The emergence and ongoing convergent evolution of the SARS-CoV-2 N501Y lineages von Martin, Darren P., Weaver, Steven, Tegally, Houriiyah, San, James Emmanuel, Shank, Stephen D., Wilkinson, Eduan, Lucaci, Alexander G., Giandhari, Jennifer, Naidoo, Sureshnee, Pillay, Yeshnee, Singh, Lavanya, Lessells, Richard J., Gupta, Ravindra K., Wertheim, Joel O., Nekturenko, Anton, Murrell, Ben, Harkins, Gordon W., Lemey, Philippe, MacLean, Oscar A., Robertson, David L., de Oliveira, Tulio, Kosakovsky Pond, Sergei L.

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Selection Analysis Identifies Clusters of Unusual Mutational Changes in Omicron Lineage BA.1 That Likely Impact Spike Function von Martin, Darren P., Lytras, Spyros, Lucaci, Alexander G., Maier, Wolfgang, Grüning, Björn, Shank, Stephen D., Weaver, Steven, MacLean, Oscar A., Orton, Richard J., Lemey, Philippe, Boni, Maciej F., Tegally, Houriiyah, Harkins, Gordon W., Scheepers, Cathrine, Bhiman, Jinal N., Everatt, Josie, Amoako, Daniel G., San, James Emmanuel, Giandhari, Jennifer, Sigal, Alex, Williamson, Carolyn, Hsiao, Nei-yuan, von Gottberg, Anne, De Klerk, Arne, Shafer, Robert W., Robertson, David L., Wilkinson, Robert J., Sewell, B. Trevor, Lessells, Richard, Nekrutenko, Anton, Greaney, Allison J., Starr, Tyler N., Bloom, Jesse D., Murrell, Ben, Wilkinson, Eduan, Gupta, Ravindra K., de Oliveira, Tulio, Kosakovsky Pond, Sergei L.

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Selection analysis identifies clusters of unusual mutational changes in Omicron lineage BA.1 that likely impact Spike function von Martin, DP, Spyros, L, Lucaci, AG, Maier, W, Gruning, B, Shank, SD, Weaver, S, MacLean, OA, Orton, RJ, Lemey, P, Boni, MF, Tegally, H, Harkins, GW, Scheepers, C, Bhiman, JN, Everatt, J, Amoako, DG, San, JE, Giandhari, J, Sigal, A, Williamson, C, Hsiao, N-Y, Von Gottberg, A, De Klerk, A, Shafer, RW, Robertson, DL, Wilkinson, RJ, Sewell, TS, Lessells, R, Nekrutenko, A, Greaney, AJ, Starr, TN, Bloom, JD, Murrell, B, Wilkinson, E, Gupta, RK, De Oliveira, T, Kosakovsky Pond, SL

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The emergence and ongoing convergent evolution of the N501Y lineages coincides with a major global shift in the SARS-CoV-2 selective landscape von Martin, DP, Weaver, S, Tegally, H, San, EJ, Shank, SD, Wilkinson, E, Lucaci, AG, Giandhari, J, Naidoo, S, Pillay, Y, Singh, L, Lessells, RJ, Gupta, RK, Wertheim, JO, Nekturenko, A, Murrell, B, Harkins, GW, Lemey, P, MacLean, OA, Robertson, DL, de Oliveira, T, Kosakovsky Pond, SL

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