Mathematical validation of a biological model for unlinking replication catenanes by recombination von Jayaram, Makkuni

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Disintegration promotes protospacer integration by the Cas1-Cas2 complex von Ma, Chien-Hui, Javanmardi, Kamyab, Finkelstein, Ilya J, Jayaram, Makkuni

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A bipartite thermodynamic-kinetic contribution by an activating mutation to RDF-independent excision by a phage serine integrase von Fan, Hsiu-Fang, Su, Bo-Yu, Ma, Chien-Hui, Rowley, Paul A, Jayaram, Makkuni

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The selfish yeast plasmid exploits a SWI/SNF-type chromatin remodeling complex for hitchhiking on chromosomes and ensuring high-fidelity propagation von Ma, Chien-Hui, Kumar, Deepanshu, Jayaram, Makkuni, Ghosh, Santanu K, Iyer, Vishwanath R

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The selfish yeast plasmid utilizes the condensin complex and condensed chromatin for faithful partitioning von Kumar, Deepanshu, Prajapati, Hemant Kumar, Mahilkar, Anjali, Ma, Chien-Hui, Mittal, Priyanka, Jayaram, Makkuni, Ghosh, Santanu K

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A Flp-SUMO hybrid recombinase reveals multi-layered copy number control of a selfish DNA element through post-translational modification von Ma, Chien-Hui, Su, Bo-Yu, Maciaszek, Anna, Fan, Hsiu-Fang, Guga, Piotr, Jayaram, Makkuni

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Histone H3-variant Cse4-induced positive DNA supercoiling in the yeast plasmid has implications for a plasmid origin of a chromosome centromere von Huang, Chu-Chun, Chang, Keng-Ming, Cui, Hong, Jayaram, Makkuni

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Single-Molecule Tethered Particle Motion: Stepwise Analyses of Site-Specific DNA Recombination von Fan, Hsiu-Fang, Ma, Chien-Hui, Jayaram, Makkuni

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Cse4 (CenH3) Association with the Saccharomyces cerevisiae Plasmid Partitioning Locus in Its Native and Chromosomally Integrated States: Implications in Centromere Evolution von Huang, Chu-Chun, Hajra, Sujata, Ghosh, Santanu Kumar, Jayaram, Makkuni

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Association of a centromere specific nucleosome with the yeast plasmid partitioning locus: Implications beyond plasmid partitioning von Jayaram, Makkuni

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Faithful segregation of the multicopy yeast plasmid through cohesin-mediated recognition of sisters von Ghosh, Santanu K, Hajra, Sujata, Jayaram, Makkuni

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Mechanisms for chromosome and plasmid segregation von Ghosh, Santanu Kumar, Hajra, Sujata, Paek, Andrew, Jayaram, Makkuni

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An Overview of Tyrosine Site-specific Recombination: From an Flp Perspective von Jayaram, Makkuni, Ma, Chien-Hui, Kachroo, Aashiq H, Rowley, Paul A, Guga, Piotr, Fan, Hsui-Fang, Voziyanov, Yuri

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Reactions of Cre with methylphosphonate DNA: similarities and contrasts with Flp and vaccinia topoisomerase von Ma, Chien-Hui, Kachroo, Aashiq H, Macieszak, Anna, Chen, Tzu-Yang, Guga, Piotr, Jayaram, Makkuni

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A Novel Role for the Mitotic Spindle during DNA Segregation in Yeast: Promoting 2μm Plasmid-Cohesin Association von Mehta, Shwetal, Yang, Xian-Mei, Jayaram, Makkuni, Velmurugan, Soundarapandian

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Stepwise Manipulation of DNA Specificity in Flp Recombinase: Progressively Adapting Flp to Individual and Combinatorial Mutations in its Target Site von Voziyanov, Yuri, Konieczka, Jay H., Francis Stewart, A., Jayaram, Makkuni

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Mutations in a Partitioning Protein and Altered Chromatin Structure at the Partitioning Locus Prevent Cohesin Recruitment by the Saccharomyces cerevisiae Plasmid and Cause Plasmid... von Yang, Xian-Mei, Mehta, Shwetal, Uzri, Dina, Jayaram, Makkuni, Velmurugan, Soundarapandian

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The 2μm Plasmid Causes Cell Death in Saccharomyces cerevisiae with a Mutation in Ulp1 Protease von Dobson, Melanie J., Pickett, Andrew J., Velmurugan, Soundarapandian, Pinder, Jordan B., Barrett, Lori A., Jayaram, Makkuni, Chew, Joyce S. K.

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Single-molecule analysis of ϕC31 integrase-mediated site-specific recombination by tethered particle motion von Fan, Hsiu-Fang, Hsieh, Tao-Shih, Ma, Chien-Hui, Jayaram, Makkuni

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The Mu Transposase Interwraps Distant DNA Sites within a Functional Transpososome in the Absence of DNA Supercoiling von Yin, Zhiqi, Jayaram, Makkuni, Pathania, Shailja, Harshey, Rasika M.

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