Issues and current standards of controls in microbiome research von Hornung, Bastian V H, Zwittink, Romy D, Kuijper, Ed J

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Plasmid-mediated metronidazole resistance in Clostridioides difficile von Boekhoud, Ilse M., Hornung, Bastian V. H., Sevilla, Eloisa, Harmanus, Céline, Bos-Sanders, Ingrid M. J. G., Terveer, Elisabeth M., Bolea, Rosa, Corver, Jeroen, Kuijper, Ed J., Smits, Wiep Klaas

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Deciphering the trophic interaction between Akkermansia muciniphila and the butyrogenic gut commensal Anaerostipes caccae using a metatranscriptomic approach von Chia, Loo Wee, Hornung, Bastian V. H., Aalvink, Steven, Schaap, Peter J., de Vos, Willem M., Knol, Jan, Belzer, Clara

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Unraveling the impact of AXIN1 mutations on HCC development: Insights from CRISPR/Cas9 repaired AXIN1-mutant liver cancer cell lines von Zhang, Ruyi, Li, Shanshan, Schippers, Kelly, Eimers, Boaz, Niu, Jiahui, Hornung, Bastian V H, van den Hout, Mirjam C G N, van Ijcken, Wilfred F J, Peppelenbosch, Maikel P, Smits, Ron

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Mechanistic Insights in the Success of Fecal Microbiota Transplants for the Treatment of Clostridium difficile Infections von Baktash, Amoe, Terveer, Elisabeth M, Zwittink, Romy D, Hornung, Bastian V H, Corver, Jeroen, Kuijper, Ed J, Smits, Wiep Klaas

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The reductive glycine pathway allows autotrophic growth of Desulfovibrio desulfuricans von Sánchez-Andrea, Irene, Guedes, Iame Alves, Hornung, Bastian, Boeren, Sjef, Lawson, Christopher E., Sousa, Diana Z., Bar-Even, Arren, Claassens, Nico J., Stams, Alfons J. M.

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Propionibacterium ruminifibrarum sp. nov., isolated from cow rumen fibrous content von Vaidya, Jueeli D, Hornung, Bastian V H, Smidt, Hauke, Edwards, Joan E, Plugge, Caroline M

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An objective criterion to evaluate sequence-similarity networks helps in dividing the protein family sequence space von Hornung, Bastian Volker Helmut, Terrapon, Nicolas

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Screening for Clostridioides difficile colonization at admission to the hospital: a multi-centre study von Crobach, Monique J.T., Hornung, Bastian V.H., Verduin, Cees, Vos, Margreet C., Hopman, Joost, Kumar, Nitin, Harmanus, Celine, Sanders, Ingrid, Terveer, Elisabeth M., Stares, Mark D., Lawley, Trevor D., Kuijper, Ed J.

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A subfamily classification to choreograph the diverse activities within glycoside hydrolase family 31 von Arumapperuma, Thimali, Li, Jinling, Hornung, Bastian, Soler, Niccolay Madiedo, Goddard-Borger, Ethan D., Terrapon, Nicolas, Williams, Spencer J.

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Carriage of three plasmids in a single human clinical isolate of Clostridioides difficile von Roseboom, Anna M., Ducarmon, Quinten R., Hornung, Bastian V.H., Harmanus, Céline, Crobach, Monique J.T., Kuijper, Ed J., Vossen, Rolf H.A.M., Kloet, Susan L., Smits, Wiep Klaas

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Metatranscriptomic analysis indicates prebiotic effect of isomalto/malto-polysaccharides on human colonic microbiota in-vitro von Borewicz, Klaudyna, Hornung, Bastian, Gu, Fangjie, van der Zaal, Pieter H., Schols, Henk A., Schaap, Peter J., Smidt, Hauke

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A benzene-degrading nitrate-reducing microbial consortium displays aerobic and anaerobic benzene degradation pathways von Atashgahi, Siavash, Hornung, Bastian, van der Waals, Marcelle J., da Rocha, Ulisses Nunes, Hugenholtz, Floor, Nijsse, Bart, Molenaar, Douwe, van Spanning, Rob, Stams, Alfons Johannes Maria, Gerritse, Jan, Smidt, Hauke

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Split Pool Ligation-based Single-cell Transcriptome sequencing (SPLiT-seq) data processing pipeline comparison von Kuijpers, Lucas, Hornung, Bastian, van den Hout-van Vroonhoven, Mirjam C G N, van IJcken, Wilfred F J, Grosveld, Frank, Mulugeta, Eskeatnaf

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An in silico survey of Clostridioides difficile extrachromosomal elements von Hornung, Bastian V H, Kuijper, Ed J, Smits, Wiep Klaas

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Comparison of Single Cell Transcriptome Sequencing Methods: Of Mice and Men von Hornung, Bastian V H, Azmani, Zakia, den Dekker, Alexander T, Oole, Edwin, Ozgur, Zeliha, Brouwer, Rutger W W, van den Hout, Mirjam C G N, van IJcken, Wilfred F J

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Genomic and functional analysis of Romboutsia ilealis CRIBT reveals adaptation to the small intestine von Gerritsen, Jacoline, Hornung, Bastian, Renckens, Bernadette, Sacha AFT VanHijum, Vitor AP Martins dos Santos, Rijkers, Ger T, Schaap, Peter J, de Vos, Willem M, Smidt, Hauke

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Acetate Degradation at Low pH by the Moderately Acidophilic Sulfate Reducer Acididesulfobacillus acetoxydans gen. nov. sp. nov von Sánchez-Andrea, Irene, van der Graaf, Charlotte M, Hornung, Bastian, Bale, Nicole J, Jarzembowska, Monika, Sousa, Diana Z, Rijpstra, W Irene C, Sinninghe Damsté, Jaap S, Stams, Alfons J M

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Studying microbial functionality within the gut ecosystem by systems biology von Hornung, Bastian, Martins Dos Santos, Vitor A P, Smidt, Hauke, Schaap, Peter J

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Response to: ‘Circulating microbiome in blood of different circulatory compartments’ by Schierwagen et al von Hornung, Bastian Volker Helmut, Zwittink, Romy Danielle, Ducarmon, Quinten Raymond, Kuijper, Ed J

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