Genomic methods in profiling DNA accessibility and factor localization von Klein, David C., Hainer, Sarah J.

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High-Resolution Mapping of Chromatin Packaging in Mouse Embryonic Stem Cells and Sperm von Carone, Benjamin R., Hung, Jui-Hung, Hainer, Sarah J., Chou, Min-Te, Carone, Dawn M., Weng, Zhiping, Fazzio, Thomas G., Rando, Oliver J.

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Profiling of Pluripotency Factors in Single Cells and Early Embryos von Hainer, Sarah J., Bošković, Ana, McCannell, Kurtis N., Rando, Oliver J., Fazzio, Thomas G.

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Modeling methyl-sensitive transcription factor motifs with an expanded epigenetic alphabet von Viner, Coby, Ishak, Charles A, Johnson, James, Walker, Nicolas J, Shi, Hui, Sjöberg-Herrera, Marcela K, Shen, Shu Yi, Lardo, Santana M, Adams, David J, Ferguson-Smith, Anne C, De Carvalho, Daniel D, Hainer, Sarah J, Bailey, Timothy L, Hoffman, Michael M

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Specialized RSC: Substrate Specificities for a Conserved Chromatin Remodeler von Hainer, Sarah J., Kaplan, Craig D.

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Super-resolution imaging reveals the evolution of higher-order chromatin folding in early carcinogenesis von Xu, Jianquan, Ma, Hongqiang, Ma, Hongbin, Jiang, Wei, Mela, Christopher A., Duan, Meihan, Zhao, Shimei, Gao, Chenxi, Hahm, Eun-Ryeong, Lardo, Santana M., Troy, Kris, Sun, Ming, Pai, Reet, Stolz, Donna B., Zhang, Lin, Singh, Shivendra, Brand, Randall E., Hartman, Douglas J., Hu, Jing, Hainer, Sarah J., Liu, Yang

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Correction: The esBAF and ISWI nucleosome remodeling complexes influence occupancy of overlapping dinucleosomes and fragile nucleosomes in murine embryonic stem cells von Klein, David C, Troy, Kris, Tripplehorn, Sarah A, Hainer, Sarah J

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The esBAF and ISWI nucleosome remodeling complexes influence occupancy of overlapping dinucleosomes and fragile nucleosomes in murine embryonic stem cells von Klein, David C, Troy, Kris, Tripplehorn, Sarah A, Hainer, Sarah J

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FACT regulates pluripotency through proximal and distal regulation of gene expression in murine embryonic stem cells von Klein, David C, Lardo, Santana M, McCannell, Kurtis N, Hainer, Sarah J

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Non-Coding RNAs and Nucleosome Remodeling Complexes: An Intricate Regulatory Relationship von Patty, Benjamin J., Hainer, Sarah J.

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Suppression of pervasive noncoding transcription in embryonic stem cells by esBAF von Hainer, Sarah J, Gu, Weifeng, Carone, Benjamin R, Landry, Benjamin D, Rando, Oliver J, Mello, Craig C, Fazzio, Thomas G

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Intergenic transcription causes repression by directing nucleosome assembly von Hainer, Sarah J, Pruneski, Justin A, Mitchell, Rachel D, Monteverde, Robin M, Martens, Joseph A

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H3.3K122A results in a neomorphic phenotype in mouse embryonic stem cells von Patty, Benjamin J, Jordan, Cailin, Lardo, Santana M, Troy, Kris, Hainer, Sarah J

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Regulation of Nucleosome Architecture and Factor Binding Revealed by Nuclease Footprinting of the ESC Genome von Hainer, Sarah J., Fazzio, Thomas G.

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HIRA protects telomeres against R-loop-induced instability in ALT cancer cells von Lynskey, Michelle Lee, Brown, Emily E., Bhargava, Ragini, Wondisford, Anne R., Ouriou, Jean-Baptiste, Freund, Oliver, Bowman, Ray W., Smith, Baylee A., Lardo, Santana M., Schamus-Hayes, Sandra, Hainer, Sarah J., O’Sullivan, Roderick J.

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Identification of Histone Mutants That Are Defective for Transcription-Coupled Nucleosome Occupancy von Hainer, Sarah J., Martens, Joseph A.

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Exposure to candesartan during the first trimester of pregnancy in type 1 diabetes: experience from the placebo-controlled diabetic retinopathy candesartan trials von Porta, M., Hainer, J. W., Jansson, S.-O., Malm, A., Bilous, R., Chaturvedi, N., Fuller, J. H., Klein, R., Orchard, T., Parving, H.-H., Sjølie, A.-K.

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KAT-Independent Gene Regulation by Tip60 Promotes ESC Self-Renewal but Not Pluripotency von Acharya, Diwash, Hainer, Sarah J., Yoon, Yeonsoo, Wang, Feng, Bach, Ingolf, Rivera-Pérez, Jaime A., Fazzio, Thomas G.

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Transcription factor chromatin profiling genome-wide using uliCUT&RUN in single cells and individual blastocysts von Patty, Benjamin J., Hainer, Sarah J.

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The mitochondrial Cu + transporter PiC2 (SLC25A3) is a target of MTF1 and contributes to the development of skeletal muscle in vitro von McCann, Cat, Quinteros, Michael, Adelugba, Ifeoluwa, Morgada, Marcos N, Castelblanco, Aida R, Davis, Emily J, Lanzirotti, Antonio, Hainer, Sarah J, Vila, Alejandro J, Navea, Juan G, Padilla-Benavides, Teresita

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