Detecting overlapping protein complexes in protein-protein interaction networks von Nepusz, Tamás, Yu, Haiyuan, Paccanaro, Alberto

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Genomic Analysis of the Hierarchical Structure of Regulatory Networks von Yu, Haiyuan, Gerstein, Mark

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Three-dimensional reconstruction of protein networks provides insight into human genetic disease von Wang, Xiujuan, Wei, Xiaomu, Thijssen, Bram, Das, Jishnu, Lipkin, Steven M, Yu, Haiyuan

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Leveraging genetic interactions for adverse drug-drug interaction prediction von Qian, Sheng, Liang, Siqi, Yu, Haiyuan

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Propionibacterium acnes related anti-inflammation and skin hydration activities of madecassoside, a pentacyclic triterpene saponin from Centella asiatica von Shen, Xueqing, Guo, Miaomiao, Yu, Haiyuan, Liu, Dan, Lu, Zhi, Lu, Yanhua

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In-depth and 3-dimensional exploration of the budding yeast phosphoproteome von Lanz, Michael C, Yugandhar, Kumar, Gupta, Shagun, Sanford, Ethan J, Faça, Vitor M, Vega, Stephanie, Joiner, Aaron M N, Fromme, J Christopher, Yu, Haiyuan, Smolka, Marcus B

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Human MLH1/3 variants causing aneuploidy, pregnancy loss, and premature reproductive aging von Singh, Priti, Fragoza, Robert, Blengini, Cecilia S., Tran, Tina N., Pannafino, Gianno, Al-Sweel, Najla, Schimenti, Kerry J., Schindler, Karen, Alani, Eric A., Yu, Haiyuan, Schimenti, John C.

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The importance of bottlenecks in protein networks: correlation with gene essentiality and expression dynamics von Yu, Haiyuan, Kim, Philip M, Sprecher, Emmett, Trifonov, Valery, Gerstein, Mark

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INstruct: a database of high-quality 3D structurally resolved protein interactome networks von Meyer, Michael J, Das, Jishnu, Wang, Xiujuan, Yu, Haiyuan

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Network medicine links SARS-CoV-2/COVID-19 infection to brain microvascular injury and neuroinflammation in dementia-like cognitive impairment von Zhou, Yadi, Xu, Jielin, Hou, Yuan, Leverenz, James B, Kallianpur, Asha, Mehra, Reena, Liu, Yunlong, Yu, Haiyuan, Pieper, Andrew A, Jehi, Lara, Cheng, Feixiong

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Transcription imparts architecture, function and logic to enhancer units von Tippens, Nathaniel D., Liang, Jin, Leung, Alden King-Yung, Wierbowski, Shayne D., Ozer, Abdullah, Booth, James G., Lis, John T., Yu, Haiyuan

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A 3D structural SARS-CoV-2–human interactome to explore genetic and drug perturbations von Wierbowski, Shayne D., Liang, Siqi, Liu, Yuan, Chen, You, Gupta, Shagun, Andre, Nicole M., Lipkin, Steven M., Whittaker, Gary R., Yu, Haiyuan

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CART cell therapy for prostate cancer: status and promise von Yu, Haiyuan, Pan, Jun, Guo, Zhicheng, Yang, Chunhua, Mao, Lijun

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Disease Model of GATA4 Mutation Reveals Transcription Factor Cooperativity in Human Cardiogenesis von Ang, Yen-Sin, Rivas, Renee N., Ribeiro, Alexandre J.S., Srivas, Rohith, Rivera, Janell, Stone, Nicole R., Pratt, Karishma, Mohamed, Tamer M.A., Fu, Ji-Dong, Spencer, C. Ian, Tippens, Nathaniel D., Li, Molong, Narasimha, Anil, Radzinsky, Ethan, Moon-Grady, Anita J., Yu, Haiyuan, Pruitt, Beth L., Snyder, Michael P., Srivastava, Deepak

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Structure-based validation can drastically underestimate error rate in proteome-wide cross-linking mass spectrometry studies von Yugandhar, Kumar, Wang, Ting-Yi, Wierbowski, Shayne D., Shayhidin, Elnur Elyar, Yu, Haiyuan

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Phosphoribosyl modification of poly-ubiquitin chains at the Legionella-containing vacuole prohibiting autophagy adaptor recognition von Wan, Min, Minelli, Marena E., Zhao, Qiuye, Marshall, Shannon, Yu, Haiyuan, Smolka, Marcus, Mao, Yuxin

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Trimethylation of Lys36 on H3 restricts gene expression change during aging and impacts life span von Pu, Mintie, Ni, Zhuoyu, Wang, Minghui, Wang, Xiujuan, Wood, Jason G, Helfand, Stephen L, Yu, Haiyuan, Lee, Siu Sylvia

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Genome-scale analysis of interaction dynamics reveals organization of biological networks von DAS, Jishnu, MOHAMMED, Jaaved, HAIYUAN YU

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Inferring Protein-Protein Interaction Networks From Mass Spectrometry-Based Proteomic Approaches: A Mini-Review von Yugandhar, Kumar, Gupta, Shagun, Yu, Haiyuan

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Enhancement of anti-acne effect of Scutellaria baicalensis extract by fermentation with symbiotic fungus Penicillium decumbens von Zhu, Xiaojing, Mao, Yue, Guo, Miaomiao, Yu, Haiyuan, Hao, Liling, Hua, Qiang, Lu, Zhi, Hong, Minhua, An, Faliang

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