Deconvolution of single-cell multi-omics layers reveals regulatory heterogeneity von Liu, Longqi, Liu, Chuanyu, Quintero, Andrés, Wu, Liang, Yuan, Yue, Wang, Mingyue, Cheng, Mengnan, Leng, Lizhi, Xu, Liqin, Dong, Guoyi, Li, Rui, Liu, Yang, Wei, Xiaoyu, Xu, Jiangshan, Chen, Xiaowei, Lu, Haorong, Chen, Dongsheng, Wang, Quanlei, Zhou, Qing, Lin, Xinxin, Li, Guibo, Liu, Shiping, Wang, Qi, Wang, Hongru, Fink, J. Lynn, Gao, Zhengliang, Liu, Xin, Hou, Yong, Zhu, Shida, Yang, Huanming, Ye, Yunming, Lin, Ge, Chen, Fang, Herrmann, Carl, Eils, Roland, Shang, Zhouchun, Xu, Xun

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Chromosome arm aneuploidies shape tumour evolution and drug response von Shukla, Ankit, Nguyen, Thu H. M., Moka, Sarat B., Ellis, Jonathan J., Grady, John P., Oey, Harald, Cristino, Alexandre S., Khanna, Kum Kum, Kroese, Dirk P., Krause, Lutz, Dray, Eloise, Fink, J. Lynn, Duijf, Pascal H. G.

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Targeted Next-Generation Sequencing for Detecting MLL Gene Fusions in Leukemia von Afrin, Sadia, Zhang, Christine R C, Meyer, Claus, Stinson, Caedyn L, Pham, Thy, Bruxner, Timothy J C, Venn, Nicola C, Trahair, Toby N, Sutton, Rosemary, Marschalek, Rolf, Fink, J Lynn, Moore, Andrew S

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LOCATE: a mammalian protein subcellular localization database von Sprenger, Josefine, Lynn Fink, J, Karunaratne, Seetha, Hanson, Kelly, Hamilton, Nicholas A, Teasdale, Rohan D

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PTEN deletion drives acute myeloid leukemia resistance to MEK inhibitors von Smith, Amanda M, Zhang, Christine R C, Cristino, Alexandre S, Grady, John P, Fink, J Lynn, Moore, Andrew S

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Marked mitochondrial genetic variation in individuals and populations of the carcinogenic liver fluke Clonorchis sinensis von Kinkar, Liina, Korhonen, Pasi K, Wang, Daxi, Zhu, Xing-Quan, Chelomina, Galina N, Wang, Tao, Hall, Ross S, Koehler, Anson V, Harliwong, Ivon, Yang, Bicheng, Fink, J. Lynn, Young, Neil D, Gasser, Robin B

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Regional Variation in Epidermal Susceptibility to UV-Induced Carcinogenesis Reflects Proliferative Activity of Epidermal Progenitors von Roy, Edwige, Wong, Ho Yi, Villani, Rehan, Rouille, Thomas, Salik, Basit, Sim, Seen Ling, Murigneux, Valentine, Stark, Mitchell S., Fink, J. Lynn, Soyer, H. Peter, Walker, Graeme, Lyons, J. Guy, Saunders, Nicholas, Khosrotehrani, Kiarash

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Erythrocyte microRNA sequencing reveals differential expression in relapsing-remitting multiple sclerosis von Groen, Kira, Maltby, Vicki E, Lea, Rodney A, Sanders, Katherine A, Fink, J Lynn, Scott, Rodney J, Tajouri, Lotti, Lechner-Scott, Jeannette

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Translocation Breakpoints Preferentially Occur in Euchromatin and Acrocentric Chromosomes von Lin, Cheng-Yu, Shukla, Ankit, Grady, John P, Fink, J Lynn, Dray, Eloise, Duijf, Pascal H G

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LOCATE: a mouse protein subcellular localization database von Fink, J. Lynn, Aturaliya, Rajith N, Davis, Melissa J, Zhang, Fasheng, Hanson, Kelly, Teasdale, Melvena S, Kai, Chikatoshi, Kawai, Jun, Carninci, Piero, Hayashizaki, Yoshihide, Teasdale, Rohan D

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Subclonal evolution in disease progression from MGUS/SMM to multiple myeloma is characterised by clonal stability von Dutta, Ankit K., Fink, J. Lynn, Grady, John P., Morgan, Gareth J., Mullighan, Charles G., To, Luen B., Hewett, Duncan R., Zannettino, Andrew C. W.

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Evaluation and comparison of mammalian subcellular localization prediction methods von Sprenger, Josefine, Fink, J Lynn, Teasdale, Rohan D

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Progression of Disease Within 24 Months in Follicular Lymphoma Is Associated With Reduced Intratumoral Immune Infiltration von Tobin, Joshua W D, Keane, Colm, Gunawardana, Jay, Mollee, Peter, Birch, Simone, Hoang, Thanh, Lee, Justina, Li, Li, Huang, Li, Murigneux, Valentine, Fink, J Lynn, Matigian, Nicholas, Vari, Frank, Francis, Santiyagu, Kridel, Robert, Weigert, Oliver, Haebe, Sarah, Jurinovic, Vindi, Klapper, Wolfram, Steidl, Christian, Sehn, Laurie H, Law, Soi-Cheng, Wykes, Michelle N, Gandhi, Maher K

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Computational biology resources lack persistence and usability von Veretnik, Stella, Fink, J Lynn, Bourne, Philip E

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Use of keyword hierarchies to interpret gene expression patterns von Masys, Daniel R., Welsh, John B., Lynn Fink, J., Gribskov, Michael, Klacansky, Igor, Corbeil, Jacques

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Genomic catastrophes frequently arise in esophageal adenocarcinoma and drive tumorigenesis von Nones, Katia, Waddell, Nicola, Wayte, Nicci, Patch, Ann-Marie, Bailey, Peter, Newell, Felicity, Holmes, Oliver, Fink, J. Lynn, Quinn, Michael C. J., Tang, Yue Hang, Lampe, Guy, Quek, Kelly, Loffler, Kelly A., Manning, Suzanne, Idrisoglu, Senel, Miller, David, Xu, Qinying, Waddell, Nick, Wilson, Peter J., Bruxner, Timothy J. C., Christ, Angelika N., Harliwong, Ivon, Nourse, Craig, Nourbakhsh, Ehsan, Anderson, Matthew, Kazakoff, Stephen, Leonard, Conrad, Wood, Scott, Simpson, Peter T., Reid, Lynne E., Krause, Lutz, Hussey, Damian J., Watson, David I., Lord, Reginald V., Nancarrow, Derek, Phillips, Wayne A., Gotley, David, Smithers, B. Mark, Whiteman, David C., Hayward, Nicholas K., Campbell, Peter J., Pearson, John V., Grimmond, Sean M., Barbour, Andrew P.

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Subtype-Specific Analyses Reveal Infiltrative Basal Cell Carcinomas Are Highly Interactive with their Environment von Villani, Rehan, Murigneux, Valentine, Alexis, Josue, Sim, Seen-Ling, Wagels, Michael, Saunders, Nicholas, Soyer, H. Peter, Parmentier, Laurent, Nikolaev, Sergey, Fink, J. Lynn, Roy, Edwige, Khosrotehrani, Kiarash

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A workflow to increase verification rate of chromosomal structural rearrangements using high-throughput next-generation sequencing von Quek, Kelly, Nones, Katia, Patch, Ann-Marie, Fink, J. Lynn, Newell, Felicity, Cloonan, Nicole, Miller, David, Fadlullah, Muhammad Z. H, Kassahn, Karin, Christ, Angelika N, Bruxner, Timothy J. C, Manning, Suzanne, Harliwong, Ivon, Idrisoglu, Senel, Nourse, Craig, Nourbakhsh, Ehsan, Wani, Shivangi, Steptoe, Anita, Anderson, Matthew, Holmes, Oliver, Leonard, Conrad, Taylor, Darrin, Wood, Scott, Xu, Qinying, Wilson, Peter, Biankin, Andrew V, Pearson, John V, Waddell, Nic, Grimmond, Sean M

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Differential use of signal peptides and membrane domains is a common occurrence in the protein output of transcriptional units von Davis, Melissa J, Hanson, Kelly A, Clark, Francis, Fink, J Lynn, Zhang, Fasheng, Kasukawa, Takeya, Kai, Chikatoshi, Kawai, Jun, Carninci, Piero, Hayashizaki, Yoshihide, Teasdale, Rohan D

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Minimizing Sample Failure Rates for Challenging Clinical Tumor Samples von Fink, J. Lynn, Jaradi, Binny, Stone, Nathan, Anderson, Lisa, Leo, Paul J., Marshall, Mhairi, Ellis, Jonathan, Waring, Paul M., O’Byrne, Kenneth

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