, Kiran R, Warringer, Jonas

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Laboratory evolution reveals regulatory and metabolic trade-offs of glycerol utilization in Saccharomyces cerevisiae von Strucko, Tomas, Zirngibl, Katharina, Pereira, Filipa, Kafkia, Eleni, Mohamed, Elsayed T., Rettel, Mandy, Stein, Frank, Feist, Adam M., Jouhten, Paula, Patil, Kiran Raosaheb, Forster, Jochen

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Metabolic flux profiling of recombinant protein secreting Pichia pastoris growing on glucose:methanol mixtures von Jordà, Joel, Jouhten, Paula, Cámara, Elena, Maaheimo, Hannu, Albiol, Joan, Ferrer, Pau

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Comparative genome-scale reconstruction of gapless metabolic networks for present and ancestral species von Pitkänen, Esa, Jouhten, Paula, Hou, Jian, Syed, Muhammad Fahad, Blomberg, Peter, Kludas, Jana, Oja, Merja, Holm, Liisa, Penttilä, Merja, Rousu, Juho, Arvas, Mikko

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Correlation of gene expression and protein production rate - a system wide study von Arvas, Mikko, Pakula, Tiina, Smit, Bart, Rautio, Jari, Koivistoinen, Heini, Jouhten, Paula, Lindfors, Erno, Wiebe, Marilyn, Penttilä, Merja, Saloheimo, Markku

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Model‐guided development of an evolutionarily stable yeast chassis von Pereira, Filipa, Lopes, Helder, Maia, Paulo, Meyer, Britta, Nocon, Justyna, Jouhten, Paula, Konstantinidis, Dimitrios, Kafkia, Eleni, Rocha, Miguel, Kötter, Peter, Rocha, Isabel, Patil, Kiran R

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Enhanced Triacylglycerol Production With Genetically Modified Trichosporon oleaginosus von Koivuranta, Kari, Castillo, Sandra, Jouhten, Paula, Ruohonen, Laura, Penttilä, Merja, Wiebe, Marilyn G

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Metabolic modelling in the development of cell factories by synthetic biology von Jouhten, Paula

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Xylose-induced dynamic effects on metabolism and gene expression in engineered Saccharomyces cerevisiae in anaerobic glucose-xylose cultures von Alff-Tuomala, Susanne, Salusjärvi, Laura, Barth, Dorothee, Oja, Merja, Penttilä, Merja, Pitkänen, Juha-Pekka, Ruohonen, Laura, Jouhten, Paula

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A multi-level study of recombinant Pichia pastoris in different oxygen conditions von Baumann, Kristin, Carnicer, Marc, Dragosits, Martin, Graf, Alexandra B, Stadlmann, Johannes, Jouhten, Paula, Maaheimo, Hannu, Gasser, Brigitte, Albiol, Joan, Mattanovich, Diethard, Ferrer, Pau

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Production of biopolymer precursors beta-alanine and L-lactic acid from CO2 with metabolically versatile Rhodococcus opacus DSM 43205 von Salusjärvi, Laura, Ojala, Leo, Peddinti, Gopal, Lienemann, Michael, Jouhten, Paula, Pitkänen, Juha-Pekka, Toivari, Mervi

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Inferring branching pathways in genome-scale metabolic networks von Pitkänen, Esa, Jouhten, Paula, Rousu, Juho

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13C metabolic flux profiling of Pichia pastoris grown in aerobic batch cultures on glucose revealed high relative anabolic use of TCA cycle and limited incorporation of provided pr... von Zhang, Meng, Yu, Xiao‐Wei, Xu, Yan, Jouhten, Paula, Swapna, Gurla V. T., Glaser, Ralf W., Hunt, John F., Montelione, Gaetano T., Maaheimo, Hannu, Szyperski, Thomas

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