pwrEWAS: a user-friendly tool for comprehensive power estimation for epigenome wide association studies (EWAS) von Graw, Stefan, Henn, Rosalyn, Thompson, Jeffrey A, Koestler, Devin C

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AMEND: active module identification using experimental data and network diffusion von Boyd, Samuel S, Slawson, Chad, Thompson, Jeffrey A

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Common features of microRNA target prediction tools von Peterson, Sarah M, Thompson, Jeffrey A, Ufkin, Melanie L, Sathyanarayana, Pradeep, Liaw, Lucy, Congdon, Clare Bates

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Equivalent change enrichment analysis: assessing equivalent and inverse change in biological pathways between diverse experiments von Thompson, Jeffrey A., Koestler, Devin C.

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The rural mortality penalty in U.S. hospital patients with COVID-19 von Thompson, Jeffrey A, Mudaranthakam, Dinesh Pal, Chollet-Hinton, Lynn

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Cross-platform normalization of microarray and RNA-seq data for machine learning applications von Thompson, Jeffrey A, Tan, Jie, Greene, Casey S

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The need to study rural cancer outcome disparities at the local level: a retrospective cohort study in Kansas and Missouri von Thompson, Jeffrey A., Chollet-Hinton, Lynn, Keighley, John, Chang, Audrey, Mudaranthakam, Dinesh Pal, Streeter, David, Hu, Jinxiang, Park, Michele, Gajewski, Byron

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Methylation-to-Expression Feature Models of Breast Cancer Accurately Predict Overall Survival, Distant-Recurrence Free Survival, and Pathologic Complete Response in Multiple Cohort... von Thompson, Jeffrey A., Christensen, Brock C., Marsit, Carmen J.

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Pan-Cancer Analysis Reveals Differential Susceptibility of Bidirectional Gene Promoters to DNA Methylation, Somatic Mutations, and Copy Number Alterations von Thompson, Jeffrey A, Christensen, Brock C, Marsit, Carmen J

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Perception, knowledge, and interest of urologic surgery: a medical student survey von Whiles, Bristol B, Thompson, Jeffrey A, Griebling, Tomas L, Thurmon, Kerri L

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Comprehensive exploration of JQ1 and GSK2801 targets in breast cancer using network pharmacology and molecular modeling approaches von Yellapu, Nanda Kumar, Pei, Dong, Nissen, Emily, Thompson, Jeffrey A., Koestler, Devin C.

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Multi-omics after O-GlcNAc alteration identified cellular processes promoting aneuploidy after loss of O-GlcNAc transferase von Boyd, Samuel S., Robarts, Dakota R., Nguyen, Khue, Villar, Maite, Alghusen, Ibtihal M., Kotulkar, Manasi, Denson, Aspin, Fedosyuk, Halyna, Whelan, Stephen A., Lee, Norman C.Y., Hanover, John, Dias, Wagner B., Tan, Ee Phie, McGreal, Steven R., Artigues, Antonio, Swerdlow, Russell H., Thompson, Jeffrey A., Apte, Udayan, Slawson, Chad

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A Novel Framework for the Identification of Reference DNA Methylation Libraries for Reference-Based Deconvolution of Cellular Mixtures von Bell-Glenn, Shelby, Thompson, Jeffrey A, Salas, Lucas A, Koestler, Devin C

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Using Bayesian hierarchical modeling for performance evaluation of clinical trial accrual for a cancer center von Shi, Xiaosong, Mudaranthakam, Dinesh Pal, Wick, Jo A., Streeter, David, Thompson, Jeffrey A., Streeter, Natalie R., Lin, Tara L., Hines, Joseph, Mayo, Matthew S., Gajewski, Byron J.

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Assessing equivalent and inverse change in genes between diverse experiments von Neums, Lisa, Koestler, Devin C, Xia, Qing, Hu, Jinxiang, Patel, Shachi, Bell-Glenn, Shelby, Pei, Dong, Zhang, Bo, Boyd, Samuel, Chalise, Prabhakar, Thompson, Jeffrey A

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Batch effect reduction of microarray data with dependent samples using an empirical Bayes approach (BRIDGE) von Xia, Qing, Thompson, Jeffrey A., Koestler, Devin C.

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pwrBRIDGE: a user-friendly web application for power and sample size estimation in batch-confounded microarray studies with dependent samples von Xia, Qing, Thompson, Jeffrey A., Koestler, Devin C.

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Ureteroscopic Performance of High Power Super Pulse Thulium Fiber Laser for the Treatment of Urolithiasis: Results of the First Case Series in North America von Carrera, Raphael V., Randall, J. Hogan, Garcia-Gil, Maurilio, Knudsen, Bodo E., Chew, Ben H., Thompson, Jeffrey A., Humphreys, Mitchell R., Molina, Wilson R.

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Utilization of MOSES Modulated Pulse Mode Results in Improved Efficiency in Holmium:YAG Laser Ablation of the Prostate von Whiles, Bristol B., Martin, Austin J., Brevik, Andrew, Carrera, Raphael V., Thompson, Jeffrey A., Molina, Wilson R., Thurmon, Kerri L.

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Image Distortion During Flexible Ureteroscopy: A Laboratory Model Comparing Super Pulsed Thulium Fiber Laser vs High-Power Ho:YAG Laser von Miller, Caleb S, Whiles, Bristol B, Ito, Willian E, Machen, Edward, Thompson, Jeffrey A, Duchene, David A, Neff, Donald A, Molina, Wilson R

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