Linking high GC content to the repair of double strand breaks in prokaryotic genomes von Weissman, Jake L, Fagan, William F, Johnson, Philip L F

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mapDamage2.0: fast approximate Bayesian estimates of ancient DNA damage parameters von Jónsson, Hákon, Ginolhac, Aurélien, Schubert, Mikkel, Johnson, Philip L F, Orlando, Ludovic

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Genetic history of an archaic hominin group from Denisova Cave in Siberia von Reich, David, Viola, Bence, Pääbo, Svante, Green, Richard E, Kircher, Martin, Krause, Johannes, Patterson, Nick, Durand, Eric Y, Briggs, Adrian W, Stenzel, Udo, Johnson, Philip L. F, Maricic, Tomislav, Good, Jeffrey M, Marques-Bonet, Tomas, Alkan, Can, Fu, Qiaomei, Mallick, Swapan, Li, Heng, Meyer, Matthias, Eichler, Evan E, Stoneking, Mark, Richards, Michael, Talamo, Sahra, Shunkov, Michael V, Derevianko, Anatoli P, Hublin, Jean-Jacques, Kelso, Janet, Slatkin, Montgomery

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Targeted Investigation of the Neandertal Genome by Array-Based Sequence Capture von Burbano, Hernán A, Hodges, Emily, Green, Richard E, Briggs, Adrian W, Krause, Johannes, Meyer, Matthias, Good, Jeffrey M, Maricic, Tomislav, Johnson, Philip L.F, Xuan, Zhenyu, Rooks, Michelle, Bhattacharjee, Arindam, Brizuela, Leonardo, Albert, Frank W, de la Rasilla, Marco, Fortea, Javier, Rosas, Antonio, Lachmann, Michael, Hannon, Gregory J, Pääbo, Svante

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Dynamics and turnover of memory CD8 T cell responses following yellow fever vaccination von Zarnitsyna, Veronika I, Akondy, Rama S, Ahmed, Hasan, McGuire, Donald J, Zarnitsyn, Vladimir G, Moore, Mia, Johnson, Philip L F, Ahmed, Rafi, Li, Kelvin W, Hellerstein, Marc K, Antia, Rustom

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A Revised Timescale for Human Evolution Based on Ancient Mitochondrial Genomes von Fu, Qiaomei, Mittnik, Alissa, Johnson, Philip L.F., Bos, Kirsten, Lari, Martina, Bollongino, Ruth, Sun, Chengkai, Giemsch, Liane, Schmitz, Ralf, Burger, Joachim, Ronchitelli, Anna Maria, Martini, Fabio, Cremonesi, Renata G., Svoboda, Jiří, Bauer, Peter, Caramelli, David, Castellano, Sergi, Reich, David, Pääbo, Svante, Krause, Johannes

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Draft Sequence of the Neandertal Genome von Green, Richard E, Krause, Johannes, Briggs, Adrian W, Maricic, Tomislav, Stenzel, Udo, Kircher, Martin, Patterson, Nick, Li, Heng, Zhai, Weiwei, Fritz, Markus Hsi-Yang, Hansen, Nancy F, Durand, Eric Y, Malaspinas, Anna-Sapfo, Jensen, Jeffrey D, Marques-Bonet, Tomas, Alkan, Can, Prüfer, Kay, Meyer, Matthias, Burbano, Hernán A, Good, Jeffrey M, Schultz, Rigo, Aximu-Petri, Ayinuer, Butthof, Anne, Höber, Barbara, Höffner, Barbara, Siegemund, Madlen, Weihmann, Antje, Nusbaum, Chad, Lander, Eric S, Russ, Carsten, Novod, Nathaniel, Affourtit, Jason, Egholm, Michael, Verna, Christine, Rudan, Pavao, Brajkovic, Dejana, Kucan, Željko, Gušic, Ivan, Doronichev, Vladimir B, Golovanova, Liubov V, Lalueza-Fox, Carles, de la Rasilla, Marco, Fortea, Javier, Rosas, Antonio, Schmitz, Ralf W, Johnson, Philip L.F, Eichler, Evan E, Falush, Daniel, Birney, Ewan, Mullikin, James C, Slatkin, Montgomery, Nielsen, Rasmus, Kelso, Janet, Lachmann, Michael, Reich, David, Pääbo, Svante

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Patterns of Damage in Genomic DNA Sequences from a Neandertal von Briggs, Adrian W., Stenzel, Udo, Johnson, Philip L. F., Green, Richard E., Kelso, Janet, Prüfer, Kay, Meyer, Matthias, Krause, Johannes, Ronan, Michael T., Lachmann, Michael, Pääbo, Svante

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Initial viral load determines the magnitude of the human CD8 T cell response to yellow fever vaccination von Akondy, Rama S., Johnson, Philip L. F., Nakaya, Helder I., Edupuganti, Srilatha, Mulligan, Mark J., Lawson, Benton, Miller, Joseph D., Pulendran, Bali, Antia, Rustom, Ahmed, Rafi

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Genome-wide ancestry of 17th-century enslaved Africans from the Caribbean von Schroeder, Hannes, Ávila-Arcos, María C., Malaspinas, Anna-Sapfo, Poznik, G. David, Sandoval-Velasco, Marcela, Carpenter, Meredith L., Moreno-Mayar, José Víctor, Sikora, Martin, Johnson, Philip L. F., Allentoft, Morten Erik, Samaniego, José Alfredo, Haviser, Jay B., Dee, Michael W., Stafford, Thomas W., Salas, Antonio, Orlando, Ludovic, Willerslev, Eske, Bustamante, Carlos D., Gilbert, M. Thomas P.

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Visualization and prediction of CRISPR incidence in microbial trait-space to identify drivers of antiviral immune strategy von Weissman, JL, Laljani, Rohan M. R., Fagan, William F., Johnson, Philip L. F.

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Exploring the functional composition of the human microbiome using a hand-curated microbial trait database von Weissman, Jake L, Dogra, Sonia, Javadi, Keyan, Bolten, Samantha, Flint, Rachel, Davati, Cyrus, Beattie, Jess, Dixit, Keshav, Peesay, Tejasvi, Awan, Shehar, Thielen, Peter, Breitwieser, Florian, Johnson, Philip L. F, Karig, David, Fagan, William F, Bewick, Sharon

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The Deakin/Graeff hypothesis: Focus on serotonergic inhibition of panic von PAUL, Evan D, JOHNSON, Philip L, SHEKHAR, Anantha, LOWRY, Christopher A

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Avoidance of Self during CRISPR Immunization von Weissman, Jake L., Stoltzfus, Arlin, Westra, Edze R., Johnson, Philip L.F.

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Social learning and amygdala disruptions in Nf1 mice are rescued by blocking p21-activated kinase von Molosh, Andrei I, Johnson, Philip L, Spence, John P, Arendt, David, Federici, Lauren M, Bernabe, Cristian, Janasik, Steven P, Segu, Zaneer M, Khanna, Rajesh, Goswami, Chirayu, Zhu, Weiguo, Park, Su-Jung, Li, Lang, Mechref, Yehia S, Clapp, D Wade, Shekhar, Anantha

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A Selective Orexin-1 Receptor Antagonist Attenuates Stress-Induced Hyperarousal without Hypnotic Effects von Bonaventure, Pascal, Yun, Sujin, Johnson, Philip L., Shekhar, Anantha, Fitz, Stephanie D., Shireman, Brock T., Lebold, Terry P., Nepomuceno, Diane, Lord, Brian, Wennerholm, Michelle, Shelton, Jonathan, Carruthers, Nicholas, Lovenberg, Timothy, Dugovic, Christine

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Orexin 1 receptors are a novel target to modulate panic responses and the panic brain network von Johnson, Philip L, Samuels, Brian C, Fitz, Stephanie D, Federici, Lauren M, Hammes, Nathan, Early, Maureen C, Truitt, William, Lowry, Christopher A, Shekhar, Anantha

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Peripheral selection rather than thymic involution explains sudden contraction in naive CD4 T-cell diversity with age von Johnson, Philip L. F., Yates, Andrew J., Goronzy, Jörg J., Antia, Rustom

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Identification of a novel perifornical-hypothalamic-area-projecting serotonergic system that inhibits innate panic and conditioned fear responses von Bernabe, Cristian S., Caliman, Izabela F., de Abreu, Aline R. R., Molosh, Andrei I., Truitt, William A., Shekhar, Anantha, Johnson, Philip L.

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Orexin Depolarizes Central Amygdala Neurons via Orexin Receptor 1, Phospholipase C and Sodium-Calcium Exchanger and Modulates Conditioned Fear von Dustrude, Erik T, Caliman, Izabela F, Bernabe, Cristian S, Fitz, Stephanie D, Grafe, Laura A, Bhatnagar, Seema, Bonaventure, Pascal, Johnson, Philip L, Molosh, Andrei I, Shekhar, Anantha

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