GROMACS: Fast, flexible, and free von Van Der Spoel, David, Lindahl, Erik, Hess, Berk, Groenhof, Gerrit, Mark, Alan E., Berendsen, Herman J. C.

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High-Throughput Simulations Reveal Membrane-Mediated Effects of Alcohols on MscL Gating von Melo, Manuel N, Arnarez, Clément, Sikkema, Hendrik, Kumar, Neeraj, Walko, Martin, Berendsen, Herman J. C, Kocer, Armagan, Marrink, Siewert J, Ingólfsson, Helgi I

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Photoactivation of the Photoactive Yellow Protein:  Why Photon Absorption Triggers a Trans-to-Cis Isomerization of the Chromophore in the Protein von Groenhof, Gerrit, Bouxin-Cademartory, Mathieu, Hess, Berk, de Visser, Sam P., Berendsen, Herman J. C., Olivucci, Massimo, Mark, Alan E., Robb, Michael A.

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Phantasmidine: An Epibatidine Congener from the Ecuadorian Poison Frog Epipedobates anthonyi von Fitch, Richard W, Spande, Thomas F, Garraffo, H. Martin, Yeh, Herman J. C, Daly, John W

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Dynamic Conformations of Flavin Adenine Dinucleotide:  Simulated Molecular Dynamics of the Flavin Cofactor Related to the Time-Resolved Fluorescence Characteristics von van den Berg, Petra A. W, Feenstra, K. Anton, Mark, Alan E, Berendsen, Herman J. C, Visser, Antonie J. W. G

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Considerations on corrosion and weld repair effects on the fatigue strength of a steel structure critical to the flight-safety von Nascimento, Marcelino P., Voorwald, Herman J.C.

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Calculation of the Redox Potential of the Protein Azurin and Some Mutants von van den Bosch, Marieke, Swart, Marcel, Snijders†, Jaap G, Berendsen, Herman J.C, Mark, Alan E, Oostenbrink, Chris, van Gunsteren, Wilfred F, Canters, Gerard W

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Sugarcane bagasse cellulose/HDPE composites obtained by extrusion von Mulinari, Daniella Regina, Voorwald, Herman J.C., Cioffi, Maria Odila H., da Silva, Maria Lúcia C.P., da Cruz, Tessie Gouvêa, Saron, Clodoaldo

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Bioassay-Guided Isolation of Epiquinamide, a Novel Quinolizidine Alkaloid and Nicotinic Agonist from an Ecuadoran Poison Frog, Epipedobates tricolor von FITCH, Richard W., GARRAFFO, H. Martin, SPANDE, Thomas F., YEH, Herman J. C., DALY, John W.

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Improving efficiency of large time-scale molecular dynamics simulations of hydrogen-rich systems von Feenstra, K. Anton, Hess, Berk, Berendsen, Herman J. C.

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Determining equilibrium constants for dimerization reactions from molecular dynamics simulations von De Jong, Djurre H., Schäfer, Lars V., De Vries, Alex H., Marrink, Siewert J., Berendsen, Herman J. C., Grubmüller, Helmut

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Signal transduction in the photoactive yellow protein. I. Photon absorption and the isomerization of the chromophore von Groenhof, Gerrit, Lensink, Marc F., Berendsen, Herman J. C., Snijders, Jaap G., Mark, Alan E.

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Preparation and properties of HDPE/sugarcane bagasse cellulose composites obtained for thermokinetic mixer von Mulinari, Daniella R., Voorwald, Herman J.C., Cioffi, Maria Odila H., da Silva, Maria Lúcia C.P., Luz, Sandra M.

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Reducing repair dimension with variable scarf angles von Pitanga, Midori Y., Cioffi, Maria Odila H., Voorwald, Herman J.C., Wang, Chun H.

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The AUUCU Repeats Responsible for Spinocerebellar Ataxia Type 10 Form Unusual RNA Hairpins von Handa, Vaishali, Yeh, Herman J.C., McPhie, Peter, Usdin, Karen

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Permeation Process of Small Molecules across Lipid Membranes Studied by Molecular Dynamics Simulations von Marrink, Siewert J, Berendsen, Herman J. C

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A Glimpse of the Holy Grail? von BERENDSEN, H. J. C

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Molecular dynamics simulation of a membrane/water interface: the ordering of water and its relation to the hydration force von Marrink, Siewert Jan, Berkowitz, Max, Berendsen, Herman J. C

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Computer Simulation of Urea−Water Mixtures:  A Test of Force Field Parameters for Use in Biomolecular Simulation von Smith, Lorna J, Berendsen, Herman J. C, van Gunsteren, Wilfred F

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Simulation of water transport through a lipid membrane von Marrink, Siewert-Jan, Berendsen, Herman J. C

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