Transcriptome analysis of controlled and therapy-resistant childhood asthma reveals distinct gene expression profiles von Persson, Helena, PhD, Kwon, Andrew T., PhD, Ramilowski, Jordan A., PhD, Silberberg, Gilad, PhD, Söderhäll, Cilla, PhD, Orsmark-Pietras, Christina, PhD, Nordlund, Björn, RN, PhD, Konradsen, Jon R., MD, PhD, de Hoon, Michiel J.L., PhD, Melén, Erik, MD, PhD, Hayashizaki, Yoshihide, MD, PhD, Hedlin, Gunilla, MD, PhD, Kere, Juha, MD, PhD, Daub, Carsten O., PhD

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Estimation of the adult mortality of the Japanese pine sawyer, Monochamus alternatus Hope (Coleoptera: Cerambycidae), due to aerial application of insecticide (MEP-MC) in Sakurajim... von Sone, K., Kagoshima Univ. (Japan). Faculty of Agricultue, Hata, K, Nagano, S, Nakano, H, Hayashizaki, D, Morita, S

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A comprehensive map of insulator elements for the Drosophila genome von Nègre, Nicolas, Brown, Christopher D, Shah, Parantu K, Kheradpour, Pouya, Morrison, Carolyn A, Henikoff, Jorja G, Feng, Xin, Ahmad, Kami, Russell, Steven, White, Robert A H, Stein, Lincoln, Henikoff, Steven, Kellis, Manolis, White, Kevin P

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Gateways to the FANTOM5 promoter level mammalian expression atlas von Lizio, Marina, Harshbarger, Jayson, Shimoji, Hisashi, Severin, Jessica, Kasukawa, Takeya, Sahin, Serkan, Abugessaisa, Imad, Fukuda, Shiro, Hori, Fumi, Ishikawa-Kato, Sachi, Mungall, Christopher J, Arner, Erik, Baillie, J Kenneth, Bertin, Nicolas, Bono, Hidemasa, de Hoon, Michiel, Diehl, Alexander D, Dimont, Emmanuel, Freeman, Tom C, Fujieda, Kaori, Hide, Winston, Kaliyaperumal, Rajaram, Katayama, Toshiaki, Lassmann, Timo, Meehan, Terrence F, Nishikata, Koro, Ono, Hiromasa, Rehli, Michael, Sandelin, Albin, Schultes, Erik A, 't Hoen, Peter A C, Tatum, Zuotian, Thompson, Mark, Toyoda, Tetsuro, Wright, Derek W, Daub, Carsten O, Itoh, Masayoshi, Carninci, Piero, Hayashizaki, Yoshihide, Forrest, Alistair R R, Kawaji, Hideya

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Induction of microRNAs, mir-155, mir-222, mir-424 and mir-503, promotes monocytic differentiation through combinatorial regulation von Forrest, A R R, Kanamori-Katayama, M, Tomaru, Y, Lassmann, T, Ninomiya, N, Takahashi, Y, de Hoon, M J L, Kubosaki, A, Kaiho, A, Suzuki, M, Yasuda, J, Kawai, J, Hayashizaki, Y, Hume, D A, Suzuki, H

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A new approach for measuring the muon anomalous magnetic moment and electric dipole moment von Abe, M, Bae, S, Beer, G, Bunce, G, Choi, H, Choi, S, Chung, M, da Silva, W, Eidelman, S, Finger, M, Fukao, Y, Fukuyama, T, Haciomeroglu, S, Hasegawa, K, Hayasaka, K, Hayashizaki, N, Hisamatsu, H, Iijima, T, Iinuma, H, Ikeda, H, Ikeno, M, Inami, K, Ishida, K, Itahashi, T, Iwasaki, M, Iwashita, Y, Iwata, Y, Kadono, R, Kamal, S, Kamitani, T, Kanda, S, Kapusta, F, Kawagoe, K, Kawamura, N, Kim, B, Kim, Y, Kishishita, T, Kitamura, R, Ko, H, Kohriki, T, Kondo, Y, Kume, T, Lee, M J, Lee, S, Lee, W, Marshall, G M, Matsuda, Y, Mibe, T, Miyake, Y, Murakami, T, Nagamine, K, Nakayama, H, Nishimura, S, Nomura, D, Ogitsu, T, Ohsawa, S, Oide, K, Oishi, Y, Okada, S, Olin, A, Omarov, Z, Otani, M, Razuvaev, G, Rehman, A, Saito, N, Saito, N F, Sasaki, K, Sasaki, O, Sato, N, Sato, Y, Semertzidis, Y K, Sendai, H, Shatunov, Y, Shimomura, K, Shoji, M, Shwartz, B, Strasser, P, Sue, Y, Suehara, T, Sung, C, Suzuki, K, Takatomi, T, Tanaka, M, Tojo, J, Tsutsumi, Y, Uchida, T, Ueno, K, Wada, S, Won, E, Yamaguchi, H, Yamanaka, T, Yamamoto, A, Yamazaki, T, Yasuda, H, Yoshida, M, Yoshioka, T

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An Atlas of Combinatorial Transcriptional Regulation in Mouse and Man von Ravasi, Timothy, Suzuki, Harukazu, Cannistraci, Carlo Vittorio, Katayama, Shintaro, Bajic, Vladimir B., Tan, Kai, Akalin, Altuna, Schmeier, Sebastian, Kanamori-Katayama, Mutsumi, Bertin, Nicolas, Carninci, Piero, Daub, Carsten O., Forrest, Alistair R.R., Gough, Julian, Grimmond, Sean, Han, Jung-Hoon, Hashimoto, Takehiro, Hide, Winston, Hofmann, Oliver, Kamburov, Atanas, Kaur, Mandeep, Kawaji, Hideya, Kubosaki, Atsutaka, Lassmann, Timo, van Nimwegen, Erik, MacPherson, Cameron Ross, Ogawa, Chihiro, Radovanovic, Aleksandar, Schwartz, Ariel, Teasdale, Rohan D., Tegnér, Jesper, Lenhard, Boris, Teichmann, Sarah A., Arakawa, Takahiro, Ninomiya, Noriko, Murakami, Kayoko, Tagami, Michihira, Fukuda, Shiro, Imamura, Kengo, Kai, Chikatoshi, Ishihara, Ryoko, Kitazume, Yayoi, Kawai, Jun, Hume, David A., Ideker, Trey, Hayashizaki, Yoshihide

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Experimental validation of the regulated expression of large numbers of non-coding RNAs from the mouse genome von Ravasi, Timothy, Suzuki, Harukazu, Pang, Ken C, Katayama, Shintaro, Furuno, Masaaki, Okunishi, Rie, Fukuda, Shiro, Ru, Kelin, Frith, Martin C, Gongora, M Milena, Grimmond, Sean M, Hume, David A, Hayashizaki, Yoshihide, Mattick, John S

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Cap Analysis Gene Expression for High-Throughput Analysis of Transcriptional Starting Point and Identification of Promoter Usage von Shiraki, Toshiyuki, Kondo, Shinji, Katayama, Shintaro, Waki, Kazunori, Kasukawa, Takeya, Kawaji, Hideya, Kodzius, Rimantas, Watahiki, Akira, Nakamura, Mari, Arakawa, Takahiro, Fukuda, Shiro, Sasaki, Daisuke, Podhajska, Anna, Harbers, Matthias, Kawai, Jun, Carninci, Piero, Hayashizaki, Yoshihide

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Update of the FANTOM web resource: high resolution transcriptome of diverse cell types in mammals von Lizio, Marina, Harshbarger, Jayson, Abugessaisa, Imad, Noguchi, Shuei, Kondo, Atsushi, Severin, Jessica, Mungall, Chris, Arenillas, David, Mathelier, Anthony, Medvedeva, Yulia A, Lennartsson, Andreas, Drabløs, Finn, Ramilowski, Jordan A, Rackham, Owen, Gough, Julian, Andersson, Robin, Sandelin, Albin, Ienasescu, Hans, Ono, Hiromasa, Bono, Hidemasa, Hayashizaki, Yoshihide, Carninci, Piero, Forrest, Alistair R R, Kasukawa, Takeya, Kawaji, Hideya

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Fabrication and cold test of dielectric assist accelerating structure von Satoh, D., Yoshida, M., Hayashizaki, N.

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Dielectric assist accelerating structure von Satoh, D., Yoshida, M., Hayashizaki, N.

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Antisense Transcription in the Mammalian Transcriptome von Katayama, S, Tomaru, Y, Kasukawa, T, Waki, K, Nakanishi, M, Nakamura, M, Nishida, H, Yap, C. C, Suzuki, M, Kawai, J, Suzuki, H, Carninci, P, Hayashizaki, Y, Wells, C, Frith, M, Ravasi, T, Pang, K. C, Hallinan, J, Mattick, J, Hume, D. A, Lipovich, L, Batalov, S, Engström, P. G, Mizuno, Y, Faghihi, M. A, Sandelin, A, Chalk, A. M, Mottagui-Tabar, S, Liang, Z, Lenhard, B, Wahlestedt, C

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CAGE: cap analysis of gene expression von Kodzius, Rimantas, Kojima, Miki, Nishiyori, Hiromi, Nakamura, Mari, Fukuda, Shiro, Tagami, Michihira, Sasaki, Daisuke, Imamura, Kengo, Kai, Chikatoshi, Harbers, Matthias, Hayashizaki, Yoshihide, Carninci, Piero

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Research and development of iridium cerium photocathode for SuperKEKB injector linac von Satoh, D., Shibuya, T., Hayashizaki, N., Zhang, R., Zhou, X., Natsui, T., Yoshida, M.

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Impact of alternative initiation, splicing, and termination on the diversity of the mRNA transcripts encoded by the mouse transcriptome von Zavolan, Mihaela, Kondo, Shinji, Schonbach, Christian, Adachi, Jun, Hume, David A, Hayashizaki, Yoshihide, Gaasterland, Terry

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Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project von Birney, Ewan, Stamatoyannopoulos, John A, Dutta, Anindya, Guigó, Roderic, Gingeras, Thomas R, Margulies, Elliott H, Weng, Zhiping, Snyder, Michael, Dermitzakis, Emmanouil T, Thurman, Robert E, Kuehn, Michael S, Taylor, Christopher M, Neph, Shane, Koch, Christoph M, Asthana, Saurabh, Malhotra, Ankit, Adzhubei, Ivan, Greenbaum, Jason A, Andrews, Robert M, Flicek, Paul, Boyle, Patrick J, Cao, Hua, Carter, Nigel P, Clelland, Gayle K, Davis, Sean, Day, Nathan, Dhami, Pawandeep, Dillon, Shane C, Dorschner, Michael O, Fiegler, Heike, Giresi, Paul G, Goldy, Jeff, Hawrylycz, Michael, Haydock, Andrew, Humbert, Richard, James, Keith D, Johnson, Brett E, Johnson, Ericka M, Frum, Tristan T, Rosenzweig, Elizabeth R, Karnani, Neerja, Lee, Kirsten, Lefebvre, Gregory C, Navas, Patrick A, Neri, Fidencio, Parker, Stephen C J, Sabo, Peter J, Sandstrom, Richard, Shafer, Anthony, Vetrie, David, Weaver, Molly, Wilcox, Sarah, Yu, Man, Collins, Francis S, Dekker, Job, Lieb, Jason D, Tullius, Thomas D, Crawford, Gregory E, Sunyaev, Shamil, Noble, William S, Dunham, Ian, Denoeud, France, Reymond, Alexandre, Kapranov, Philipp, Rozowsky, Joel, Zheng, Deyou, Castelo, Robert, Frankish, Adam, Harrow, Jennifer, Ghosh, Srinka, Sandelin, Albin, Hofacker, Ivo L, Baertsch, Robert, Keefe, Damian, Dike, Sujit, Cheng, Jill, Hirsch, Heather A, Sekinger, Edward A, Lagarde, Julien, Abril, Josep F, Shahab, Atif, Flamm, Christoph, Fried, Claudia, Hackermüller, Jörg, Hertel, Jana, Lindemeyer, Manja, Missal, Kristin, Tanzer, Andrea, Washietl, Stefan, Korbel, Jan, Emanuelsson, Olof, Pedersen, Jakob S, Holroyd, Nancy, Taylor, Ruth, Swarbreck, David, Matthews, Nicholas, Dickson, Mark C, Thomas, Daryl J, Weirauch, Matthew T, Gilbert, James

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A rescue strategy for multimapping short sequence tags refines surveys of transcriptional activity by CAGE von Faulkner, Geoffrey J., Forrest, Alistair R.R., Chalk, Alistair M., Schroder, Kate, Hayashizaki, Yoshihide, Carninci, Piero, Hume, David A., Grimmond, Sean M.

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Identification of novel cerebellar developmental transcriptional regulators with motif activity analysis von Ha, Thomas J, Zhang, Peter G Y, Robert, Remi, Yeung, Joanna, Swanson, Douglas J, Mathelier, Anthony, Wasserman, Wyeth W, Im, Sujin, Itoh, Masayoshi, Kawaji, Hideya, Lassmann, Timo, Daub, Carsten O, Arner, Erik, Carninci, Piero, Hayashizaki, Yoshihide, Forrest, Alistair R R, Goldowitz, Daniel

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A Molecular Neuroethological Approach for Identifying and Characterizing a Cascade of Behaviorally Regulated Genes von Wada, Kazuhiro, Howard, Jason T., McConnell, Patrick, Whitney, Osceola, Lints, Thierry, Rivas, Miriam V., Horita, Haruhito, Patterson, Michael A., White, Stephanie A., Scharff, Constance, Haesler, Sebastian, Zhao, Shengli, Sakaguchi, Hironobu, Hagiwara, Masatoshi, Shiraki, Toshiyuki, Hirozane-Kishikawa, Tomoko, Skene, Pate, Hayashizaki, Yoshihide, Carninci, Piero, Jarvis, Erich D.

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