Guidelines for the functional annotation of microRNAs using the Gene Ontology von Huntley, Rachael P, Sitnikov, Dmitry, Orlic-Milacic, Marija, Balakrishnan, Rama, D'Eustachio, Peter, Gillespie, Marc E, Howe, Doug, Kalea, Anastasia Z, Maegdefessel, Lars, Osumi-Sutherland, David, Petri, Victoria, Smith, Jennifer R, Van Auken, Kimberly, Wood, Valerie, Zampetaki, Anna, Mayr, Manuel, Lovering, Ruth C

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GWAS and colocalization analyses implicate carotid intima-media thickness and carotid plaque loci in cardiovascular outcomes von Franceschini, N, Giambartolomei, C, De Vries, PS, Finan, C, Bis, JC, Lovering, RC, Tajuddin, SM, Graff, M, Kavousi, M, Dale, C, Smith, AV, Hofer, E, Lu, L, Scholz, M, Sargurupremraj, M, Franzén, O, Joshi, PK, Noordam, R, Marioni, RE, Hwang, S-J, Schminke, U, Palmas, W, Isaacs, A, Hofman, A, Teumer, A, Cox, AJ, Wong, A, Smit, AJ, Britton, A, Ruusalepp, A, Penninx, BW, Wassel, CL, Baldassarre, D, O'Leary, DH, Kuh, D, Tremoli, E, Mannarino, E, Boerwinkle, E, Schadt, EE, Ingelsson, E, Veglia, F, Beutner, F, Chauhan, G, Snieder, H, Campbell, H, Völzke, H, Markus, HS, Deary, IJ, Price, J, Pott, J, Liang, J, Engmann, J, Rice, K, Dhana, K, Kiemeney, LALM, Lind, L, Raffield, LM, Launer, LJ, Holdt, LM, Traylor, M, Sitzer, M, Kivimaki, M, Nalls, MA, Melander, O, Raitakari, O, Franco, OH, Roussos, P, Whincup, PH, Giral, P, Wong, Q, Hardy, R, Wannamethee, SG, Hägg, S, Shah, S, McLachlan, S, Seshadri, S, Heckbert, SR, Ring, S, Harris, TB, Lehtimäki, T, Shah, T, Plagnol, V, Rosamond, WD, Saba, Y, MEGASTROKE Consortium, Dehghan, A, Seldenrijk, A, Hamsten, A, Van Duijn, CM, Lawlor, DA, Bowden, DW, Schmidt, H, Wilson, JF, Wilson, JG, Lyytikäinen, L-P, Loeffler, M, Humphries, SE, Hingorani, AD, Björkegren, JLM, Casas, JP

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The plant cell cycle von Huntley, Rachael P, Murray, James AH

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An expanded evaluation of protein function prediction methods shows an improvement in accuracy von Jiang, Y, Oron, TR, Clark, WT, Bankapur, AR, D'Andrea, D, Lepore, R, Funk, CS, Kahanda, I, Verspoor, KM, Ben-Hur, A, Koo, DCE, Penfold-Brown, D, Youngs, N, Bonneau, R, Lin, A, Sahraeian, SME, Martelli, PL, Profiti, G, Casadio, R, Cao, R, Zhong, Z, Cheng, J, Skunca, N, Dogan, T, Hakala, K, Mehryary, F, Ginter, F, Fang, H, Smithers, B, Gough, J, Koskinen, P, Chen, C-T, Cozzetto, D, Minneci, F, Jones, DT, Dukka, BKC, Khan, IK, Kihara, D, Ofer, D, Rappoport, N, Stern, A, Cibrian-Uhalte, E, Denny, P, Foulger, RE, Legge, D, Lovering, RC, Magrane, M, Melidoni, AN, Pichler, K, Shypitsyna, A, Li, B, ElShal, S, Dawson, NL, Sillitoe, I, Bhat, P, Nepusz, T, Paccanaro, A, Pavlidis, P, Feng, S, Cejuela, JM, Goldberg, T, Richter, L, Gabaldon, T, Supek, F, Gong, Q, Ning, W, Tian, W, Fontana, P, Toppo, S, Ferrari, C, Giollo, M, Piovesan, D, Del Pozo, A, Benso, A, Politano, G, Savino, A, Rehman, HU, Valentini, G, Bargsten, JW, Gemovic, B, Perovic, V, Almeida-e-Silva, DC, Vencio, RZN, Sharan, M, Vogel, J, Kansakar, L, Zhang, S, Vucetic, S, Wang, Z, Sternberg, MJE, Huntley, RP, Martin, MJ, O'Donovan, C, Robinson, PN, Moreau, Y, Linial, M, Orengo, CA, Rost, B, Greene, CS, Radivojac, P

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Cytokinins and gibberellins in sap exudate of the oil palm von Huntley, Rachael P, Jones, Laurence H, Hanke, David E

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Gene Ontology Curation of Neuroinflammation Biology Improves the Interpretation of Alzheimer's Disease Gene Expression Data von Kramarz, B, Huntley, RP, Rodríguez-López, M, Roncaglia, P, Saverimuttu, SCC, Parkinson, H, Bandopadhyay, R, Martin, M-J, Orchard, S, Hooper, NM, Brough, D, Lovering, RC

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Expanding the horizons of microRNA bioinformatics von Huntley, RP, Kramarz, B, Sawford, T, Umrao, Z, Kalea, AZ, Acquaah, V, Martin, M-J, Mayr, M, Lovering, RC

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MicroRNA Biomarkers and Platelet Reactivity: The Clot Thickens von Sunderland, N, Skroblin, P, Barwari, T, Huntley, RP, Lu, R, Joshi, A, Lovering, RC, Mayr, M

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Improving the Gene Ontology Resource to Facilitate More Informative Analysis and Interpretation of Alzheimer's Disease Data von Kramarz, B, Roncaglia, P, Meldal, BHM, Huntley, RP, Martin, MJ, Orchard, S, Parkinson, H, Brough, D, Bandopadhyay, R, Hooper, NM, Lovering, RC

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Annotation extensions von Huntley, RP, Lovering, RC

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Annotation of gene product function from high-throughput studies using the Gene Ontology von Attrill, H, Gaudet, P, Huntley, RP, Lovering, RC, Engel, SR, Poux, S, Van Auken, KM, Georghiou, G, Chibucos, MC, Berardini, TZ, Wood, V, Drabkin, H, Fey, P, Garmiri, P, Harris, MA, Sawford, T, Reiser, L, Tauber, R, Toro, S, Gene Ontology Consortium

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The Gene Ontology of eukaryotic cilia and flagella von Roncaglia, P, van Dam, TJP, Christie, KR, Nacheva, L, Toedt, G, Huynen, MA, Huntley, RP, Gibson, TJ, Lomax, J

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Improving Interpretation of Cardiac Phenotypes and Enhancing Discovery With Expanded Knowledge in the Gene Ontology von Lovering, RC, Roncaglia, P, Howe, DG, Laulederkind, SJF, Khodiyar, VK, Berardini, TZ, Tweedie, S, Foulger, RE, Osumi-Sutherland, D, Campbell, NH, Huntley, RP, Talmud, PJ, Blake, JA, Breckenridge, R, Riley, PR, Lambiase, PD, Elliott, PM, Clapp, L, Tinker, A, Hill, DP

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Gene regulation knowledge commons: community action takes care of DNA binding transcription factors von Tripathi, S, Vercruysse, S, Chawla, K, Christie, KR, Blake, JA, Huntley, RP, Orchard, S, Hermjakob, H, Thommesen, L, Lægreid, A, Kuiper, M

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RNAcentral: a hub of information for non-coding RNA sequences (vol 47, pg D221, 2019) von Sweeney, BA, Petrov, AI, Burkov, B, Finn, RD, Bateman, A, Szymanski, M, Karlowski, WM, Gorodkin, J, Seemann, SE, Cannone, JJ, Gutell, RR, Fey, P, Basu, S, Kay, S, Cochrane, G, Billis, K, Emmert, D, Marygold, SJ, Huntley, RP, Lovering, RC, Frankish, A, Chan, PP, Lowe, TM, Bruford, E, Seal, R, Vandesompele, J, Volders, P-J, Paraskevopoulou, M, Ma, L, Zhang, Z, Griffiths-Jones, S, Bujnicki, JM, Boccaletto, P, Blake, JA, Bult, CJ, Chen, R, Zhao, Y, Wood, V, Rutherford, K, Rivas, E, Cole, J, Laulederkind, SJF, Shimoyama, M, Gillespie, ME, Orlic-Milacic, M, Kalvari, I, Nawrocki, E, Engel, SR, Cherry, JM, Berardini, TZ, Hatzigeorgiou, A, Karagkouni, D, Howe, K, Davis, P, Dinger, M, He, S, Yoshihama, M, Kenmochi, N, Stadler, PF, Williams, KP

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GWAS and colocalization analyses implicate carotid intima-media thickness and carotid plaque loci in cardiovascular outcomes von Franceschini, N, Giambartolomei, C, de Vries, PS, Bis, JC, Lovering, RC, Tajuddin, SM, Graff, M, Kavousi, M, Dale, C, Smith, AV, Hofer, E, Lu, L, Scholz, M, Sargurupremraj, M, Franzén, O, Joshi, PK, Noordam, R, Marioni, RE, Hwang, S-J, Schminke, U, Palmas, W, Isaacs, A, Hofman, A, Teumer, A, Cox, AJ, Wong, A, Smit, AJ, Britton, A, Ruusalepp, A, Penninx, BW, Wassel, CL, Baldassarre, D, O'Leary, DH, Kuh, D, Tremoli, E, Mannarino, E, Boerwinkle, E, Schadt, EE, Ingelsson, E, Veglia, F, Beutner, F, Chauhan, G, Snieder, H, Campbell, H, Völzke, H, Markus, HS, Deary, IJ, de Graaf, J, Price, J, Pott, J, Liang, J, Engmann, J, Rice, K, Dhana, K, Kiemeney, LALM, Lind, L, Raffield, LM, Launer, LJ, Holdt, LM, Traylor, M, Sitzer, M, Kivimaki, M, Nalls, MA, Melander, O, Raitakari, O, Franco, OH, Roussos, P, Whincup, PH, Giral, P, Wong, Q, Hardy, R, Wannamethee, SG, Hägg, S, Shah, S, McLachlan, S, Seshadri, S, Heckbert, SR, Ring, S, Harris, TB, Lehtimäki, T, Shah, T, Plagnol, V, Rosamond, WD, Saba, Y, MEGASTROKE Consortium, Dehghan, A, Seldenrijk, A, Hamsten, A, van Duijn, CM, Lawlor, DA, Bowden, DW, Schmidt, H, Wilson, JF, Wilson, JG, Lyytikäinen, L-P, Loeffler, M, Humphries, SE, Hingorani, AD, Björkegren, JLM, Casas, JP

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The cardiovascular gene annotation initiative: Impact on data analysis von Lovering, RC, Rodriguez-Lopez, M, Campbell, NH, Huntley, RP, Sawford, T, O'Donovan, C, Orchard, S, Hermjakob, H, Martin, M, Mayr, M, Humphries, SE, Talmud, PJ

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Guidelines for the functional annotation of microRNAs using the Gene Ontology von Huntley, RP, Sitnikov, D, Orlic-Milacic, M, Balakrishnan, R, D'Eustachio, P, Gillespie, ME, Howe, D, Kalea, AZ, Maegdefessel, L, Osumi-Sutherland, D, Petri, V, Smith, JR, Van Auken, K, Wood, V, Zampetaki, A, Mayr, M, Lovering, RC

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Representing Kidney Development Using the Gene Ontology von Alam-Faruque, Y, Hill, DP, Dimmer, EC, Harris, MA, Foulger, RE, Tweedie, S, Attrill, H, Howe, DG, Thomas, SR, Davidson, D, Woolf, AS, Blake, JA, Mungall, CJ, O’Donovan, C, Apweiler, R, Huntley, RP

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A method for increasing expressivity of Gene Ontology annotations using a compositional approach von Huntley, RP, Harris, MA, Alam-Faruque, Y, Blake, JA, Carbon, S, Dietze, H, Dimmer, EC, Foulger, RE, Hill, DP, Khodiyar, VK, Lock, A, Lomax, J, Lovering, RC, Mutowo-Meullenet, P, Sawford, T, Van Auken, K, Wood, V, Mungall, CJ

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