Analysis of the genome and transcriptome of Cryptococcus neoformans var. grubii reveals complex RNA expression and microevolution leading to virulence attenuation von Janbon, Guilhem, Ormerod, Kate L, Paulet, Damien, Byrnes, 3rd, Edmond J, Yadav, Vikas, Chatterjee, Gautam, Mullapudi, Nandita, Hon, Chung-Chau, Billmyre, R Blake, Brunel, François, Bahn, Yong-Sun, Chen, Weidong, Chen, Yuan, Chow, Eve W L, Coppée, Jean-Yves, Floyd-Averette, Anna, Gaillardin, Claude, Gerik, Kimberly J, Goldberg, Jonathan, Gonzalez-Hilarion, Sara, Gujja, Sharvari, Hamlin, Joyce L, Hsueh, Yen-Ping, Ianiri, Giuseppe, Jones, Steven, Kodira, Chinnappa D, Kozubowski, Lukasz, Lam, Woei, Marra, Marco, Mesner, Larry D, Mieczkowski, Piotr A, Moyrand, Frédérique, Nielsen, Kirsten, Proux, Caroline, Rossignol, Tristan, Schein, Jacqueline E, Sun, Sheng, Wollschlaeger, Carolin, Wood, Ian A, Zeng, Qiandong, Neuvéglise, Cécile, Newlon, Carol S, Perfect, John R, Lodge, Jennifer K, Idnurm, Alexander, Stajich, Jason E, Kronstad, James W, Sanyal, Kaustuv, Heitman, Joseph, Fraser, James A, Cuomo, Christina A, Dietrich, Fred S

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Bubble-seq analysis of the human genome reveals distinct chromatin-mediated mechanisms for regulating early- and late-firing origins von Mesner, Larry D, Valsakumar, Veena, Cieslik, Marcin, Pickin, Rebecca, Hamlin, Joyce L, Bekiranov, Stefan

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Right Place, Right Time, and Only Once: Replication Initiation in Metazoans von Machida, Yuichi J., Hamlin, Joyce L., Dutta, Anindya

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Cdc45 limits replicon usage from a low density of preRCs in mammalian cells von Wong, Philip G, Winter, Sherry L, Zaika, Elena, Cao, Thinh V, Oguz, Umut, Koomen, John M, Hamlin, Joyce L, Alexandrow, Mark G

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DNA Combing Reveals Intrinsic Temporal Disorder in the Replication of Yeast Chromosome VI von Czajkowsky, Daniel M., Liu, Jie, Hamlin, Joyce L., Shao, Zhifeng

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Isolating Apparently Pure Libraries of Replication Origins from Complex Genomes von Mesner, Larry D., Crawford, Emily L., Hamlin, Joyce L.

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Cdc6 Chromatin Affinity Is Unaffected by Serine-54 Phosphorylation, S-Phase Progression, and Overexpression of Cyclin A von Alexandrow, Mark G., Hamlin, Joyce L.

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Bubble-chip analysis of human origin distributions demonstrates on a genomic scale significant clustering into zones and significant association with transcription von Mesner, Larry D, Valsakumar, Veena, Karnani, Neerja, Dutta, Anindya, Hamlin, Joyce L, Bekiranov, Stefan

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Initiation Sites Are Distributed at Frequent Intervals in the Chinese Hamster Dihydrofolate Reductase Origin of Replication but Are Used with Very Different Efficiencies von Dijkwel, Pieter A., Wang, Shuntai, Hamlin, Joyce L.

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Integrity of chromatin and replicating DNA in nuclei released from fission yeast by semi-automated grinding in liquid nitrogen von Givens, Robert M, Mesner, Larry D, Hamlin, Joyce L, Buck, Michael J, Huberman, Joel A

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Chromatin decondensation in S-phase involves recruitment of Cdk2 by Cdc45 and histone H1 phosphorylation von Alexandrow, Mark G, Hamlin, Joyce L

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Isolation of Restriction Fragments Containing Origins of Replication from Complex Genomes von Mesner, Larry D., Hamlin, Joyce L.

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Attachment to the Nuclear Matrix Mediates Specific Alterations in Chromatin Structure von Pemov, Alexander, Bavykin, Sergei, Hamlin, Joyce L.

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Purification of Restriction Fragments Containing Replication Intermediates from Complex Genomes for 2-D Gel Analysis von Mesner, Larry D., Dijkwel, Pieter A., Hamlin, Joyce L.

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winding road to origin discovery von Hamlin, Joyce L, Mesner, Larry D, Dijkwel, Pieter A

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A Potential Role for Mini-chromosome Maintenance (MCM) Proteins in Initiation at the Dihydrofolate Reductase Replication Origin von Alexandrow, Mark G., Ritzi, Marion, Pemov, Alexander, Hamlin, Joyce L.

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Cloning and characterization of Chinese hamster p53 cDNA von Lee, Hoyun, Larner, James M, Hamlin, Joyce L

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A p53-Independent Damage-Sensing Mechanism that Functions as a Checkpoint at the G1/S Transition in Chinese Hamster Ovary Cells von Lee, Hoyun, Larner, James M., Hamlin, Joyce L.

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Specific signals at the 3' end of the DHFR gene define one boundary of the downstream origin of replication von Mesner, Larry D, Hamlin, Joyce L

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The promoter of the Chinese hamster ovary dihydrofolate reductase gene regulates the activity of the local origin and helps define its boundaries von Saha, Swati, Shan, Yujie, Mesner, Larry D, Hamlin, Joyce L

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