Landscape of the complete RNA chemical modifications in the human 80S ribosome von Taoka, Masato, Nobe, Yuko, Yamaki, Yuka, Sato, Ko, Ishikawa, Hideaki, Izumikawa, Keiichi, Yamauchi, Yoshio, Hirota, Kouji, Nakayama, Hiroshi, Takahashi, Nobuhiro, Isobe, Toshiaki

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Rab2a and Rab27a cooperatively regulate the transition from granule maturation to exocytosis through the dual effector Noc2 von Matsunaga, Kohichi, Taoka, Masato, Isobe, Toshiaki, Izumi, Tetsuro

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Dynamic RNA acetylation revealed by quantitative cross-evolutionary mapping von Sas-Chen, Aldema, Thomas, Justin M., Matzov, Donna, Taoka, Masato, Nance, Kellie D., Nir, Ronit, Bryson, Keri M., Shachar, Ran, Liman, Geraldy L. S., Burkhart, Brett W., Gamage, Supuni Thalalla, Nobe, Yuko, Briney, Chloe A., Levy, Michaella J., Fuchs, Ryan T., Robb, G. Brett, Hartmann, Jesse, Sharma, Sunny, Lin, Qishan, Florens, Laurence, Washburn, Michael P., Isobe, Toshiaki, Santangelo, Thomas J., Shalev-Benami, Moran, Meier, Jordan L., Schwartz, Schraga

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Direct Identification of Human Cellular MicroRNAs by Nanoflow Liquid Chromatography–High-Resolution Tandem Mass Spectrometry and Database Searching von Nakayama, Hiroshi, Yamauchi, Yoshio, Taoka, Masato, Isobe, Toshiaki

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Structural Analyses of Toll-like Receptor 7 Reveal Detailed RNA Sequence Specificity and Recognition Mechanism of Agonistic Ligands von Zhang, Zhikuan, Ohto, Umeharu, Shibata, Takuma, Taoka, Masato, Yamauchi, Yoshio, Sato, Ryota, Shukla, Nikunj M., David, Sunil A., Isobe, Toshiaki, Miyake, Kensuke, Shimizu, Toshiyuki

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S1P-S1PR2 Axis Mediates Homing of Muse Cells into Damaged Heart for Long Lasting Tissue Repair and Functional Recovery After Acute Myocardial Infarction von Yamada, Yoshihisa, Wakao, Shohei, Kushida, Yoshihiro, Minatoguchi, Shingo, Mikami, Atsushi, Higashi, Kenshi, Baba, Shinya, Shigemoto, Taeko, Kuroda, Yasumasa, Kanamori, Hiromitsu, Amin, Mohamad, Kawasaki, Masanori, Nishigaki, Kazuhiko, Taoka, Masato, Isobe, Toshiaki, Muramatsu, Chisako, Dezawa, Mari, Minatoguchi, Shinya

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Atomic resolution snapshot of Leishmania ribosome inhibition by the aminoglycoside paromomycin von Shalev-Benami, Moran, Zhang, Yan, Rozenberg, Haim, Nobe, Yuko, Taoka, Masato, Matzov, Donna, Zimmerman, Ella, Bashan, Anat, Isobe, Toshiaki, Jaffe, Charles L., Yonath, Ada, Skiniotis, Georgios

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Method for Direct Mass-Spectrometry-Based Identification of Monomethylated RNA Nucleoside Positional Isomers and Its Application to the Analysis of Leishmania rRNA von Nakayama, Hiroshi, Yamauchi, Yoshio, Nobe, Yuko, Sato, Ko, Takahashi, Nobuhiro, Shalev-Benami, Moran, Isobe, Toshiaki, Taoka, Masato

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A single pseudouridine on rRNA regulates ribosome structure and function in the mammalian parasite Trypanosoma brucei von Rajan, K. Shanmugha, Madmoni, Hava, Bashan, Anat, Taoka, Masato, Aryal, Saurav, Nobe, Yuko, Doniger, Tirza, Galili Kostin, Beathrice, Blumberg, Amit, Cohen-Chalamish, Smadar, Schwartz, Schraga, Rivalta, Andre, Zimmerman, Ella, Unger, Ron, Isobe, Toshiaki, Yonath, Ada, Michaeli, Shulamit

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Mass spectrometric identification of N -linked glycopeptides using lectin-mediated affinity capture and glycosylation site-specific stable isotope tagging von Isobe, Toshiaki, Kaji, Hiroyuki, Yamauchi, Yoshio, Takahashi, Nobuhiro

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Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis von Matzov, Donna, Taoka, Masato, Nobe, Yuko, Yamauchi, Yoshio, Halfon, Yehuda, Asis, Nofar, Zimermann, Ella, Rozenberg, Haim, Bashan, Anat, Bhushan, Shashi, Isobe, Toshiaki, Gray, Michael W, Yonath, Ada, Shalev-Benami, Moran

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Damage sensing mediated by serine proteases Hayan and Persephone for Toll pathway activation in apoptosis-deficient flies von Nakano, Shotaro, Kashio, Soshiro, Nishimura, Kei, Takeishi, Asuka, Kosakamoto, Hina, Obata, Fumiaki, Kuranaga, Erina, Chihara, Takahiro, Yamauchi, Yoshio, Isobe, Toshiaki, Miura, Masayuki

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TDP-43 regulates site-specific 2′-O-methylation of U1 and U2 snRNAs via controlling the Cajal body localization of a subset of C/D scaRNAs von Izumikawa, Keiichi, Nobe, Yuko, Ishikawa, Hideaki, Yamauchi, Yoshio, Taoka, Masato, Sato, Ko, Nakayama, Hiroshi, Simpson, Richard J, Isobe, Toshiaki, Takahashi, Nobuhiro

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Low-fluence blue light-induced phosphorylation of Zmphot1 mediates the first positive phototropism von Suzuki, Hiromi, Koshiba, Tomokazu, Fujita, Chiharu, Yamauchi, Yoshio, Kimura, Taro, Isobe, Toshiaki, Sakai, Tatsuya, Taoka, Masato, Okamoto, Takashi

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A mass spectrometry-based method for direct determination of pseudouridine in RNA von Yamauchi, Yoshio, Nobe, Yuko, Izumikawa, Keiichi, Higo, Daisuke, Yamagishi, Yoko, Takahashi, Nobuhiro, Nakayama, Hiroshi, Isobe, Toshiaki, Taoka, Masato

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Identification of the neuroblastoma-amplified gene product as a component of the syntaxin 18 complex implicated in Golgi-to-endoplasmic reticulum retrograde transport von Aoki, Takehiro, Ichimura, Sarah, Itoh, Ayano, Kuramoto, Mami, Shinkawa, Takashi, Isobe, Toshiaki, Tagaya, Mitsuo

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TDP-43 stabilises the processing intermediates of mitochondrial transcripts von Izumikawa, Keiichi, Nobe, Yuko, Yoshikawa, Harunori, Ishikawa, Hideaki, Miura, Yutaka, Nakayama, Hiroshi, Nonaka, Takashi, Hasegawa, Masato, Egawa, Naohiro, Inoue, Haruhisa, Nishikawa, Kouki, Yamano, Koji, Simpson, Richard J., Taoka, Masato, Yamauchi, Yoshio, Isobe, Toshiaki, Takahashi, Nobuhiro

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Denaturing reversed phase liquid chromatographic separation of non-coding ribonucleic acids on macro-porous polystyrene-divinylbenzene resins von Yamauchi, Yoshio, Taoka, Masato, Nobe, Yuko, Izumikawa, Keiichi, Takahashi, Nobuhiro, Nakayama, Hiroshi, Isobe, Toshiaki

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Poly(A)-specific ribonuclease regulates the processing of small-subunit rRNAs in human cells von Ishikawa, Hideaki, Yoshikawa, Harunori, Izumikawa, Keiichi, Miura, Yutaka, Taoka, Masato, Nobe, Yuko, Yamauchi, Yoshio, Nakayama, Hiroshi, Simpson, Richard J, Isobe, Toshiaki, Takahashi, Nobuhiro

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Structural and mechanistic insights into the function of Leishmania ribosome lacking a single pseudouridine modification von Rajan, K. Shanmugha, Aryal, Saurav, Hiregange, Disha-Gajanan, Bashan, Anat, Madmoni, Hava, Olami, Mika, Doniger, Tirza, Cohen-Chalamish, Smadar, Pescher, Pascal, Taoka, Masato, Nobe, Yuko, Fedorenko, Aliza, Bose, Tanaya, Zimermann, Ella, Prina, Eric, Aharon-Hefetz, Noa, Pilpel, Yitzhak, Isobe, Toshiaki, Unger, Ron, Späth, Gerald F., Yonath, Ada, Michaeli, Shulamit

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