Apollo: Democratizing genome annotation von Dunn, Nathan A, Unni, Deepak R, Diesh, Colin, Munoz-Torres, Monica, Harris, Nomi L, Yao, Eric, Rasche, Helena, Holmes, Ian H, Elsik, Christine G, Lewis, Suzanna E

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Solving the master equation for Indels von Holmes, Ian H

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JBrowse 2: a modular genome browser with views of synteny and structural variation von Diesh, Colin, Stevens, Garrett J, Xie, Peter, De Jesus Martinez, Teresa, Hershberg, Elliot A, Leung, Angel, Guo, Emma, Dider, Shihab, Zhang, Junjun, Bridge, Caroline, Hogue, Gregory, Duncan, Andrew, Morgan, Matthew, Flores, Tia, Bimber, Benjamin N, Haw, Robin, Cain, Scott, Buels, Robert M, Stein, Lincoln D, Holmes, Ian H

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JBrowse: a next-generation genome browser von Skinner, Mitchell E, Uzilov, Andrew V, Stein, Lincoln D, Mungall, Christopher J, Holmes, Ian H

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Web Apollo: a web-based genomic annotation editing platform von Lee, Eduardo, Helt, Gregg A, Reese, Justin T, Munoz-Torres, Monica C, Childers, Chris P, Buels, Robert M, Stein, Lincoln, Holmes, Ian H, Elsik, Christine G, Lewis, Suzanna E

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Historian: accurate reconstruction of ancestral sequences and evolutionary rates von Holmes, Ian H

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JBrowse: a dynamic web platform for genome visualization and analysis von Buels, Robert, Yao, Eric, Diesh, Colin M, Hayes, Richard D, Munoz-Torres, Monica, Helt, Gregg, Goodstein, David M, Elsik, Christine G, Lewis, Suzanna E, Stein, Lincoln, Holmes, Ian H

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Setting Up the JBrowse Genome Browser von Skinner, Mitchell E., Holmes, Ian H.

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BioMake: a GNU make-compatible utility for declarative workflow management von Holmes, Ian H, Mungall, Christopher J

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JBrowse Jupyter: a Python interface to JBrowse 2 von De Jesus Martinez, Teresa, Hershberg, Elliot A, Guo, Emma, Stevens, Garrett J, Diesh, Colin, Xie, Peter, Bridge, Caroline, Cain, Scott, Haw, Robin, Buels, Robert M, Stein, Lincoln D, Holmes, Ian H

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Implementing a US Carbon Tax: Challenges and Debates von Parry, Ian, Morris, Adele, Williams III, Roberton C

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Environmental Tax Reform: Principles from Theory and Practice to Date (PDF Download) von Norregaard, John, Parry, Ian W.H

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RNAcentral: A vision for an international database of RNA sequences von Bateman, Alex, Agrawal, Shipra, Birney, Ewan, Bruford, Elspeth A, Bujnicki, Janusz M, Cochrane, Guy, Cole, James R, Dinger, Marcel E, Enright, Anton J, Gardner, Paul P, Gautheret, Daniel, Griffiths-Jones, Sam, Harrow, Jen, Herrero, Javier, Holmes, Ian H, Huang, Hsien-Da, Kelly, Krystyna A, Kersey, Paul, Kozomara, Ana, Lowe, Todd M, Marz, Manja, Moxon, Simon, Pruitt, Kim D, Samuelsson, Tore, Stadler, Peter F, Vilella, Albert J, Vogel, Jan-Hinnerk, Williams, Kelly P, Wright, Mathew W, Zwieb, Christian

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Tools for simulating evolution of aligned genomic regions with integrated parameter estimation von Varadarajan, Avinash, Bradley, Robert K, Holmes, Ian H

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WTFgenes: What's The Function of these genes? Static sites for model-based gene set analysis [version 1; peer review: 2 approved with reservations] von Mungall, Christopher J, Holmes, Ian H

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Getting energy prices right: from principle to practice. von Parry, Ian, Parry, Ian, Heine, Dirk, Lis, Eliza, Li, Shanjun

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Fiscal policy to mitigate climate change: a guide for policymakers. von Mooij, Ruud A. de, Keen, Michael, Parry, Ian W.H

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Haloalkane Dehalogenases:  Structure of a Rhodococcus Enzyme von Newman, Janet, Peat, Thomas S, Richard, Ruth, Kan, Lynn, Swanson, Paul E, Affholter, Joseph A, Holmes, Ian H, Schindler, John F, Unkefer, Clifford J, Terwilliger, Thomas C

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Colorstock, SScolor, Ratón: RNA alignment visualization tools von Bendaña, Yuri R., Holmes, Ian H.

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Reforming the Tax System to Promote Environmental Objectives: An Application to Mauritius von Parry, Ian W.H

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