A dynamic model of proteome changes reveals new roles for transcript alteration in yeast von Lee, M Violet, Topper, Scott E, Hubler, Shane L, Hose, James, Wenger, Craig D, Coon, Joshua J, Gasch, Audrey P

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A Quantitative Map of the Liver Mitochondrial Phosphoproteome Reveals Posttranslational Control of Ketogenesis von Grimsrud, Paul A., Carson, Joshua J., Hebert, Alex S., Hubler, Shane L., Niemi, Natalie M., Bailey, Derek J., Jochem, Adam, Stapleton, Donald S., Keller, Mark P., Westphall, Michael S., Yandell, Brian S., Attie, Alan D., Coon, Joshua J., Pagliarini, David J.

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Quantitative Proteomics Reveals Factors Regulating RNA Biology as Dynamic Targets of Stress-induced SUMOylation in Arabidopsis von Miller, Marcus J., Scalf, Mark, Rytz, Thérèse C., Hubler, Shane L., Smith, Lloyd M., Vierstra, Richard D.

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Vitamin D Actions on CD4(+) T Cells in Autoimmune Disease von Hayes, Colleen Elizabeth, Hubler, Shane L, Moore, Jerott R, Barta, Lauren E, Praska, Corinne E, Nashold, Faye E

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Challenges in Peptide-Spectrum Matching: A Robust and Reproducible Statistical Framework for Removing Low-Accuracy, High-Scoring Hits von Hubler, Shane L, Kumar, Praveen, Mehta, Subina, Easterly, Caleb, Johnson, James E, Jagtap, Pratik D, Griffin, Timothy J

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1,25-Dihydroxyvitamin D3 increases the methionine cycle, CD4+ T cell DNA methylation and Helios+Foxp3+ T regulatory cells to reverse autoimmune neurodegenerative disease von Moore, Jerott R., Hubler, Shane L., Nelson, Corwin D., Nashold, Faye E., Spanier, Justin A., Hayes, Colleen E.

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Periodic patterns in distributions of peptide masses von Hubler, Shane L., Craciun, Gheorghe

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Mass distributions of linear chain polymers von Hubler, Shane L., Craciun, Gheorghe

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Characterization and Diagnostic Value of Amino Acid Side Chain Neutral Losses Following Electron-Transfer Dissociation von Xia, Qiangwei, Lee, M. Violet, Rose, Christopher M., Marsh, Alyce J., Hubler, Shane L., Wenger, Craig D., Coon, Joshua J.

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Valence Parity Renders z• -Type Ions Chemically Distinct von Hubler, Shane L, Jue, April, Keith, Jason, McAlister, Graeme C, Craciun, Gheorghe, Coon, Joshua J

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Counting chemical compositions using Ehrhart quasi-polynomials von Hubler, Shane L., Craciun, Gheorghe

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1,25-Dihydroxyvitamin D 3 increases the methionine cycle, CD4 + T cell DNA methylation and Helios + Foxp3 + T regulatory cells to reverse autoimmune neurodegenerative disease von Moore, Jerott R, Hubler, Shane L, Nelson, Corwin D, Nashold, Faye E, Spanier, Justin A, Hayes, Colleen E

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A quantitative map of the liver mitochondrial phosphoproteome reveals post-translational control of ketogenesis von Grimsrud, Paul A., Carson, Joshua J., Hebert, Alex S., Hubler, Shane L., Niemi, Natalie M., Bailey, Derek J., Jochem, Adam, Stapleton, Donald S., Keller, Mark P., Westphall, Michael S., Yandell, Brian S., Attie, Alan D., Coon, Joshua J., Pagliarini, David J.

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