Epigenetic memory in induced pluripotent stem cells von Feinberg, A. P, Daley, G. Q, Kim, K, Doi, A, Wen, B, Ng, K, Zhao, R, Cahan, P, Kim, J, Aryee, M. J, Ji, H, Ehrlich, L. I. R, Yabuuchi, A, Takeuchi, A, Cunniff, K. C, Hongguang, H, Mckinney-Freeman, S, Naveiras, O, Yoon, T. J, Irizarry, R. A, Jung, N, Seita, J, Hanna, J, Murakami, P, Jaenisch, R, Weissleder, R, Orkin, S. H, Weissman, I. L

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A comparison of normalization methods for high density oligonucleotide array data based on variance and bias von BOLSTAD, B. M, IRIZARRY, R. A, ASTRAND, M, SPEED, T. P

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On the Utility of Pooling Biological Samples in Microarray Experiments von Kendziorski, C., Irizarry, R. A., K.-S. Chen, Haag, J. D., Gould, M. N., Wahba, Grace

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Summaries of Affymetrix GeneChip probe level data von Irizarry, Rafael A., Bolstad, Benjamin M., Collin, Francois, Cope, Leslie M., Hobbs, Bridget, Speed, Terence P.

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Recognizing and Reducing Analytical Errors and Sources of Variation in Clinical Pathology Data in Safety Assessment Studies von Schultze, A. E., Irizarry, A. R.

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Exploration, normalization, and summaries of high density oligonucleotide array probe level data von Irizarry, Rafael A, Hobbs, Bridget, Collin, Francois, Beazer-Barclay, Yasmin D, Antonellis, Kristen J, Scherf, Uwe, Speed, Terence P

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Removing technical variability in RNA-seq data using conditional quantile normalization von Hansen, Kasper D., Irizarry, Rafael A., WU, Zhijin

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EphA2 overexpression causes tumorigenesis of mammary epithelial cells von ZELINSKI, Daniel P, ZANTEK, Nicole Dodge, STEWART, Jane C, IRIZARRY, Armando R, KINCH, Michael S

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affy—analysis of Affymetrix GeneChip data at the probe level von Gautier, Laurent, Cope, Leslie, Bolstad, Benjamin M., Irizarry, Rafael A.

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Exploration, normalization, and genotype calls of high-density oligonucleotide SNP array data von Carvalho, Benilton, Bengtsson, Henrik, Speed, Terence P, Irizarry, Rafael A

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Systemic Mastocytosis in an African Fat-Tail Gecko (Hemitheconyx caudicinctus) von Irizarry Rovira, A.R., Holzer, T.R., Credille, K.M.

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NID2 and HOXA9 promoter hypermethylation as biomarkers for prevention and early detection in oral cavity squamous cell carcinoma tissues and saliva von Guerrero-Preston, R, Soudry, E, Acero, J, Orera, M, Moreno-López, L, Macía-Colón, G, Jaffe, A, Berdasco, M, Ili-Gangas, C, Brebi-Mieville, P, Fu, Y, Engstrom, C, Irizarry, R A, Esteller, M, Westra, W, Koch, W, Califano, J, Sidransky, D

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Differential expression analysis of RNA-seq data at single-base resolution von Frazee, Alyssa C, Sabunciyan, Sarven, Hansen, Kasper D, Irizarry, Rafael A, Leek, Jeffrey T

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Stochastic models inspired by hybridization theory for short oligonucleotide arrays von Wu, Zhijin, Irizarry, Rafael A

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Redefining CpG islands using hidden Markov models von Wu, Hao, Caffo, Brian, Jaffee, Harris A, Irizarry, Rafael A, Feinberg, Andrew P

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Travelling waves in the occurrence of dengue haemorrhagic fever in Thailand von Burke, Donald S, Cummings, Derek A.T, Irizarry, Rafael A, Huang, Norden E, Endy, Timothy P, Nisalak, Ananda, Ungchusak, Kumnuan

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Histology of ferret skin: preweaning to adulthood von Martin, A.L, Irizarry-Rovira, A.R, Bevier, D.E, Glickman, L.G, Glickman, N.W, Hullinger, R.L

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A benchmark for Affymetrix GeneChip expression measures von Cope, Leslie M., Irizarry, Rafael A., Jaffee, Harris A., Wu, Zhijin, Speed, Terence P.

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Gonadoblastoma in the Ovaries of a Lesser Galago (Galago senegalensis braccatus) von Irizarry Rovira, A.R., Lynch, S., David, M., Ramos Vara, J.A.

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Significance analysis and statistical dissection of variably methylated regions von Jaffe, Andrew E., Feinberg, Andrew P., Irizarry, Rafael A., Leek, Jeffrey T.

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