H3K4 methylation at active genes mitigates transcription-replication conflicts during replication stress von Chong, Shin Yen, Cutler, Sam, Lin, Jing-Jer, Tsai, Cheng-Hung, Tsai, Huai-Kuang, Biggins, Sue, Tsukiyama, Toshio, Lo, Yi-Chen, Kao, Cheng-Fu

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Inferring the transcriptional regulatory mechanism of signal‐dependent gene expression via an integrative computational approach von Chiang, Sufeng, Shinohara, Hisaaki, Huang, Jia‐Hsin, Tsai, Huai‐Kuang, Okada, Mariko

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Genome-wide identification of associations between enhancer and alternative splicing in human and mouse von Shiau, Cheng-Kai, Huang, Jia-Hsin, Liu, Yu-Ting, Tsai, Huai-Kuang

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CATANA: a tool for generating comprehensive annotations of alternative transcript events von Shiau, Cheng-Kai, Huang, Jia-Hsin, Tsai, Huai-Kuang

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Transgenic refractory Aedes aegypti lines are resistant to multiple serotypes of dengue virus von Liu, Wei-Liang, Hsu, Chia-Wei, Chan, Shih-Peng, Yen, Pei-Shi, Su, Matthew P., Li, Jian-Chiuan, Li, Hsing-Han, Cheng, Lie, Tang, Cheng-Kang, Ko, Shih-Hsun, Tsai, Huai-Kuang, Tsai, Zing Tsung-Yeh, Akbari, Omar S., Failloux, Anna-Bella, Chen, Chun-Hong

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Comparative genomic analyses highlight the contribution of pseudogenized protein-coding genes to human lincRNAs von Liu, Wan-Hsin, Tsai, Zing Tsung-Yeh, Tsai, Huai-Kuang

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Genome-wide analysis of enhancer RNA in gene regulation across 12 mouse tissues von Cheng, Jen-Hao, Pan, David Zhi-Chao, Tsai, Zing Tsung-Yeh, Tsai, Huai-Kuang

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Contribution of Sequence Motif, Chromatin State, and DNA Structure Features to Predictive Models of Transcription Factor Binding in Yeast von Tsai, Zing Tsung-Yeh, Shiu, Shin-Han, Tsai, Huai-Kuang

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Author Correction: Transgenic refractory Aedes aegypti lines are resistant to multiple serotypes of dengue virus von Liu, Wei-Liang, Hsu, Chia-Wei, Chan, Shih-Peng, Yen, Pei-Shi, Su, Matthew P., Li, Jian-Chiuan, Li, Hsing-Han, Cheng, Lie, Tang, Cheng-Kang, Ko, Shih-Hsun, Tsai, Huai-Kuang, Tsai, Zing Tsung-Yeh, Akbari, Omar S., Failloux, Anna-Bella, Chen, Chun-Hong

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Connecting MHC-I-binding motifs with HLA alleles via deep learning von Lee, Ko-Han, Chang, Yu-Chuan, Chen, Ting-Fu, Juan, Hsueh-Fen, Tsai, Huai-Kuang, Chen, Chien-Yu

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The CrdRS two‐component system in Helicobacter pylori responds to nitrosative stress von Hung, Chiu‐Lien, Cheng, Hsin‐Hung, Hsieh, Wan‐Chen, Tsai, Zing Tsung‐Yeh, Tsai, Huai‐Kuang, Chu, Chia‐Han, Hsieh, Wen‐Ping, Chen, Yi‐Fan, Tsou, Yu, Lai, Chih‐Ho, Wang, Wen‐Ching

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Differential Hsp90-dependent gene expression is strain-specific and common among yeast strains von Hung, Po-Hsiang, Liao, Chia-Wei, Ko, Fu-Hsuan, Tsai, Huai-Kuang, Leu, Jun-Yi

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Borders of Cis -Regulatory DNA Sequences Preferentially Harbor the Divergent Transcription Factor Binding Motifs in the Human Genome von Huang, Jia-Hsin, Kwan, Ryan Shun-Yuen, Tsai, Zing Tsung-Yeh, Lin, Tzu-Chieh, Tsai, Huai-Kuang

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Predicting splicing patterns from the transcription factor binding sites in the promoter with deep learning von Lin, Tzu-Chieh, Tsai, Cheng-Hung, Shiau, Cheng-Kai, Huang, Jia-Hsin, Tsai, Huai-Kuang

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Statistical methods for identifying yeast cell cycle transcription factors von Tsai, H.K, Lu, H.H.S, Li, W.H

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NK cell receptor and ligand composition influences the clearance of SARS-CoV-2 von Hsieh, Wan-Chen, Lai, En-Yu, Liu, Yu-Ting, Wang, Yi-Fu, Tzeng, Yi-Shiuan, Cui, Lu, Lai, Yun-Ju, Huang, Hsiang-Chi, Huang, Jia-Hsin, Ni, Hung-Chih, Tsai, Dong-Yan, Liang, Jian-Jong, Liao, Chun-Che, Lu, Ya-Ting, Jiang, Laurence, Liu, Ming-Tsan, Wang, Jann-Tay, Chang, Sui-Yuan, Chen, Chung-Yu, Tsai, Hsing-Chen, Chang, Yao-Ming, Wernig, Gerlinde, Li, Chia-Wei, Lin, Kuo-I, Lin, Yi-Ling, Tsai, Huai-Kuang, Huang, Yen-Tsung, Chen, Shih-Yu

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Identification and comparative analysis of long non-coding RNAs in the brain of fire ant queens in two different reproductive states von Tsai, Cheng-Hung, Lin, Tzu-Chieh, Chang, Yi-Hsien, Tsai, Huai-Kuang, Huang, Jia-Hsin

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Setting boundaries for genome-wide heterochromatic DNA deletions through flanking inverted repeats in Tetrahymena thermophila von Lin, Chih-Yi Gabriela, Chao, Ju-Lan, Tsai, Huai-Kuang, Chalker, Douglas, Yao, Meng-Chao

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Evolution of cis-regulatory elements in yeast de novo and duplicated new genes von Tsai, Zing Tsung-Yeh, Tsai, Huai-Kuang, Cheng, Jen-Hao, Lin, Chih-Hsu, Tsai, Yuan-Fan, Wang, Daryi

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pubmedKB: an interactive web server for exploring biomedical entity relations in the biomedical literature von Li, Peng-Hsuan, Chen, Ting-Fu, Yu, Jheng-Ying, Shih, Shang-Hung, Su, Chan-Hung, Lin, Yin-Hung, Tsai, Huai-Kuang, Juan, Hsueh-Fen, Chen, Chien-Yu, Huang, Jia-Hsin

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