RIPK3 Activates Parallel Pathways of MLKL-Driven Necroptosis and FADD-Mediated Apoptosis to Protect against Influenza A Virus von Nogusa, Shoko, Thapa, Roshan J., Dillon, Christopher P., Liedmann, Swantje, Oguin, Thomas H., Ingram, Justin P., Rodriguez, Diego A., Kosoff, Rachelle, Sharma, Shalini, Sturm, Oliver, Verbist, Katherine, Gough, Peter J., Bertin, John, Hartmann, Boris M., Sealfon, Stuart C., Kaiser, William J., Mocarski, Edward S., López, Carolina B., Thomas, Paul G., Oberst, Andrew, Green, Douglas R., Balachandran, Siddharth

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Pathway-level information extractor (PLIER) for gene expression data von Mao, Weiguang, Zaslavsky, Elena, Hartmann, Boris M., Sealfon, Stuart C., Chikina, Maria

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Understanding multicellular function and disease with human tissue-specific networks von Greene, Casey S, Krishnan, Arjun, Wong, Aaron K, Ricciotti, Emanuela, Zelaya, Rene A, Himmelstein, Daniel S, Zhang, Ran, Hartmann, Boris M, Zaslavsky, Elena, Sealfon, Stuart C, Chasman, Daniel I, FitzGerald, Garret A, Dolinski, Kara, Grosser, Tilo, Troyanskaya, Olga G

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Genetic pathway in acquisition and loss of vancomycin resistance in a methicillin resistant Staphylococcus aureus (MRSA) strain of clonal type USA300 von Gardete, Susana, Kim, Choonkeun, Hartmann, Boris M, Mwangi, Michael, Roux, Christelle M, Dunman, Paul M, Chambers, Henry F, Tomasz, Alexander

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Different tissue phagocytes sample apoptotic cells to direct distinct homeostasis programs von Cummings, Ryan J., Barbet, Gaetan, Bongers, Gerold, Hartmann, Boris M., Gettler, Kyle, Muniz, Luciana, Furtado, Glaucia C., Cho, Judy, Lira, Sergio A., Blander, J. Magarian

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High-density single cell mRNA sequencing to characterize circulating tumor cells in hepatocellular carcinoma von D’Avola, Delia, Villacorta-Martin, Carlos, Martins-Filho, Sebastiao N., Craig, Amanda, Labgaa, Ismail, von Felden, Johann, Kimaada, Allette, Bonaccorso, Antoinette, Tabrizian, Parissa, Hartmann, Boris M., Sebra, Robert, Schwartz, Myron, Villanueva, Augusto

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Interactive Big Data Resource to Elucidate Human Immune Pathways and Diseases von Gorenshteyn, Dmitriy, Zaslavsky, Elena, Fribourg, Miguel, Park, Christopher Y., Wong, Aaron K., Tadych, Alicja, Hartmann, Boris M., Albrecht, Randy A., García-Sastre, Adolfo, Kleinstein, Steven H., Troyanskaya, Olga G., Sealfon, Stuart C.

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Deciphering the combinatorial landscape of immunity von Cappuccio, Antonio, Jensen, Shane T., Hartmann, Boris M., Sealfon, Stuart C., Soumelis, Vassili, Zaslavsky, Elena

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Innate Immune Response to Influenza Virus at Single-Cell Resolution in Human Epithelial Cells Revealed Paracrine Induction of Interferon Lambda 1 von Ramos, Irene, Smith, Gregory, Ruf-Zamojski, Frederique, Martínez-Romero, Carles, Fribourg, Miguel, Carbajal, Edwin A, Hartmann, Boris M, Nair, Venugopalan D, Marjanovic, Nada, Monteagudo, Paula L, DeJesus, Veronica A, Mutetwa, Tinaye, Zamojski, Michel, Tan, Gene S, Jayaprakash, Ciriyam, Zaslavsky, Elena, Albrecht, Randy A, Sealfon, Stuart C, García-Sastre, Adolfo, Fernandez-Sesma, Ana

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Pandemic H1N1 influenza A viruses suppress immunogenic RIPK3-driven dendritic cell death von Hartmann, Boris M., Albrecht, Randy A., Zaslavsky, Elena, Nudelman, German, Pincas, Hanna, Marjanovic, Nada, Schotsaert, Michael, Martínez-Romero, Carles, Fenutria, Rafael, Ingram, Justin P., Ramos, Irene, Fernandez-Sesma, Ana, Balachandran, Siddharth, García-Sastre, Adolfo, Sealfon, Stuart C.

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Differential Modulation of Innate Immune Responses in Human Primary Cells by Influenza A Viruses Carrying Human or Avian Nonstructural Protein 1 von Monteagudo, Paula L., Munoz-Moreno, Raquel, Fribourg, Miguel, Potla, Uma, Mena, Ignacio, Marjanovic, Nada, Hartmann, Boris M., Sealfon, Stuart C., Garcia-Sastre, Adolfo, Ramos, Irene, Fernandez-Sesma, Ana

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Comparing Host Module Activation Patterns and Temporal Dynamics in Infection by Influenza H1N1 Viruses von Nudelman, Irina, Kudrin, Daniil, Nudelman, German, Deshpande, Raamesh, Hartmann, Boris M. M., Kleinstein, Steven H., Myers, Chad L. L., Sealfon, Stuart C. C., Zaslavsky, Elena

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Mass cytometry profiling the response of basophils and the complete peripheral blood compartment to peanut von Tordesillas, Leticia, PhD, Rahman, Adeeb H., PhD, Hartmann, Boris M., PhD, Sampson, Hugh A., MD, Berin, M. Cecilia, PhD

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Evaluation of a Novel Parent-Rated Scale for Selective Mutism von Gensthaler, Angelika, Dieter, Julia, Raisig, Susanne, Hartmann, Boris, Ligges, Marc, Kaess, Michael, Freitag, Christine M., Schwenck, Christina

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Single-cell stabilization method identifies gonadotrope transcriptional dynamics and pituitary cell type heterogeneity von Ruf-Zamojski, Frederique, Ge, Yongchao, Nair, Venugopalan, Zamojski, Michel, Pincas, Hanna, Toufaily, Chirine, Tome-Garcia, Jessica, Stoeckius, Marlon, Stephenson, William, Smith, Gregory R, Bernard, Daniel J, Tsankova, Nadejda M, Hartmann, Boris M, Fribourg, Miguel, Smibert, Peter, Swerdlow, Harold, Turgeon, Judith L, Sealfon, Stuart C

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P2X-selective purinergic antagonists are strong inhibitors of HIV-1 fusion during both cell-to-cell and cell-free infection von Swartz, Talia H, Esposito, Anthony M, Durham, Natasha D, Hartmann, Boris M, Chen, Benjamin K

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Innate Immune Training with Bacterial Extracts Enhances Lung Macrophage Recruitment to Protect from Betacoronavirus Infection von Salzmann, Manuel, Haider, Patrick, Kaun, Christoph, Brekalo, Mira, Hartmann, Boris, Lengheimer, Theresia, Pichler, Rebecca, Filip, Thomas, Derdak, Sophia, Podesser, Bruno, Hengstenberg, Christian, Speidl, Walter S., Wojta, Johann, Plasenzotti, Roberto, Hohensinner, Philipp J.

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Human Dendritic Cell Response Signatures Distinguish 1918, Pandemic, and Seasonal H1N1 Influenza Viruses von Hartmann, Boris M, Thakar, Juilee, Albrecht, Randy A, Avey, Stefan, Zaslavsky, Elena, Marjanovic, Nada, Chikina, Maria, Fribourg, Miguel, Hayot, Fernand, Schmolke, Mirco, Meng, Hailong, Wetmur, James, García-Sastre, Adolfo, Kleinstein, Steven H, Sealfon, Stuart C

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Interpretation of an individual functional genomics experiment guided by massive public data von Lee, Young-suk, Wong, Aaron K., Tadych, Alicja, Hartmann, Boris M., Park, Christopher Y., DeJesus, Veronica A., Ramos, Irene, Zaslavsky, Elena, Sealfon, Stuart C., Troyanskaya, Olga G.

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Reconstruction of regulatory networks through temporal enrichment profiling and its application to H1N1 influenza viral infection von Zaslavsky, Elena, Nudelman, German, Marquez, Susanna, Hershberg, Uri, Hartmann, Boris M, Thakar, Juilee, Sealfon, Stuart C, Kleinstein, Steven H

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