SUPPA2: fast, accurate, and uncertainty-aware differential splicing analysis across multiple conditions von Trincado, Juan L, Entizne, Juan C, Hysenaj, Gerald, Singh, Babita, Skalic, Miha, Elliott, David J, Eyras, Eduardo

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Androgen-regulated transcription of ESRP2 drives alternative splicing patterns in prostate cancer von Munkley, Jennifer, Li, Ling, Krishnan, S R Gokul, Hysenaj, Gerald, Scott, Emma, Dalgliesh, Caroline, Oo, Htoo Zarni, Maia, Teresa Mendes, Cheung, Kathleen, Ehrmann, Ingrid, Livermore, Karen E, Zielinska, Hanna, Thompson, Oliver, Knight, Bridget, McCullagh, Paul, McGrath, John, Crundwell, Malcolm, Harries, Lorna W, Daugaard, Mads, Cockell, Simon, Barbosa-Morais, Nuno L, Oltean, Sebastian, Elliott, David J

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An anciently diverged family of RNA binding proteins maintain correct splicing of a class of ultra-long exons through cryptic splice site repression von Siachisumo, Chileleko, Luzzi, Sara, Aldalaqan, Saad, Hysenaj, Gerald, Dalgliesh, Caroline, Cheung, Kathleen, Gazzara, Matthew R, Yonchev, Ivaylo D, James, Katherine, Kheirollahi Chadegani, Mahsa, Ehrmann, Ingrid E, Smith, Graham R, Cockell, Simon J, Munkley, Jennifer, Wilson, Stuart A, Barash, Yoseph, Elliott, David J

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The role of GCNT1 mediated O-glycosylation in aggressive prostate cancer von Hodgson, Kirsty, Orozco-Moreno, Margarita, Scott, Emma, Garnham, Rebecca, Livermore, Karen, Thomas, Huw, Zhou, Yuhan, He, Jiepei, Bermudez, Abel, Garcia Marques, Fernando Jose, Bastian, Kayla, Hysenaj, Gerald, Archer Goode, Emily, Heer, Rakesh, Pitteri, Sharon, Wang, Ning, Elliott, David J., Munkley, Jennifer

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Targeted allelic expression profiling in human islets identifies cis-regulatory effects for multiple variants identified by type 2 diabetes genome-wide association studies von Locke, Jonathan M, Hysenaj, Gerald, Wood, Andrew R, Weedon, Michael N, Harries, Lorna W

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Transformer2 proteins protect breast cancer cells from accumulating replication stress by ensuring productive splicing of checkpoint kinase 1 von Best, Andrew, James, Katherine, Hysenaj, Gerald, Tyson-Capper, Alison, Elliott, David J.

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RBMX family proteins connect the fields of nuclear RNA processing, disease and sex chromosome biology von Elliott, David J., Dalgliesh, Caroline, Hysenaj, Gerald, Ehrmann, Ingrid

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GCK gene mutations are a common cause of childhood-onset MODY (maturity-onset diabetes of the young) in Turkey von Haliloglu, Belma, Hysenaj, Gerald, Atay, Zeynep, Guran, Tulay, Abalı, Saygın, Turan, Serap, Bereket, Abdullah, Ellard, Sian

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Upregulation of GALNT7 in prostate cancer modifies O-glycosylation and promotes tumour growth von Scott, Emma, Hodgson, Kirsty, Calle, Beatriz, Turner, Helen, Cheung, Kathleen, Bermudez, Abel, Marques, Fernando Jose Garcia, Pye, Hayley, Yo, Edward Christopher, Islam, Khirul, Oo, Htoo Zarni, McClurg, Urszula L., Wilson, Laura, Thomas, Huw, Frame, Fiona M., Orozco-Moreno, Margarita, Bastian, Kayla, Arredondo, Hector M., Roustan, Chloe, Gray, Melissa Anne, Kelly, Lois, Tolson, Aaron, Mellor, Ellie, Hysenaj, Gerald, Goode, Emily Archer, Garnham, Rebecca, Duxfield, Adam, Heavey, Susan, Stopka-Farooqui, Urszula, Haider, Aiman, Freeman, Alex, Singh, Saurabh, Johnston, Edward W., Punwani, Shonit, Knight, Bridget, McCullagh, Paul, McGrath, John, Crundwell, Malcolm, Harries, Lorna, Bogdan, Denisa, Westaby, Daniel, Fowler, Gemma, Flohr, Penny, Yuan, Wei, Sharp, Adam, de Bono, Johann, Maitland, Norman J., Wisnovsky, Simon, Bertozzi, Carolyn R., Heer, Rakesh, Guerrero, Ramon Hurtado, Daugaard, Mads, Leivo, Janne, Whitaker, Hayley, Pitteri, Sharon, Wang, Ning, Elliott, David J., Schumann, Benjamin, Munkley, Jennifer

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ST6GAL1‐mediated aberrant sialylation promotes prostate cancer progression von Scott, Emma, Archer Goode, Emily, Garnham, Rebecca, Hodgson, Kirsty, Orozco‐Moreno, Margarita, Turner, Helen, Livermore, Karen, Putri Nangkana, Kyla, Frame, Fiona M, Bermudez, Abel, Jose Garcia Marques, Fernando, McClurg, Urszula L, Wilson, Laura, Thomas, Huw, Buskin, Adriana, Hepburn, Anastasia, Duxfield, Adam, Bastian, Kayla, Pye, Hayley, Arredondo, Hector M, Hysenaj, Gerald, Heavey, Susan, Stopka‐Farooqui, Urszula, Haider, Aiman, Freeman, Alex, Singh, Saurabh, Johnston, Edward W, Punwani, Shonit, Knight, Bridget, McCullagh, Paul, McGrath, John, Crundwell, Malcolm, Harries, Lorna, Heer, Rakesh, Maitland, Norman J, Whitaker, Hayley, Pitteri, Sharon, Troyer, Dean A, Wang, Ning, Elliott, David J, Drake, Richard R, Munkley, Jennifer

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An anciently diverged family of RNA binding proteins maintain correct splicing of a class of ultra-long exons through cryptic splice site repression von Siachisumo, Chileleko, Luzzi, Sara, Aldalaqan, Saad, Hysenaj, Gerald, Dalgliesh, Caroline, Cheung, Kathleen, Gazzara, Matthew R, Yonchev, Ivaylo D, James, Katherine, Kheirollahi Chadegani, Mahsa, Ehrmann, Ingrid E, Smith, Graham R, Cockell, Simon J, Munkley, Jennifer, Wilson, Stuart A, Barash, Yoseph, Elliott, David J

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SUPPA2: fast, accurate, and uncertainty-aware differential splicing analysis across multiple conditions von Trincado Alonso, Juan Luis, 1987, Entizne, Juan Carlos, Hysenaj, Gerald, Singh, Babita, 1986, Skalic, Miha, 1990, Elliott, David, 1947, Eyras Jiménez, Eduardo

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Sialic acid blockade inhibits the metastatic spread of prostate cancer to bone von Hodgson, Kirsty, Orozco-Moreno, Margarita, Goode, Emily Archer, Fisher, Matthew, Garnham, Rebecca, Beatson, Richard, Turner, Helen, Livermore, Karen, Zhou, Yuhan, Wilson, Laura, Visser, Eline A., Pijnenborg, Johan FA, Eerden, Nienke, Moons, Sam J., Rossing, Emiel, Hysenaj, Gerald, Krishna, Rashi, Peng, Ziqian, Nangkana, Kyla Putri, Schmidt, Edward N., Duxfield, Adam, Dennis, Ella P., Heer, Rakesh, Lawson, Michelle A., Macauley, Matthew, Elliott, David J., Büll, Christian, Scott, Emma, Boltje, Thomas J., Drake, Richard R., Wang, Ning, Munkley, Jennifer

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Sialic acid blockade inhibits the metastatic spread of prostate cancer to boneResearch in context von Kirsty Hodgson, Margarita Orozco-Moreno, Emily Archer Goode, Matthew Fisher, Rebecca Garnham, Richard Beatson, Helen Turner, Karen Livermore, Yuhan Zhou, Laura Wilson, Eline A. Visser, Johan FA. Pijnenborg, Nienke Eerden, Sam J. Moons, Emiel Rossing, Gerald Hysenaj, Rashi Krishna, Ziqian Peng, Kyla Putri Nangkana, Edward N. Schmidt, Adam Duxfield, Ella P. Dennis, Rakesh Heer, Michelle A. Lawson, Matthew Macauley, David J. Elliott, Christian Büll, Emma Scott, Thomas J. Boltje, Richard R. Drake, Ning Wang, Jennifer Munkley

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Upregulation of GALNT7 in prostate cancer modifies O-glycosylation and promotes tumour growth von Scott, Emma, Hodgson, Kirsty, Calle, Beatriz, Turner, Helen, Cheung, Kathleen, Bermudez, Abel, Garcia Marques, Fernando Jose, Pye, Hayley, Yo, Edward Christopher, Islam, Khirul, Oo, Htoo Zarni, McClurg, Urszula L, Wilson, Laura, Thomas, Huw, Frame, Fiona M, Orozco-Moreno, Margarita, Bastian, Kayla, Arredondo, Hector M, Roustan, Chloe, Gray, Melissa Anne, Kelly, Lois, Tolson, Aaron, Mellor, Ellie, Hysenaj, Gerald, Goode, Emily Archer, Garnham, Rebecca, Duxfield, Adam, Heavey, Susan, Stopka-Farooqui, Urszula, Haider, Aiman, Freeman, Alex, Singh, Saurabh, Johnston, Edward W, Punwani, Shonit, Knight, Bridget, McCullagh, Paul, McGrath, John, Crundwell, Malcolm, Harries, Lorna, Bogdan, Denisa, Westaby, Daniel, Fowler, Gemma, Flohr, Penny, Yuan, Wei, Sharp, Adam, de Bono, Johann, Maitland, Norman J, Wisnovsky, Simon, Bertozzi, Carolyn R, Heer, Rakesh, Hurtado Guerrero, Ramon, Daugaard, Mads, Leivo, Janne, Whitaker, Hayley, Pitteri, Sharon, Wang, Ning, Elliott, David J, Schumann, Benjamin, Munkley, Jennifer

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Additional file 2: of SUPPA2: fast, accurate, and uncertainty-aware differential splicing analysis across multiple conditions von Trincado, Juan, Entizne, Juan, Hysenaj, Gerald, Singh, Babita, Skalic, Miha, Elliott, David, Eyras, Eduardo

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