DiffCoEx: a simple and sensitive method to find differentially coexpressed gene modules von Tesson, Bruno M, Breitling, Rainer, Jansen, Ritsert C

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Mapping the Epigenetic Basis of Complex Traits von Cortijo, Sandra, Wardenaar, René, Colomé-Tatché, Maria, Gilly, Arthur, Etcheverry, Mathilde, Labadie, Karine, Caillieux, Erwann, Hospital, Fréderic, Aury, Jean-Marc, Wincker, Patrick, Roudier, François, Jansen, Ritsert C., Colot, Vincent, Johannes, Frank

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R/qtl: high-throughput multiple QTL mapping von Arends, Danny, Prins, Pjotr, Jansen, Ritsert C., Broman, Karl W.

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Rate, spectrum, and evolutionary dynamics of spontaneous epimutations von van der Graaf, Adriaan, Wardenaar, René, Neumann, Drexel A., Taudt, Aaron, Shaw, Ruth G., Jansen, Ritsert C., Schmitz, Robert J., Colomé-Tatché, Maria, Johannes, Frank

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PeakML/mzMatch: A File Format, Java Library, R Library, and Tool-Chain for Mass Spectrometry Data Analysis von Scheltema, Richard A, Jankevics, Andris, Jansen, Ritsert C, Swertz, Morris A, Breitling, Rainer

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FitTetra 2.0 - improved genotype calling for tetraploids with multiple population and parental data support von Zych, Konrad, Gort, Gerrit, Maliepaard, Chris A, Jansen, Ritsert C, Voorrips, Roeland E

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Features of the Arabidopsis recombination landscape resulting from the combined loss of sequence variation and DNA methylation von Colomé-Tatché, Maria, Cortijo, Sandra, Wardenaar, René, Morgado, Lionel, Lahouze, Benoit, Sarazin, Alexis, Etcheverry, Mathilde, Martin, Antoine, Feng, Suhua, Duvernois-Berthet, Evelyne, Labadie, Karine, Wincker, Patrick, Jacobsen, Steven E, Jansen, Ritsert C, Colot, Vincent, Johannes, Frank

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Mapping determinants of gene expression plasticity by genetical genomics in C. elegans von Li, Yang, Alvarez, Olga Alda, Gutteling, Evert W, Tijsterman, Marcel, Fu, Jingyuan, Riksen, Joost A G, Hazendonk, Esther, Prins, Pjotr, Plasterk, Ronald H A, Jansen, Ritsert C, Breitling, Rainer, Kammenga, Jan E

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Genome-wide epigenetic perturbation jump-starts patterns of heritable variation found in nature von Roux, Fabrice, Colomé-Tatché, Maria, Edelist, Cécile, Wardenaar, René, Guerche, Philippe, Hospital, Frédéric, Colot, Vincent, Jansen, Ritsert C, Johannes, Frank

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Genetical genomics: spotlight on QTL hotspots von Breitling, Rainer, Li, Yang, Tesson, Bruno M, Fu, Jingyuan, Wu, Chunlei, Wiltshire, Tim, Gerrits, Alice, Bystrykh, Leonid V, de Haan, Gerald, Su, Andrew I, Jansen, Ritsert C

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Toward effective software solutions for big biology von Prins, Pjotr, de Ligt, Joep, Tarasov, Artem, Jansen, Ritsert C, Cuppen, Edwin, Bourne, Philip E

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Expression quantitative trait loci are highly sensitive to cellular differentiation state von Gerrits, Alice, Li, Yang, Tesson, Bruno M, Bystrykh, Leonid V, Weersing, Ellen, Ausema, Albertina, Dontje, Bert, Wang, Xusheng, Breitling, Rainer, Jansen, Ritsert C, de Haan, Gerald

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Sequence polymorphisms cause many false cis eQTLs von Alberts, Rudi, Terpstra, Peter, Li, Yang, Breitling, Rainer, Nap, Jan-Peter, Jansen, Ritsert C

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A view from the clinic – Perspectives from Dutch patients and professionals on high myopia care von Ravenstijn, Monica, Bois, Gerlof, Jansen, Ritsert C., Liu, Chang, Luyten, Gregorius P. M., Leeuwen, Redmer, Dickman, Mor M., Reus, Nic J., Yzer, Suzanne, Klaver, Caroline C. W.

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Regulatory network construction in Arabidopsis by using genome-wide gene expression quantitative trait loci von Keurentjes, Joost J.B, Fu, Jingyuan, Terpstra, Inez R, Garcia, Juan M, van den Ackerveken, Guido, Snoek, L. Basten, Peeters, Anton J.M, Vreugdenhil, Dick, Koornneef, Maarten, Jansen, Ritsert C

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Natural variation of histone modification and its impact on gene expression in the rat genome von Rintisch, Carola, Heinig, Matthias, Bauerfeind, Anja, Schafer, Sebastian, Mieth, Christin, Patone, Giannino, Hummel, Oliver, Chen, Wei, Cook, Stuart, Cuppen, Edwin, Colomé-Tatché, Maria, Johannes, Frank, Jansen, Ritsert C, Neil, Helen, Werner, Michel, Pravenec, Michal, Vingron, Martin, Hubner, Norbert

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The MOLGENIS toolkit: rapid prototyping of biosoftware at the push of a button von Swertz, Morris A, Dijkstra, Martijn, Adamusiak, Tomasz, van der Velde, Joeri K, Kanterakis, Alexandros, Roos, Erik T, Lops, Joris, Thorisson, Gudmundur A, Arends, Danny, Byelas, George, Muilu, Juha, Brookes, Anthony J, de Brock, Engbert O, Jansen, Ritsert C, Parkinson, Helen

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Epigenome dynamics: a quantitative genetics perspective von Johannes, Frank, Colot, Vincent, Jansen, Ritsert C

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reGenotyper: Detecting mislabeled samples in genetic data von Zych, Konrad, Snoek, Basten L, Elvin, Mark, Rodriguez, Miriam, Van der Velde, K Joeri, Arends, Danny, Westra, Harm-Jan, Swertz, Morris A, Poulin, Gino, Kammenga, Jan E, Breitling, Rainer, Jansen, Ritsert C, Li, Yang

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Opinion: Epigenome dynamics: a quantitative genetics perspective von Johannes, Frank, Colot, Vincent, Jansen, Ritsert C

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