emClarity: software for high-resolution cryo-electron tomography and subtomogram averaging von Himes, Benjamin A., Zhang, Peijun

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High-resolution in situ structure determination by cryo-electron tomography and subtomogram averaging using emClarity von Ni, Tao, Frosio, Thomas, Mendonça, Luiza, Sheng, Yuewen, Clare, Daniel, Himes, Benjamin A., Zhang, Peijun

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Locating macromolecular assemblies in cells by 2D template matching with cisTEM von Lucas, Bronwyn A, Himes, Benjamin A, Xue, Liang, Grant, Timothy, Mahamid, Julia, Grigorieff, Nikolaus

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Baited reconstruction with 2D template matching for high-resolution structure determination in vitro and in vivo without template bias von Lucas, Bronwyn A, Himes, Benjamin A, Grigorieff, Nikolaus

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Cyclophilin A stabilizes the HIV-1 capsid through a novel non-canonical binding site von Liu, Chuang, Perilla, Juan R., Ning, Jiying, Lu, Manman, Hou, Guangjin, Ramalho, Ruben, Himes, Benjamin A., Zhao, Gongpu, Bedwell, Gregory J., Byeon, In-Ja, Ahn, Jinwoo, Gronenborn, Angela M., Prevelige, Peter E., Rousso, Itay, Aiken, Christopher, Polenova, Tatyana, Schulten, Klaus, Zhang, Peijun

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In vitro protease cleavage and computer simulations reveal the HIV-1 capsid maturation pathway von Ning, Jiying, Erdemci-Tandogan, Gonca, Yufenyuy, Ernest L., Wagner, Jef, Himes, Benjamin A., Zhao, Gongpu, Aiken, Christopher, Zandi, Roya, Zhang, Peijun

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CryoEM and computer simulations reveal a novel kinase conformational switch in bacterial chemotaxis signaling von Cassidy, C Keith, Himes, Benjamin A, Alvarez, Frances J, Ma, Jun, Zhao, Gongpu, Perilla, Juan R, Schulten, Klaus, Zhang, Peijun

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CryoET structures of immature HIV Gag reveal six-helix bundle von Mendonça, Luiza, Sun, Dapeng, Ning, Jiying, Liu, Jiwei, Kotecha, Abhay, Olek, Mateusz, Frosio, Thomas, Fu, Xiaofeng, Himes, Benjamin A., Kleinpeter, Alex B., Freed, Eric O., Zhou, Jing, Aiken, Christopher, Zhang, Peijun

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CryoEM-based hybrid modeling approaches for structure determination von Cassidy, C Keith, Himes, Benjamin A, Luthey-Schulten, Zaida, Zhang, Peijun

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Application of super-resolution and correlative double sampling in cryo-electron microscopy von Sheng, Yuewen, Harrison, Peter J, Vogirala, Vinod, Yang, Zhengyi, Strain-Damerell, Claire, Frosio, Thomas, Himes, Benjamin A, Siebert, C. Alistair, Zhang, Peijun, Clare, Daniel K

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Controlled Bacterial Lysis for Electron Tomography of Native Cell Membranes von Fu, Xiaofeng, Himes, Benjamin A., Ke, Danxia, Rice, William J., Ning, Jiying, Zhang, Peijun

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Structure and dynamics of the E. coli chemotaxis core signaling complex by cryo-electron tomography and molecular simulations von Cassidy, C. Keith, Himes, Benjamin A., Sun, Dapeng, Ma, Jun, Zhao, Gongpu, Parkinson, John S., Stansfeld, Phillip J., Luthey-Schulten, Zaida, Zhang, Peijun

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emClarity: Software for High Resolution Cryo-electron Tomography and Sub-tomogram Averaging von Himes, Benjamin A., Zhang, Peijun

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Baited reconstruction with 2D template matching for high-resolution structure determination in vitro and in vivo without template bias von Lucas, Bronwyn A, Himes, Benjamin A, Grigorieff, Nikolaus

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Cryo-TEM simulations of amorphous radiation-sensitive samples using multislice wave propagation von Himes, Benjamin, Grigorieff, Nikolaus

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Cryo-Electron Tomography and Computer Simulations Reveal Distinct CheA Kinase Conformation in Bacterial Chemotaxis Signaling Receptor Complex von Himes, Benjamin A., Cassidy, C. Keith, Ma, Jun, Alvarez, Frances Joan D., Perilla, Juan R., Zhao, Gongpu, Schulten, Klaus, Zhang, Peijun

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METHODS AND SYSTEMS FOR IMAGING INTERACTIONS BETWEEN PARTICLES AND FRAGMENTS von GRIGORIEFF, Nikolaus, HIMES, Benjamin A, LUCAS, Bronwyn A

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In vitro protease cleavage and computer simulations reveal the HIV-1 capsid maturation pathway von Ning, Jiying, Erdemci-Tandogan, Gonca, Yufenyuy, Ernest L, Wagner, Jef, Himes, Benjamin A, Zhao, Gongpu, Aiken, Christopher, Zandi, Roya, Zhang, Peijun

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Classification in cryo-electron tomograms von Gubins, I, van der Schot, G, Veltkamp, R.C, Förster, F.G, Du, X, Zeng, X, Zhu, Z, Chang, L, Xu, Min, Moebel, Emmanuel, Martinez-Sanchez, Antonio, Kervrann, Charles, Lai, T, Han, Terashi, Kihara, Himes, Benjamin A, Wan, Zhang, Gao, Hao, Lv, Yang, Ding, Cui

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Mapping atomic models back into cells – visual proteomics and in situ structure determination von Himes, Benjamin

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