The AAV capsid can influence the epigenetic marking of rAAV delivered episomal genomes in a species dependent manner von Gonzalez-Sandoval, Adriana, Pekrun, Katja, Tsuji, Shinnosuke, Zhang, Feijie, Hung, King L., Chang, Howard Y., Kay, Mark A.

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Engineering Protein-Secreting Plasma Cells by Homology-Directed Repair in Primary Human B Cells von Hung, King L., Meitlis, Iana, Hale, Malika, Chen, Chun-Yu, Singh, Swati, Jackson, Shaun W., Miao, Carol H., Khan, Iram F., Rawlings, David J., James, Richard G.

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Ex vivo engineered human plasma cells exhibit robust protein secretion and long-term engraftment in vivo von Cheng, Rene Yu-Hong, Hung, King L., Zhang, Tingting, Stoffers, Claire M., Ott, Andee R., Suchland, Emmaline R., Camp, Nathan D., Khan, Iram F., Singh, Swati, Yang, Ying-Jen, Rawlings, David J., James, Richard G.

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Genome-wide programmable transcriptional memory by CRISPR-based epigenome editing von Nuñez, James K., Chen, Jin, Pommier, Greg C., Cogan, J. Zachery, Replogle, Joseph M., Adriaens, Carmen, Ramadoss, Gokul N., Shi, Quanming, Hung, King L., Samelson, Avi J., Pogson, Angela N., Kim, James Y.S., Chung, Amanda, Leonetti, Manuel D., Chang, Howard Y., Kampmann, Martin, Bernstein, Bradley E., Hovestadt, Volker, Gilbert, Luke A., Weissman, Jonathan S.

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Gene regulation on extrachromosomal DNA von Hung, King L., Mischel, Paul S., Chang, Howard Y.

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The evolutionary dynamics of extrachromosomal DNA in human cancers von Lange, Joshua T., Rose, John C., Chen, Celine Y., Pichugin, Yuriy, Xie, Liangqi, Tang, Jun, Hung, King L., Yost, Kathryn E., Shi, Quanming, Erb, Marcella L., Rajkumar, Utkrisht, Wu, Sihan, Taschner-Mandl, Sabine, Bernkopf, Marie, Swanton, Charles, Liu, Zhe, Huang, Weini, Chang, Howard Y., Bafna, Vineet, Henssen, Anton G., Werner, Benjamin, Mischel, Paul S.

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ecDNA hubs drive cooperative intermolecular oncogene expression von Hung, King L., Yost, Kathryn E., Xie, Liangqi, Shi, Quanming, Helmsauer, Konstantin, Luebeck, Jens, Schöpflin, Robert, Lange, Joshua T., Chamorro González, Rocío, Weiser, Natasha E., Chen, Celine, Valieva, Maria E., Wong, Ivy Tsz-Lo, Wu, Sihan, Dehkordi, Siavash R., Duffy, Connor V., Kraft, Katerina, Tang, Jun, Belk, Julia A., Rose, John C., Corces, M. Ryan, Granja, Jeffrey M., Li, Rui, Rajkumar, Utkrisht, Friedlein, Jordan, Bagchi, Anindya, Satpathy, Ansuman T., Tjian, Robert, Mundlos, Stefan, Bafna, Vineet, Henssen, Anton G., Mischel, Paul S., Liu, Zhe, Chang, Howard Y.

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Targeted profiling of human extrachromosomal DNA by CRISPR-CATCH von Hung, King L., Luebeck, Jens, Dehkordi, Siavash R., Colón, Caterina I., Li, Rui, Wong, Ivy Tsz-Lo, Coruh, Ceyda, Dharanipragada, Prashanthi, Lomeli, Shirley H., Weiser, Natasha E., Moriceau, Gatien, Zhang, Xiao, Bailey, Chris, Houlahan, Kathleen E., Yang, Wenting, González, Rocío Chamorro, Swanton, Charles, Curtis, Christina, Jamal-Hanjani, Mariam, Henssen, Anton G., Law, Julie A., Greenleaf, William J., Lo, Roger S., Mischel, Paul S., Bafna, Vineet, Chang, Howard Y.

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Oncogene Convergence in Extrachromosomal DNA Hubs von Weiser, Natasha E, Hung, King L, Chang, Howard Y

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Parallel sequencing of extrachromosomal circular DNAs and transcriptomes in single cancer cells von Chamorro González, Rocío, Conrad, Thomas, Stöber, Maja C., Xu, Robin, Giurgiu, Mădălina, Rodriguez-Fos, Elias, Kasack, Katharina, Brückner, Lotte, van Leen, Eric, Helmsauer, Konstantin, Dorado Garcia, Heathcliff, Stefanova, Maria E., Hung, King L., Bei, Yi, Schmelz, Karin, Lodrini, Marco, Mundlos, Stefan, Chang, Howard Y., Deubzer, Hedwig E., Sauer, Sascha, Eggert, Angelika, Schulte, Johannes H., Schwarz, Roland F., Haase, Kerstin, Koche, Richard P., Henssen, Anton G.

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Coordinated inheritance of extrachromosomal DNAs in cancer cells von Hung, King L., Jones, Matthew G., Wong, Ivy Tsz-Lo, Curtis, Ellis J., Lange, Joshua T., He, Britney Jiayu, Luebeck, Jens, Schmargon, Rachel, Scanu, Elisa, Brückner, Lotte, Yan, Xiaowei, Li, Rui, Gnanasekar, Aditi, Chamorro González, Rocío, Belk, Julia A., Liu, Zhonglin, Melillo, Bruno, Bafna, Vineet, Dörr, Jan R., Werner, Benjamin, Huang, Weini, Cravatt, Benjamin F., Henssen, Anton G., Mischel, Paul S., Chang, Howard Y.

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A Functional Taxonomy of Tumor Suppression in Oncogenic KRAS-Driven Lung Cancer von Cai, Hongchen, Chew, Su Kit, Li, Chuan, Tsai, Min K, Andrejka, Laura, Murray, Christopher W, Hughes, Nicholas W, Shuldiner, Emily G, Ashkin, Emily L, Tang, Rui, Hung, King L, Chen, Leo C, Lee, Shi Ya C, Yousefi, Maryam, Lin, Wen-Yang, Kunder, Christian A, Cong, Le, McFarland, Christopher D, Petrov, Dmitri A, Swanton, Charles, Winslow, Monte M

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Wnt signaling and tbx16 form a bistable switch to commit bipotential progenitors to mesoderm von Bouldin, Cortney M, Manning, Alyssa J, Peng, Yu-Hsuan, Farr, 3rd, Gist H, Hung, King L, Dong, Alice, Kimelman, David

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Circular extrachromosomal DNA promotes tumor heterogeneity in high-risk medulloblastoma von Chapman, Owen S., Luebeck, Jens, Sridhar, Sunita, Wong, Ivy Tsz-Lo, Dixit, Deobrat, Wang, Shanqing, Prasad, Gino, Rajkumar, Utkrisht, Pagadala, Meghana S., Larson, Jon D., He, Britney Jiayu, Hung, King L., Lange, Joshua T., Dehkordi, Siavash R., Chandran, Sahaana, Adam, Miriam, Morgan, Ling, Wani, Sameena, Tiwari, Ashutosh, Guccione, Caitlin, Lin, Yingxi, Dutta, Aditi, Lo, Yan Yuen, Juarez, Edwin, Robinson, James T., Korshunov, Andrey, Michaels, John-Edward A., Cho, Yoon-Jae, Malicki, Denise M., Coufal, Nicole G., Levy, Michael L., Hobbs, Charlotte, Scheuermann, Richard H., Crawford, John R., Pomeroy, Scott L., Rich, Jeremy N., Zhang, Xinlian, Chang, Howard Y., Dixon, Jesse R., Bagchi, Anindya, Deshpande, Aniruddha J., Carter, Hannah, Fraenkel, Ernest, Mischel, Paul S., Wechsler-Reya, Robert J., Bafna, Vineet, Mesirov, Jill P., Chavez, Lukas

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Origins and impact of extrachromosomal DNA von Bailey, Chris, Pich, Oriol, Thol, Kerstin, Watkins, Thomas B. K., Luebeck, Jens, Rowan, Andrew, Stavrou, Georgia, Weiser, Natasha E., Dameracharla, Bhargavi, Bentham, Robert, Lu, Wei-Ting, Kittel, Jeanette, Yang, S. Y. Cindy, Howitt, Brooke E., Sharma, Natasha, Litovchenko, Maria, Salgado, Roberto, Hung, King L., Cornish, Alex J., Moore, David A., Houlston, Richard S., Bafna, Vineet, Chang, Howard Y., Nik-Zainal, Serena, Kanu, Nnennaya, McGranahan, Nicholas, Flanagan, Adrienne M., Mischel, Paul S., Jamal-Hanjani, Mariam, Swanton, Charles

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Profiling oncogenic extra-chromosomal DNA in cancer

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Profiling oncogenic extrachromosomal DNA in cancer von Hung, King L, Chang, Howard Y

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CoRAL Accurately Resolves Extrachromosomal DNA Genome Structures with Long-Read Sequencing von Zhu, Kaiyuan, Jones, Matthew G., Luebeck, Jens, Bu, Xinxin, Yi, Hyerim, Hung, King L., Wong, Ivy Tsz-Lo, Zhang, Shu, Mischel, Paul S., Chang, Howard Y., Bafna, Vineet

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Origins and impact of extrachromosomal DNA von Bailey, Chris, Pich, Oriol, Thol, Kerstin, Watkins, Thomas B K, Luebeck, Jens, Rowan, Andrew, Stavrou, Georgia, Weiser, Natasha E, Dameracharla, Bhargavi, Bentham, Robert, Lu, Wei-ting, Kittel, Jeanette, Yang, S Y Cindy, Howitt, Brooke E, Sharma, Natasha, Litovchenko, Maria, Salgado, Roberto, Hung, King L, Cornish, Alex J, Moore, David A, Houlston, Richard S, Bafna, Vineet, Chang, Howard Y, Nik-Zainal, Serena, Kanu, Nnennaya, Mcgranahan, Nicholas, Flanagan, Adrienne M, Mischel, Paul S, Jamal-Hanjani, Mariam, Swanton, Charles

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Using Multiplexed Genome Editing to Distinguish between Loss- and Gain-of-Function Variants in CARD11 von James, Richard, Meitlis, Iana, Hung, King L, Rawlings, David J., Allenspach, Eric J, Starita, Lea M

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