Focal structural variants revealed by whole genome sequencing disrupt the histone demethylase KDM4C in B-cell lymphomas von Lopez, Cristina, Schleussner, Nikolai, Bernhart, Stephan H, Kleinheinz, Kortine, Sungalee, Stephanie, Sczakiel, Henrike L, Kretzmer, Helene, Toprak, Umut H, Glaser, Selina, Wagener, Rabea, Ammerpohl, Ole, Bens, Susanne, Giefing, Maciej, Sanchez, Juan C Gonzalez, Apic, Gordana, Hubschmann, Daniel, Janz, Martin, Kreuz, Markus, Mottok, Anja, Muller, Judith M, Seufert, Julian, Hoffmann, Steve, Korbel, Jan O, Russell, Robert B, Schule, Roland, Trumper, Lorenz, Klapper, Wolfram, Radlwimmer, Bernhard, Lichter, Peter, Kuppers, Ralf, Schlesner, Matthias, Mathas, Stephan, Siebert, Reiner

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simplifyEnrichment: A Bioconductor Package for Clustering and Visualizing Functional Enrichment Results von Gu, Zuguang, Hübschmann, Daniel

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Improve consensus partitioning via a hierarchical procedure von Gu, Zuguang, Hübschmann, Daniel

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Single-cell proteo-genomic reference maps of the hematopoietic system enable the purification and massive profiling of precisely defined cell states von Triana, Sergio, Vonficht, Dominik, Jopp-Saile, Lea, Raffel, Simon, Lutz, Raphael, Leonce, Daniel, Antes, Magdalena, Hernández-Malmierca, Pablo, Ordoñez-Rueda, Diana, Ramasz, Beáta, Boch, Tobias, Jann, Johann-Christoph, Nowak, Daniel, Hofmann, Wolf-Karsten, Müller-Tidow, Carsten, Hübschmann, Daniel, Alexandrov, Theodore, Benes, Vladimir, Trumpp, Andreas, Paulsen, Malte, Velten, Lars, Haas, Simon

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Precision oncology based on omics data: The NCT Heidelberg experience von Horak, Peter, Klink, Barbara, Heining, Christoph, Gröschel, Stefan, Hutter, Barbara, Fröhlich, Martina, Uhrig, Sebastian, Hübschmann, Daniel, Schlesner, Matthias, Eils, Roland, Richter, Daniela, Pfütze, Katrin, Geörg, Christina, Meißburger, Bettina, Wolf, Stephan, Schulz, Angela, Penzel, Roland, Herpel, Esther, Kirchner, Martina, Lier, Amelie, Endris, Volker, Singer, Stephan, Schirmacher, Peter, Weichert, Wilko, Stenzinger, Albrecht, Schlenk, Richard F., Schröck, Evelin, Brors, Benedikt, von Kalle, Christof, Glimm, Hanno, Fröhling, Stefan

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Genetic Interactions and Tissue Specificity Modulate the Association of Mutations with Drug Response von Cramer, Dina, Mazur, Johanna, Espinosa, Octavio, Schlesner, Matthias, Huebschmann, Daniel, Eils, Roland, Staub, Eike

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An AI-based segmentation and analysis pipeline for high-field MR monitoring of cerebral organoids von Deininger, Luca, Jung-Klawitter, Sabine, Mikut, Ralf, Richter, Petra, Fischer, Manuel, Karimian-Jazi, Kianush, Breckwoldt, Michael O., Bendszus, Martin, Heiland, Sabine, Kleesiek, Jens, Opladen, Thomas, Kuseyri Hübschmann, Oya, Hübschmann, Daniel, Schwarz, Daniel

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Evolutionary Trajectories of IDHWT Glioblastomas Reveal a Common Path of Early Tumorigenesis Instigated Years ahead of Initial Diagnosis von Körber, Verena, Yang, Jing, Barah, Pankaj, Wu, Yonghe, Stichel, Damian, Gu, Zuguang, Fletcher, Michael Nai Chung, Jones, David, Hentschel, Bettina, Lamszus, Katrin, Tonn, Jörg Christian, Schackert, Gabriele, Sabel, Michael, Felsberg, Jörg, Zacher, Angela, Kaulich, Kerstin, Hübschmann, Daniel, Herold-Mende, Christel, von Deimling, Andreas, Weller, Michael, Radlwimmer, Bernhard, Schlesner, Matthias, Reifenberger, Guido, Höfer, Thomas, Lichter, Peter

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Integrative genomic and transcriptomic analysis of leiomyosarcoma von Chudasama, Priya, Mughal, Sadaf S., Sanders, Mathijs A., Hübschmann, Daniel, Chung, Inn, Deeg, Katharina I., Wong, Siao-Han, Rabe, Sophie, Hlevnjak, Mario, Zapatka, Marc, Ernst, Aurélie, Kleinheinz, Kortine, Schlesner, Matthias, Sieverling, Lina, Klink, Barbara, Schröck, Evelin, Hoogenboezem, Remco M., Kasper, Bernd, Heilig, Christoph E., Egerer, Gerlinde, Wolf, Stephan, von Kalle, Christof, Eils, Roland, Stenzinger, Albrecht, Weichert, Wilko, Glimm, Hanno, Gröschel, Stefan, Kopp, Hans-Georg, Omlor, Georg, Lehner, Burkhard, Bauer, Sebastian, Schimmack, Simon, Ulrich, Alexis, Mechtersheimer, Gunhild, Rippe, Karsten, Brors, Benedikt, Hutter, Barbara, Renner, Marcus, Hohenberger, Peter, Scholl, Claudia, Fröhling, Stefan

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Fibroblast Activation Protein α-Directed Imaging and Therapy of Solitary Fibrous Tumor von Hamacher, Rainer, Pabst, Kim M, Cheung, Phyllis F, Heilig, Christoph E, Hüllein, Jennifer, Liffers, Sven-Thorsten, Borchert, Sabrina, Costa, Pedro Fragoso, Schaarschmidt, Benedikt M, Kessler, Lukas, Miera, Monika A, Droste, Margret, Akbulut, Merve, Falkenhorst, Johanna, Zarrad, Fadi, Kostbade, Karina, Mavroeidi, Ilektra A, Glimm, Hanno, Umutlu, Lale, Schuler, Martin, Hübschmann, Daniel, Bauer, Sebastian, Fröhling, Stefan, Herrmann, Ken, Siveke, Jens T, Schildhaus, Hans-Ulrich, Fendler, Wolfgang P

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The landscape of chromothripsis across adult cancer types von Voronina, Natalia, Wong, John K. L., Hübschmann, Daniel, Hlevnjak, Mario, Uhrig, Sebastian, Heilig, Christoph E., Horak, Peter, Kreutzfeldt, Simon, Mock, Andreas, Stenzinger, Albrecht, Hutter, Barbara, Fröhlich, Martina, Brors, Benedikt, Jahn, Arne, Klink, Barbara, Gieldon, Laura, Sieverling, Lina, Feuerbach, Lars, Chudasama, Priya, Beck, Katja, Kroiss, Matthias, Heining, Christoph, Möhrmann, Lino, Fischer, Andrea, Schröck, Evelin, Glimm, Hanno, Zapatka, Marc, Lichter, Peter, Fröhling, Stefan, Ernst, Aurélie

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Insights into the expanding phenotypic spectrum of inherited disorders of biogenic amines von Kuseyri Hübschmann, Oya, Horvath, Gabriella, Cortès-Saladelafont, Elisenda, Yıldız, Yılmaz, Mastrangelo, Mario, Pons, Roser, Friedman, Jennifer, Mercimek-Andrews, Saadet, Wong, Suet-Na, Pearson, Toni S., Zafeiriou, Dimitrios I., Kulhánek, Jan, Kurian, Manju A., López-Laso, Eduardo, Oppebøen, Mari, Kılavuz, Sebile, Wassenberg, Tessa, Goez, Helly, Scholl-Bürgi, Sabine, Porta, Francesco, Honzík, Tomáš, Santer, René, Burlina, Alberto, Sivri, H. Serap, Leuzzi, Vincenzo, Hoffmann, Georg F., Jeltsch, Kathrin, Hübschmann, Daniel, Garbade, Sven F., García-Cazorla, Angeles, Opladen, Thomas

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Case Report: Abdominal Lymph Node Metastases of Parathyroid Carcinoma: Diagnostic Workup, Molecular Diagnosis, and Clinical Management von Lenschow, Christina, Fuss, Carmina Teresa, Kircher, Stefan, Buck, Andreas, Kickuth, Ralph, Reibetanz, Joachim, Wiegering, Armin, Stenzinger, Albrecht, Hubschmann, Daniel, Germer, Christoph Thomas, Fassnacht, Martin, Frohling, Stefan, Schlegel, Nicolas, Kroiss, Matthias

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Multi-omic and functional analysis for classification and treatment of sarcomas with FUS-TFCP2 or EWSR1-TFCP2 fusions von Schöpf, Julia, Uhrig, Sebastian, Heilig, Christoph E., Lee, Kwang-Seok, Walther, Tatjana, Carazzato, Alexander, Dobberkau, Anna Maria, Weichenhan, Dieter, Plass, Christoph, Hartmann, Mark, Diwan, Gaurav D., Carrero, Zunamys I., Ball, Claudia R., Hohl, Tobias, Kindler, Thomas, Rudolph-Hähnel, Patricia, Helm, Dominic, Schneider, Martin, Nilsson, Anna, Øra, Ingrid, Imle, Roland, Banito, Ana, Russell, Robert B., Jones, Barbara C., Lipka, Daniel B., Glimm, Hanno, Hübschmann, Daniel, Hartmann, Wolfgang, Fröhling, Stefan, Scholl, Claudia

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Mutational patterns and regulatory networks in epigenetic subgroups of meningioma von Paramasivam, Nagarajan, Hübschmann, Daniel, Toprak, Umut H, Ishaque, Naveed, Neidert, Marian, Schrimpf, Daniel, Stichel, Damian, Reuss, David, Sievers, Philipp, Reinhardt, Annekathrin, Wefers, Annika K., Jones, David T. W., Gu, Zuguang, Werner, Johannes, Uhrig, Sebastian, Wirsching, Hans-Georg, Schick, Matthias, Bewerunge-Hudler, Melanie, Beck, Katja, Brehmer, Stephanie, Urbschat, Steffi, Seiz-Rosenhagen, Marcel, Hänggi, Daniel, Herold-Mende, Christel, Ketter, Ralf, Eils, Roland, Ram, Zvi, Pfister, Stefan M., Wick, Wolfgang, Weller, Michael, Grossmann, Rachel, von Deimling, Andreas, Schlesner, Matthias, Sahm, Felix

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Gene expression-based prediction of pazopanib efficacy in sarcoma von Heilig, Christoph E., Laßmann, Andreas, Mughal, Sadaf S., Mock, Andreas, Pirmann, Sebastian, Teleanu, Veronica, Renner, Marcus, Andresen, Carolin, Köhler, Bruno C., Aybey, Bogac, Bauer, Sebastian, Siveke, Jens T., Hamacher, Rainer, Folprecht, Gunnar, Richter, Stephan, Schröck, Evelin, Brandts, Christian H., Ahrens, Marit, Hohenberger, Peter, Egerer, Gerlinde, Kindler, Thomas, Boerries, Melanie, Illert, Anna L., von Bubnoff, Nikolas, Apostolidis, Leonidas, Jost, Philipp J., Westphalen, C. Benedikt, Weichert, Wilko, Keilholz, Ulrich, Klauschen, Frederick, Beck, Katja, Winter, Ulrike, Richter, Daniela, Möhrmann, Lino, Bitzer, Michael, Schulze-Osthoff, Klaus, Brors, Benedikt, Mechtersheimer, Gunhild, Kreutzfeldt, Simon, Heining, Christoph, Lipka, Daniel B., Stenzinger, Albrecht, Schlenk, Richard F., Horak, Peter, Glimm, Hanno, Hübschmann, Daniel, Fröhling, Stefan

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Comprehensive genomic and epigenomic analysis in cancer of unknown primary guides molecularly-informed therapies despite heterogeneity von Möhrmann, Lino, Werner, Maximilian, Oleś, Małgorzata, Mock, Andreas, Uhrig, Sebastian, Jahn, Arne, Kreutzfeldt, Simon, Fröhlich, Martina, Hutter, Barbara, Paramasivam, Nagarajan, Richter, Daniela, Beck, Katja, Winter, Ulrike, Pfütze, Katrin, Heilig, Christoph E., Teleanu, Veronica, Lipka, Daniel B., Zapatka, Marc, Hanf, Dorothea, List, Catrin, Allgäuer, Michael, Penzel, Roland, Rüter, Gina, Jelas, Ivan, Hamacher, Rainer, Falkenhorst, Johanna, Wagner, Sebastian, Brandts, Christian H., Boerries, Melanie, Illert, Anna L., Metzeler, Klaus H., Westphalen, C. Benedikt, Desuki, Alexander, Kindler, Thomas, Folprecht, Gunnar, Weichert, Wilko, Brors, Benedikt, Stenzinger, Albrecht, Schröck, Evelin, Hübschmann, Daniel, Horak, Peter, Heining, Christoph, Fröhling, Stefan, Glimm, Hanno

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Defective homologous recombination DNA repair as therapeutic target in advanced chordoma von Gröschel, Stefan, Hübschmann, Daniel, Raimondi, Francesco, Horak, Peter, Warsow, Gregor, Fröhlich, Martina, Klink, Barbara, Gieldon, Laura, Hutter, Barbara, Kleinheinz, Kortine, Bonekamp, David, Marschal, Oliver, Chudasama, Priya, Mika, Jagoda, Groth, Marie, Uhrig, Sebastian, Krämer, Stephen, Heining, Christoph, Heilig, Christoph E., Richter, Daniela, Reisinger, Eva, Pfütze, Katrin, Eils, Roland, Wolf, Stephan, von Kalle, Christof, Brandts, Christian, Scholl, Claudia, Weichert, Wilko, Richter, Stephan, Bauer, Sebastian, Penzel, Roland, Schröck, Evelin, Stenzinger, Albrecht, Schlenk, Richard F., Brors, Benedikt, Russell, Robert B., Glimm, Hanno, Schlesner, Matthias, Fröhling, Stefan

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Human activation-induced deaminase lacks strong replicative strand bias or preference for cytosines in hairpin loops von Sakhtemani, Ramin, Perera, Madusha L W, Hübschmann, Daniel, Siebert, Reiner, Lawrence, Michael S, Bhagwat, Ashok S

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Make Interactive Complex Heatmaps in R von Gu, Zuguang, Hübschmann, Daniel

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