IDseq—An open source cloud-based pipeline and analysis service for metagenomic pathogen detection and monitoring von Kalantar, Katrina L, Carvalho, Tiago, de Bourcy, Charles F A, Dimitrov, Boris, Dingle, Greg, Egger, Rebecca, Han, Julie, Holmes, Olivia B, Juan, Yun-Fang, King, Ryan, Kislyuk, Andrey, Lin, Michael F, Mariano, Maria, Morse, Todd, Reynoso, Lucia V, Cruz, David Rissato, Sheu, Jonathan, Tang, Jennifer, Wang, James, Zhang, Mark A, Zhong, Emily, Ahyong, Vida, Lay, Sreyngim, Chea, Sophana, Bohl, Jennifer A, Manning, Jessica E, Tato, Cristina M, DeRisi, Joseph L

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Supporting data for "IDseq- An Open Source Cloud-based Pipeline and Analysis Service for Metagenomic Pathogen Detection and Monitoring" von Katrina, Kalantar L, Tiago, Carvalho, Charles, DeBourcy FA, Dmitrov Boris, Dingle Greg, Egger Rebecca, Julie, Han, Holmes B Olivia, Yunfang, Juan, Ryan, King, Kislyuk Andrey, Michael, Lin F, Maria, Mariano, Morse Todd, Reynoso V Lucia, David, Cruz Rissato, Jonathan, Sheu, Jennifer, Tang, James, Wang, Mark, Zhang A, Emily, Zhong, Vida, Ahyong, Lay Sreyngim, Chea Sophana, Bohl A Jennifer, Jessica, Manning E, Cristina, Tato M, Joseph, DeRisi L

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Combined Genetic Inactivation of β2-Microglobulin and CD58 Reveals Frequent Escape from Immune Recognition in Diffuse Large B Cell Lymphoma von Challa-Malladi, Madhavi, Lieu, Yen K., Califano, Olivia, Holmes, Antony B., Bhagat, Govind, Murty, Vundavalli V., Dominguez-Sola, David, Pasqualucci, Laura, Dalla-Favera, Riccardo

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Assessing transmissibility of SARS-CoV-2 lineage B.1.1.7 in England von Volz, Erik, Mishra, Swapnil, Chand, Meera, Barrett, Jeffrey C., Johnson, Robert, Geidelberg, Lily, Hinsley, Wes R., Laydon, Daniel J., Dabrera, Gavin, O’Toole, Áine, Amato, Robert, Ragonnet-Cronin, Manon, Harrison, Ian, Jackson, Ben, Ariani, Cristina V., Boyd, Olivia, Loman, Nicholas J., McCrone, John T., Gonçalves, Sónia, Jorgensen, David, Myers, Richard, Hill, Verity, Jackson, David K., Gaythorpe, Katy, Groves, Natalie, Sillitoe, John, Kwiatkowski, Dominic P., Flaxman, Seth, Ratmann, Oliver, Bhatt, Samir, Hopkins, Susan, Gandy, Axel, Rambaut, Andrew, Ferguson, Neil M.

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Combined Genetic Inactivation of beta 2-Microglobulin and CD58 Reveals Frequent Escape from Immune Recognition in Diffuse Large B Cell Lymphoma von Challa-Malladi, Madhavi, Lieu, Yen K, Califano, Olivia, Holmes, Antony B, Bhagat, Govind, Murty, Vundavalli V, Dominguez-Sola, David, Pasqualucci, Laura, Dalla-Favera, Riccardo

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Exploring Gut Microbiota Alterations with Trimethoprim-Sulfamethoxazole and Dexamethasone in a Humanized Microbiome Mouse Model von Green, George B H, Cox-Holmes, Alexis N, Backan, Olivia, Valbak, Olivia, Potier, Anna Claire E, Chen, Dongquan, Morrow, Casey D, Willey, Christopher D, McFarland, Braden C

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Successful use of azithromycin for Escherichia coli–associated renal allograft malakoplakia: a report of two cases von Kinsella, Paul M., Smibert, Olivia C., Whitlam, John B., Steven, Mark, Masia, Ricard, Gandhi, Ronak G., Kotton, Camille N., Holmes, Natasha E.

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Maternal ingestion of cannabidiol (CBD) in mice leads to sex-dependent changes in memory, anxiety, and metabolism in the adult offspring, and causes a decrease in survival to weani... von Compagno, Martina Krakora, Silver, Claudia Rose, Cox-Holmes, Alexis, Basso, Kari B., Bishop, Caroline, Bernstein, Amber Michal, Carley, Aidan, Cazorla, Joshua, Claydon, Jenna, Crane, Ashleigh, Crespi, Chloe, Curley, Emma, Dolezel, Tyla, Franck, Ezabelle, Heiden, Katie, Huffstetler, Carley Marie, Loeven, Ashley M., May, Camilla Ann, Maykut, Nicholas, Narvarez, Alejandro, Pacheco, Franklin A., Turner, Olivia, Fadool, Debra Ann

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Recessive nephrocerebellar syndrome on the Galloway-Mowat syndrome spectrum is caused by homozygous protein-truncating mutations of WDR73 von Jinks, Robert N, Puffenberger, Erik G, Baple, Emma, Harding, Brian, Crino, Peter, Fogo, Agnes B, Wenger, Olivia, Xin, Baozhong, Koehler, Alanna E, McGlincy, Madeleine H, Provencher, Margaret M, Smith, Jeffrey D, Tran, Linh, Al Turki, Saeed, Chioza, Barry A, Cross, Harold, Harlalka, Gaurav V, Hurles, Matthew E, Maroofian, Reza, Heaps, Adam D, Morton, Mary C, Stempak, Lisa, Hildebrandt, Friedhelm, Sadowski, Carolin E, Zaritsky, Joshua, Campellone, Kenneth, Morton, D Holmes, Wang, Heng, Crosby, Andrew, Strauss, Kevin A

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SARS-CoV-2 infection results in immune responses in the respiratory tract and peripheral blood that suggest mechanisms of disease severity von Zhang, Wuji, Chua, Brendon Y., Selva, Kevin J., Kedzierski, Lukasz, Ashhurst, Thomas M., Haycroft, Ebene R., Shoffner-Beck, Suzanne K., Hensen, Luca, Boyd, David F., James, Fiona, Mouhtouris, Effie, Kwong, Jason C., Chua, Kyra Y. L., Drewett, George, Copaescu, Ana, Dobson, Julie E., Rowntree, Louise C., Habel, Jennifer R., Allen, Lilith F., Koay, Hui-Fern, Neil, Jessica A., Gartner, Matthew J., Lee, Christina Y., Andersson, Patiyan, Khan, Sadid F., Blakeway, Luke, Wisniewski, Jessica, McMahon, James H., Vine, Erica E., Cunningham, Anthony L., Audsley, Jennifer, Thevarajan, Irani, Seemann, Torsten, Sherry, Norelle L., Amanat, Fatima, Krammer, Florian, Londrigan, Sarah L., Wakim, Linda M., King, Nicholas J. C., Godfrey, Dale I., Mackay, Laura K., Thomas, Paul G., Nicholson, Suellen, Arnold, Kelly B., Chung, Amy W., Holmes, Natasha E., Smibert, Olivia C., Trubiano, Jason A., Gordon, Claire L., Nguyen, Thi H. O., Kedzierska, Katherine

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HIV treatment as prevention: models, data, and questions--towards evidence-based decision-making von Group, Prevention EditorialWriting

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Assessment of Severe Extremity Wound Bioburden at the Time of Definitive Wound Closure or Coverage: Correlation With Subsequent Postclosure Deep Wound Infection (Bioburden Study) von Bosse, Michael J, Murray, Clinton K, Carlini, Anthony R, Firoozabadi, Reza, Manson, Theodore, Scharfstein, Daniel O, Wenke, Joseph C, Zadnik, Mary, Castillo, Renan C

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[F1–02–02]: DISCOVERY AND VALIDATION OF MULTIMODAL BIOMARKER SIGNATURES RELATING TO ALZHEIMER'S DISEASE PATHOLOGY AND PROGRESSION von Westwood, Sarah, Hye, Abdul, Lleó, Alberto, Nevado‐Holgado, Alejo J., Baird, Alison L., Wallin, Anders, Leslie, Anoushka, Jimenez, Beatriz, Liu, Benjamine Young, Legido‐Quigley, Cristina, Dima, Danai, Ruvolo, David, Holmes, Elaine, D'Hondt, Ellie, Westman, Eric, Barkhof, Frederik, Frisoni, Giovanni B., Zetterberg, Henrik, Bos, Isabelle, Pearce, Jake, Streffer, Johannes, Molinuevo, José Luis, Popp, Julius, Bertram, Lars, Whiley, Luke, Maslen, Lynn, Gomez‐Romero, Maria, David, Mark, Lewis, Matthew, Kurbatova, Natalja, Ashton, Nicholas J., Voyle, Nicola, Kowalczyk, Olivia, Martinez‐Lage, Pablo, Proitsi, Petroula, Scheltens, Philip, Visser, Pieter Jelle, Dobson, Richard JB, Vandenberghe, Rik, Engelborghs, Sebastiaan, Vos, Stephanie J.B., Snowden, Stuart G., Athersuch, Toby, Ashby, Tom, Kimhofer, Torben, Verachtert, Wilfried, Lovestone, Simon

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Recessive nephrocerebellar syndrome on the Galloway-Mowat syndrome spectrum is caused by homozygous protein-truncating mutations of WDR73 von Jinks, Robert N, Puffenberger, Erik G, Baple, Emma, Harding, Brian, Crino, Peter, Fogo, Agnes B, Wenger, Olivia, Xin, Baozhong, Koehler, Alanna E, McGlincy, Madeleine H, Provencher, Margaret M, Smith, Jeffrey D, Tran, Linh, Al Turki, Saeed, Chioza, Barry A, Cross, Harold, Harlalka, Gaurav V, Hurles, Matthew E, Maroofian, Reza, Heaps, Adam D, Morton, Mary C, Stempak, Lisa, Hildebrandt, Friedhelm, Sadowski, Carolin E, Zaritsky, Joshua, Campellone, Kenneth, Morton, D. Holmes, Wang, Heng, Crosby, Andrew, Strauss, Kevin A

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DISCOVERY AND VALIDATION OF MULTIMODAL BIOMARKER SIGNATURES RELATING TO ALZHEIMER'S DISEASE PATHOLOGY AND PROGRESSION von Westwood, Sarah, Hye, Abdul, Lleó, Alberto, Nevado-Holgado, Alejo J., Baird, Alison L., Wallin, Anders, Leslie, Anoushka, Jimenez, Beatriz, Liu, Benjamine Young, Legido-Quigley, Cristina, Dima, Danai, Ruvolo, David, Holmes, Elaine, D'Hondt, Ellie, Westman, Eric, Barkhof, Frederik, Frisoni, Giovanni B., Zetterberg, Henrik, Bos, Isabelle, Pearce, Jake, Streffer, Johannes, Molinuevo, José Luis, Popp, Julius, Bertram, Lars, Whiley, Luke, Maslen, Lynn, Gomez-Romero, Maria, David, Mark, Lewis, Matthew, Kurbatova, Natalja, Ashton, Nicholas J., Voyle, Nicola, Kowalczyk, Olivia, Martinez-Lage, Pablo, Proitsi, Petroula, Scheltens, Philip, Visser, Pieter Jelle, Dobson, Richard JB, Vandenberghe, Rik, Engelborghs, Sebastiaan, Vos, Stephanie J.B., Snowden, Stuart G., Athersuch, Toby, Ashby, Tom, Kimhofer, Torben, Verachtert, Wilfried, Lovestone, Simon

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P3-207: Angiotensin-converting enzyme and the risk of late-onset Alzheimer's disease von Brown, Kristelle, Belbin, Olivia, Kalsheker, Noor, Craig, David, McGuinness, B, Passmore, Peter, Heun, Reinhard, Koelsch, Heike, Kehoe, Patrick, Mann, David, Warden, Donald, Beaumont, Helen, Smith, David, Holmes, Clive, Morgan, Kevin

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P3-244: Insulin degrading enzyme and the risk of late-onset Alzheimer's disease: A large replication study in a European population von Morgan, Kevin, Carrasquillo, Minerva, Belbin, Olivia, Brown, Kristelle, Kalsheker, Noor, Craig, David, McGuinness, B, Passmore, Peter, Heun, Reinhard, Koelsch, Heike, Kehoe, Patrick, Mann, David, Warden, Donald, Beaumont, Helen, Smith, David, Holmes, Clive, Younkin, Steven

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Detailed Characterization of a Purified Type 4 Phosphodiesterase, HSPDE4B2B: Differentiation of High- and Low-Affinity (R)-Rolipram Binding von Rocque, Warren J., Holmes, William D., Patel, Indravadan R., Dougherty, Robert W., Ittoop, Olivia, Overton, Laurie, Hoffman, Christine R., Wisely, G.Bruce, Willard, Derril H., Luther, Michael A.

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SARS-CoV-2 infection results in immune responses in the respiratory tract and peripheral blood that suggest mechanisms of disease severity von Zhang, Wuji, Chua, Brendon Y, Selva, Kevin J, Kedzierski, Lukasz, Ashhurst, Thomas M, Haycroft, Ebene R, Shoffner-Beck, Suzanne K, Hensen, Luca, Boyd, David F, James, Fiona, Mouhtouris, Effie, Kwong, Jason C, Chua, Kyra Y. L, Drewett, George, Copaescu, Ana, Dobson, Julie E, Rowntree, Louise C, Habel, Jennifer R, Allen, Lilith F, Koay, Hui-Fern, Neil, Jessica A, Gartner, Matthew J, Lee, Christina Y, Andersson, Patiyan, Khan, Sadid F, Blakeway, Luke, Wisniewski, Jessica, McMahon, James H, Vine, Erica E, Cunningham, Anthony L, Audsley, Jennifer, Thevarajan, Irani, Seemann, Torsten, Sherry, Norelle L, Amanat, Fatima, Krammer, Florian, Londrigan, Sarah L, Wakim, Linda M, King, Nicholas J. C, Godfrey, Dale I, Mackay, Laura K, Thomas, Paul G, Nicholson, Suellen, Arnold, Kelly B, Chung, Amy W, Holmes, Natasha E, Smibert, Olivia C, Trubiano, Jason A, Gordon, Claire L, Nguyen, Thi H. O, Kedzierska, Katherine

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Molecular evolutionary trends and feeding ecology diversification in the Hemiptera, anchored by the milkweed bug genome von Panfilio, Kristen A, Vargas Jentzsch, Iris M, Benoit, Joshua B, Erezyilmaz, Deniz, Suzuki, Yuichiro, Colella, Stefano, Robertson, Hugh M, Poelchau, Monica F, Waterhouse, Robert M, Ioannidis, Panagiotis, Weirauch, Matthew T, Hughes, Daniel ST, Murali, Shwetha C, Werren, John H, Jacobs, Chris GC, Duncan, Elizabeth J, Armisén, David, Vreede, Barbara MI, Baa-Puyoulet, Patrice, Berger, Chloé S, Chang, Chun-Che, Chao, Hsu, Chen, Mei-Ju M, Chen, Yen-Ta, Childers, Christopher P, Chipman, Ariel D, Cridge, Andrew G, Crumière, Antonin JJ, Dearden, Peter K, Didion, Elise M, Dinh, Huyen, Doddapaneni, Harsha Vardhan, Dolan, Amanda, Dugan, Shannon, Extavour, Cassandra G, Febvay, Gérard, Friedrich, Markus, Ginzburg, Neta, Han, Yi, Heger, Peter, Holmes, Christopher J, Horn, Thorsten, Hsiao, Yi-Min, Jennings, Emily C, Johnston, J Spencer, Jones, Tamsin E, Jones, Jeffery W, Khila, Abderrahman, Koelzer, Stefan, Kovacova, Viera, Leask, Megan, Lee, Sandra L, Lee, Chien-Yueh, Lovegrove, Mackenzie R, Lu, Hsiao-Ling, Lu, Yong, Moore, Patricia J, Munoz-Torres, Monica C, Muzny, Donna M, Palli, Subba R, Parisot, Nicolas, Pick, Leslie, Porter, Megan L, Qu, Jiaxin, Refki, Peter N, Richter, Rose, Rivera-Pomar, Rolando, Rosendale, Andrew J, Roth, Siegfried, Sachs, Lena, Santos, M Emília, Seibert, Jan, Sghaier, Essia, Shukla, Jayendra N, Stancliffe, Richard J, Tidswell, Olivia, Traverso, Lucila, van der Zee, Maurijn, Viala, Séverine, Worley, Kim C, Zdobnov, Evgeny M, Gibbs, Richard A, Richards, Stephen

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