Occupancy maps of 208 chromatin-associated proteins in one human cell type von Partridge, E. Christopher, Chhetri, Surya B., Prokop, Jeremy W., Ramaker, Ryne C., Jansen, Camden S., Goh, Say-Tar, Mackiewicz, Mark, Newberry, Kimberly M., Brandsmeier, Laurel A., Meadows, Sarah K., Messer, C. Luke, Hardigan, Andrew A., Coppola, Candice J., Dean, Emma C., Jiang, Shan, Savic, Daniel, Mortazavi, Ali, Wold, Barbara J., Myers, Richard M., Mendenhall, Eric M.

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A comparison of the inflammatory and proteolytic effects of dung biomass and cigarette smoke exposure in the lung von Mehra, Divya, Geraghty, Patrick M, Hardigan, Andrew A, Foronjy, Robert

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Post-mortem molecular profiling of three psychiatric disorders von Ramaker, Ryne C, Bowling, Kevin M, Lasseigne, Brittany N, Hagenauer, Megan H, Hardigan, Andrew A, Davis, Nicholas S, Gertz, Jason, Cartagena, Preston M, Walsh, David M, Vawter, Marquis P, Jones, Edward G, Schatzberg, Alan F, Barchas, Jack D, Watson, Stanley J, Bunney, Blynn G, Akil, Huda, Bunney, William E, Li, Jun Z, Cooper, Sara J, Myers, Richard M

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Pooled CRISPR screening in pancreatic cancer cells implicates co-repressor complexes as a cause of multiple drug resistance via regulation of epithelial-to-mesenchymal transition von Ramaker, Ryne C., Hardigan, Andrew A., Gordon, Emily R., Wright, Carter A., Myers, Richard M., Cooper, Sara J.

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Mutations in EBF3 Disturb Transcriptional Profiles and Cause Intellectual Disability, Ataxia, and Facial Dysmorphism von Harms, Frederike Leonie, Girisha, Katta M., Hardigan, Andrew A., Kortüm, Fanny, Shukla, Anju, Alawi, Malik, Dalal, Ashwin, Brady, Lauren, Tarnopolsky, Mark, Bird, Lynne M., Ceulemans, Sophia, Bebin, Martina, Bowling, Kevin M., Hiatt, Susan M., Lose, Edward J., Primiano, Michelle, Chung, Wendy K., Juusola, Jane, Akdemir, Zeynep C., Bainbridge, Matthew, Charng, Wu-Lin, Drummond-Borg, Margaret, Eldomery, Mohammad K., El-Hattab, Ayman W., Saleh, Mohammed A.M., Bézieau, Stéphane, Cogné, Benjamin, Isidor, Bertrand, Küry, Sébastien, Lupski, James R., Myers, Richard M., Cooper, Gregory M., Kutsche, Kerstin

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Discovery and Validation of Circulating Biomarkers of Colorectal Adenoma by High-Depth Small RNA Sequencing von Roberts, Brian S, Hardigan, Andrew A, Moore, Dianna E, Ramaker, Ryne C, Jones, Angela L, Fitz-Gerald, Meredith B, Cooper, Gregory M, Wilcox, C Mel, Kimberly, Robert P, Myers, Richard M

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The glutathione peroxidase 1-protein tyrosine phosphatase 1B-protein phosphatase 2A axis. A key determinant of airway inflammation and alveolar destruction von Geraghty, Patrick, Hardigan, Andrew A, Wallace, Alison M, Mirochnitchenko, Oleg, Thankachen, Jincy, Arellanos, Leo, Thompson, Victor, D'Armiento, Jeanine M, Foronjy, Robert F

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Liquid biopsies in epilepsy: biomarkers for etiology, diagnosis, prognosis, and therapeutics von Whitlock, Jordan H., Soelter, Tabea M., Williams, Avery S., Hardigan, Andrew A., Lasseigne, Brittany N.

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Increased matrix metalloproteinase (MMPs) levels do not predict disease severity or progression in emphysema von D'Armiento, Jeanine M, Goldklang, Monica P, Hardigan, Andrew A, Geraghty, Patrick, Roth, Michael D, Connett, John E, Wise, Robert A, Sciurba, Frank C, Scharf, Steven M, Thankachen, Jincy, Islam, Monirul, Ghio, Andrew J, Foronjy, Robert F

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Nucleic acid liquid biopsies in Alzheimer's disease: current state, challenges, and opportunities von Soelter, Tabea M., Whitlock, Jordan H., Williams, Avery S., Hardigan, Andrew A., Lasseigne, Brittany N.

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Dissecting the regulatory activity and sequence content of loci with exceptional numbers of transcription factor associations von Ramaker, Ryne C., Hardigan, Andrew A., Goh, Say-Tar, Partridge, E. Christopher, Wold, Barbara, Cooper, Sara J., Myers, Richard M.

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CRISPR/Cas9-targeted removal of unwanted sequences from small-RNA sequencing libraries von Hardigan, Andrew A, Roberts, Brian S, Moore, Dianna E, Ramaker, Ryne C, Jones, Angela L, Myers, Richard M

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Robotic-Assisted Minimally Invasive Spinopelvic Fixation for Traumatic Sacral Fractures: Case Series Investigating Early Safety and Efficacy von Hardigan, Andrew A., Tabarestani, Troy Q., Dibble, Christopher F., Johnson, Eli, Wang, Timothy Y., Albanese, Jessica, Karikari, Isaac O., DeBaun, Malcolm R., Abd-El-Barr, Muhammad M.

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aRNApipe: a balanced, efficient and distributed pipeline for processing RNA-seq data in high-performance computing environments von Alonso, Arnald, Lasseigne, Brittany N, Williams, Kelly, Nielsen, Josh, Ramaker, Ryne C, Hardigan, Andrew A, Johnston, Bobbi, Roberts, Brian S, Cooper, Sara J, Marsal, Sara, Myers, Richard M

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A genome-wide interactome of DNA-associated proteins in the human liver von Ramaker, Ryne C, Savic, Daniel, Hardigan, Andrew A, Newberry, Kimberly, Cooper, Gregory M, Myers, Richard M, Cooper, Sara J

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RNA sequencing-based cell proliferation analysis across 19 cancers identifies a subset of proliferation-informative cancers with a common survival signature von Ramaker, Ryne C, Lasseigne, Brittany N, Hardigan, Andrew A, Palacio, Laura, Gunther, David S, Myers, Richard M, Cooper, Sara J

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De novo mutations in the GTP/GDP-binding region of RALA, a RAS-like small GTPase, cause intellectual disability and developmental delay von Hiatt, Susan M, Neu, Matthew B, Ramaker, Ryne C, Hardigan, Andrew A, Prokop, Jeremy W, Hancarova, Miroslava, Prchalova, Darina, Havlovicova, Marketa, Prchal, Jan, Stranecky, Viktor, Yim, Dwight K C, Powis, Zöe, Keren, Boris, Nava, Caroline, Mignot, Cyril, Rio, Marlene, Revah-Politi, Anya, Hemati, Parisa, Stong, Nicholas, Iglesias, Alejandro D, Suchy, Sharon F, Willaert, Rebecca, Wentzensen, Ingrid M, Wheeler, Patricia G, Brick, Lauren, Kozenko, Mariya, Hurst, Anna C E, Wheless, James W, Lacassie, Yves, Myers, Richard M, Barsh, Gregory S, Sedlacek, Zdenek, Cooper, Gregory M

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Decoding transcriptional enhancers: Evolving from annotation to functional interpretation von Engel, Krysta L., Mackiewicz, Mark, Hardigan, Andrew A., Myers, Richard M., Savic, Daniel

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Successful coil embolization of a ruptured pseudoaneurysm of the superior gluteal artery after a percutaneous awake robot-assisted sacroiliac joint fusion: illustrative case von Morsi, Samah, Bartlett, Alyssa M, Hardigan, Andrew A, Paturu, Mounica, Adams, Shawn W, DeBaun, Malcolm R, Pabon-Ramos, Waleska, Abd-El-Barr, Muhammad M

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Blocking of targeted microRNAs from next-generation sequencing libraries von Roberts, Brian S, Hardigan, Andrew A, Kirby, Marie K, Fitz-Gerald, Meredith B, Wilcox, C Mel, Kimberly, Robert P, Myers, Richard M

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