Dalliance: interactive genome viewing on the web von DOWN, Thomas A, PIIPARI, Matias, HUBBARD, Tim J. P

Volltext

A Bayesian deconvolution strategy for immunoprecipitation-based DNA methylome analysis von Down, Thomas A, Rakyan, Vardhman K, Turner, Daniel J, Flicek, Paul, Li, Heng, Kulesha, Eugene, Gräf, Stefan, Johnson, Nathan, Herrero, Javier, Tomazou, Eleni M, Thorne, Natalie P, Bäckdahl, Liselotte, Herberth, Marlis, Howe, Kevin L, Jackson, David K, Miretti, Marcos M, Marioni, John C, Birney, Ewan, Hubbard, Tim J P, Durbin, Richard, Tavaré, Simon, Beck, Stephan

Volltext

Systematic evaluation of spliced alignment programs for RNA-seq data von Engström, Pär G, Steijger, Tamara, Sipos, Botond, Grant, Gregory R, Kahles, André, Rätsch, Gunnar, Goldman, Nick, Hubbard, Tim J, Harrow, Jennifer, Guigó, Roderic, Bertone, Paul

Volltext

Chromatin accessibility data sets show bias due to sequence specificity of the DNase I enzyme von Koohy, Hashem, Down, Thomas A, Hubbard, Tim J

Volltext

Data growth and its impact on the SCOP database: new developments von Andreeva, Antonina, Howorth, Dave, Chandonia, John-Marc, Brenner, Steven E, Hubbard, Tim J.P, Chothia, Cyrus, Murzin, Alexey G

Volltext

Analysis of diagnoses extracted from electronic health records in a large mental health case register von Kovalchuk, Yevgeniya, Stewart, Robert, Broadbent, Matthew, Hubbard, Tim J P, Dobson, Richard J B

Volltext

SCOP database in 2004: refinements integrate structure and sequence family data von Andreeva, Antonina, Howorth, Dave, Brenner, Steven E., Hubbard, Tim J. P., Chothia, Cyrus, Murzin, Alexey G.

Volltext

An integrated resource for genome-wide identification and analysis of human tissue-specific differentially methylated regions (tDMRs) von Rakyan, Vardhman K, Down, Thomas A, Thorne, Natalie P, Flicek, Paul, Kulesha, Eugene, Gräf, Stefan, Tomazou, Eleni M, Bäckdahl, Liselotte, Johnson, Nathan, Herberth, Marlis, Howe, Kevin L, Jackson, David K, Miretti, Marcos M, Fiegler, Heike, Marioni, John C, Birney, Ewan, Hubbard, Tim J P, Carter, Nigel P, Tavaré, Simon, Beck, Stephan

Volltext

Integrating biological data--the Distributed Annotation System von Jenkinson, Andrew M, Albrecht, Mario, Birney, Ewan, Blankenburg, Hagen, Down, Thomas, Finn, Robert D, Hermjakob, Henning, Hubbard, Tim J P, Jimenez, Rafael C, Jones, Philip, Kähäri, Andreas, Kulesha, Eugene, Macías, José R, Reeves, Gabrielle A, Prlić, Andreas

Volltext

Characterisation of mental health conditions in social media using Informed Deep Learning von Gkotsis, George, Oellrich, Anika, Velupillai, Sumithra, Liakata, Maria, Hubbard, Tim J. P., Dobson, Richard J. B., Dutta, Rina

Volltext

Large-scale discovery of promoter motifs in Drosophila melanogaster von Down, Thomas A, Bergman, Casey M, Su, Jing, Hubbard, Tim J P

Volltext

Combining RT-PCR-seq and RNA-seq to catalog all genic elements encoded in the human genome von Howald, Cédric, Tanzer, Andrea, Chrast, Jacqueline, Kokocinski, Felix, Derrien, Thomas, Walters, Nathalie, Gonzalez, Jose M, Frankish, Adam, Aken, Bronwen L, Hourlier, Thibaut, Vogel, Jan-Hinnerk, White, Simon, Searle, Stephen, Harrow, Jennifer, Hubbard, Tim J, Guigó, Roderic, Reymond, Alexandre

Volltext

Integrating sequence and structural biology with DAS von Prlić, Andreas, Down, Thomas A, Kulesha, Eugene, Finn, Robert D, Kähäri, Andreas, Hubbard, Tim J P

Volltext

Computational detection and location of transcription start sites in mammalian genomic DNA von Down, Thomas A, Hubbard, Tim J P

Volltext

The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression von Derrien, Thomas, Johnson, Rory, Bussotti, Giovanni, Tanzer, Andrea, Djebali, Sarah, Tilgner, Hagen, Guernec, Gregory, Martin, David, Merkel, Angelika, Knowles, David G, Lagarde, Julien, Veeravalli, Lavanya, Ruan, Xiaoan, Ruan, Yijun, Lassmann, Timo, Carninci, Piero, Brown, James B, Lipovich, Leonard, Gonzalez, Jose M, Thomas, Mark, Davis, Carrie A, Shiekhattar, Ramin, Gingeras, Thomas R, Hubbard, Tim J, Notredame, Cedric, Harrow, Jennifer, Guigó, Roderic

Volltext

SISYPHUS--structural alignments for proteins with non-trivial relationships von Andreeva, Antonina, Prlić, Andreas, Hubbard, Tim J.P, Murzin, Alexey G

Volltext

Mining Social Media Data to Study the Consequences of Dementia Diagnosis on Caregivers and Relatives von Gkotsis, George, Mueller, Christoph, Dobson, Richard J.B., Hubbard, Tim J.P., Dutta, Rina

Volltext

Assessing Sequence Comparison Methods with Reliable Structurally Identified Distant Evolutionary Relationships von Brenner, Steven E., Chothia, Cyrus, Tim J. P. Hubbard

Volltext

iMotifs: an integrated sequence motif visualization and analysis environment von Piipari, Matias, Down, Thomas A., Saini, Harpreet, Enright, Anton, Hubbard, Tim J.P.

Volltext

The Protein Feature Ontology: a tool for the unification of protein feature annotations von Reeves, Gabrielle A., Eilbeck, Karen, Magrane, Michele, O'Donovan, Claire, Montecchi-Palazzi, Luisa, Harris, Midori A., Orchard, Sandra, Jimenez, Rafael C., Prlic, Andreas, Hubbard, Tim J. P., Hermjakob, Henning, Thornton, Janet M.

Volltext