Computational prediction of changes in brain metabolic fluxes during Parkinson's disease from mRNA expression von Supandi, Farahaniza, van Beek, Johannes H G M

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A community-driven global reconstruction of human metabolism von Thiele, Ines, Swainston, Neil, Fleming, Ronan M T, Hoppe, Andreas, Sahoo, Swagatika, Aurich, Maike K, Haraldsdottir, Hulda, Mo, Monica L, Rolfsson, Ottar, Stobbe, Miranda D, Thorleifsson, Stefan G, Agren, Rasmus, Bölling, Christian, Bordel, Sergio, Chavali, Arvind K, Dobson, Paul, Dunn, Warwick B, Endler, Lukas, Hala, David, Hucka, Michael, Hull, Duncan, Jameson, Daniel, Jamshidi, Neema, Jonsson, Jon J, Juty, Nick, Keating, Sarah, Nookaew, Intawat, Le Novère, Nicolas, Malys, Naglis, Mazein, Alexander, Papin, Jason A, Price, Nathan D, Selkov, Evgeni, Sigurdsson, Martin I, Simeonidis, Evangelos, Sonnenschein, Nikolaus, Smallbone, Kieran, Sorokin, Anatoly, van Beek, Johannes H G M, Weichart, Dieter, Goryanin, Igor, Nielsen, Jens, Westerhoff, Hans V, Kell, Douglas B, Mendes, Pedro, Palsson, Bernhard Ø

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Using bioconductor package BiGGR for metabolic flux estimation based on gene expression changes in brain von Gavai, Anand K, Supandi, Farahaniza, Hettling, Hannes, Murrell, Paul, Leunissen, Jack A M, van Beek, Johannes H G M

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Analyzing the functional properties of the creatine kinase system with multiscale 'sloppy' modeling von Hettling, Hannes, van Beek, Johannes H G M

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Adenine nucleotide-creatine-phosphate module in myocardial metabolic system explains fast phase of dynamic regulation of oxidative phosphorylation von van Beek, Johannes H. G. M

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A vision and strategy for the virtual physiological human in 2010 and beyond von Hunter, Peter, Coveney, Peter V., de Bono, Bernard, Diaz, Vanessa, Fenner, John, Frangi, Alejandro F., Harris, Peter, Hose, Rod, Kohl, Peter, Lawford, Pat, McCormack, Keith, Mendes, Miriam, Omholt, Stig, Quarteroni, Alfio, Skr, John, Tegner, Jesper, Randall Thomas, S., Tollis, Ioannis, Tsamardinos, Ioannis, van Beek, Johannes H. G. M., Viceconti, Marco

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Increased expression of matrix extracellular phosphoglycoprotein (MEPE) in cortical bone of the rat tibia after mechanical loading: identification by oligonucleotide microarray von Reijnders, Christianne M A, van Essen, Huib W, van Rens, Birgitte T T M, van Beek, Johannes H G M, Ylstra, Bauke, Blankenstein, Marinus A, Lips, Paul, Bravenboer, Nathalie

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Electron Density Fingerprints (EDprints): Virtual Screening Using Assembled Information of Electron Density von Kooistra, Albert J, Binsl, Thomas W, van Beek, Johannes H. G. M, de Graaf, Chris, Heringa, Jaap

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Understanding the physiology of the ageing individual: computational modelling of changes in metabolism and endurance von van Beek, Johannes H. G. M., Kirkwood, Thomas B. L., Bassingthwaighte, James B.

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Computational quantification of metabolic fluxes from a single isotope snapshot: application to an animal biopsy von Binsl, Thomas W., Alders, David J.C., Heringa, Jaap, Groeneveld, A.B. Johan, van Beek, Johannes H.G.M.

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Coordinated Behavior of Mitochondria in Both Space and Time: A Reactive Oxygen Species-Activated Wave of Mitochondrial Depolarization von Brady, Nathan R., Elmore, Steven P., van Beek, Johannes J.H.G.M., Krab, Klaas, Courtoy, Pierre J., Hue, Louis, Westerhoff, Hans V.

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Progressively heterogeneous mismatch of regional oxygen delivery to consumption during graded coronary stenosis in pig left ventricle von Alders, David J C, Groeneveld, A B Johan, Binsl, Thomas W, van Beek, Johannes H G M

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FluxSimulator : An R Package to Simulate Isotopomer Distributions in Metabolic Networks von Binsl, Thomas W., Mullen, Katharine M., Stokkum, Ivo H. M. van, Heringa, Jaap, Beek, Johannes H. G. M. van

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A vision and strategy for the virtual physiological human: 2012 update von Hunter, Peter, Chapman, Tara, Coveney, Peter V., de Bono, Bernard, Diaz, Vanessa, Fenner, John, Frangi, Alejandro F., Harris, Peter, Hose, Rod, Kohl, Peter, Lawford, Pat, McCormack, Keith, Mendes, Miriam, Omholt, Stig, Quarteroni, Alfio, Shublaq, Nour, Skår, John, Stroetmann, Karl, Tegner, Jesper, Thomas, S. Randall, Tollis, Ioannis, Tsamardinos, Ioannis, van Beek, Johannes H. G. M., Viceconti, Marco

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Simulating the physiology of athletes during endurance sports events: modelling human energy conversion and metabolism von van Beek, Johannes H. G. M., Supandi, Farahaniza, Gavai, Anand K., de Graaf, Albert A., Binsl, Thomas W., Hettling, Hannes

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Glycolytic buffering affects cardiac bioenergetic signaling and contractile reserve similar to creatine kinase von Harrison, Glenn J, van Wijhe, Michiel H, de Groot, Bas, Dijk, Francina J, Gustafson, Lori A, van Beek, Johannes H. G. M

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Activation time of myocardial oxidative phosphorylation in creatine kinase and adenylate kinase knockout mice von Gustafson, Lori A, Van Beek, Johannes H. G. M

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Multiscale and modular analysis of cardiac energy metabolism: repairing the broken interfaces of isolated system components von Van Beek, Johannes H G M

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Computational estimation of tricarboxylic acid cycle fluxes using noisy NMR data from cardiac biopsies von Hettling, Hannes, Alders, David J C, Heringa, Jaap, Binsl, Thomas W, Groeneveld, A B Johan, van Beek, Johannes H G M

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Regional sympathetic denervation affects the relation between canine local myocardial blood flow and oxygen consumption von Alders, David J. C., Cornelussen, Richard N., Prinzen, Frits W., Specht, Patricia A. C., Noble, Mark I. M., Drake‐Holland, Angela J., De Kanter, Frans J. J., Van Beek, Johannes H. G. M.

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