A core human microbiome as viewed through 16S rRNA sequence clusters von Huse, Susan M, Ye, Yuzhen, Zhou, Yanjiao, Fodor, Anthony A

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A method for studying protistan diversity using massively parallel sequencing of V9 hypervariable regions of small-subunit ribosomal RNA genes von Amaral-Zettler, Linda A, McCliment, Elizabeth A, Ducklow, Hugh W, Huse, Susan M

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Global patterns of bacterial beta-diversity in seafloor and seawater ecosystems von Zinger, Lucie, Amaral-Zettler, Linda A, Fuhrman, Jed A, Horner-Devine, M Claire, Huse, Susan M, Welch, David B Mark, Martiny, Jennifer B H, Sogin, Mitchell, Boetius, Antje, Ramette, Alban

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Defining the healthy "core microbiome" of oral microbial communities von Zaura, Egija, Keijser, Bart J F, Huse, Susan M, Crielaard, Wim

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Exploring microbial diversity and taxonomy using SSU rRNA hypervariable tag sequencing von Huse, Susan M, Dethlefsen, Les, Huber, Julie A, Mark Welch, David, Welch, David Mark, Relman, David A, Sogin, Mitchell L

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Ironing out the wrinkles in the rare biosphere through improved OTU clustering von Huse, Susan M., Welch, David Mark, Morrison, Hilary G., Sogin, Mitchell L.

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Oligotyping analysis of the human oral microbiome von Eren, A Murat, Borisy, Gary G, Huse, Susan M, Mark Welch, Jessica L

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Diversity and population structure of sewage-derived microorganisms in wastewater treatment plant influent von McLellan, S.L, Huse, S.M, Mueller-Spitz, S.R, Andreishcheva, E.N, Sogin, M.L

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MCF-7 Human Breast Cancer Cells Form Differentiated Microtissues in Scaffold-Free Hydrogels von Vantangoli, Marguerite M, Madnick, Samantha J, Huse, Susan M, Weston, Paula, Boekelheide, Kim

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Accuracy and quality of massively parallel DNA pyrosequencing von Huse, Susan M, Huber, Julie A, Morrison, Hilary G, Sogin, Mitchell L, Welch, David Mark

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VAMPS: a website for visualization and analysis of microbial population structures von Huse, Susan M, Mark Welch, David B, Voorhis, Andy, Shipunova, Anna, Morrison, Hilary G, Eren, A Murat, Sogin, Mitchell L

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Community Structures of Fecal Bacteria in Cattle from Different Animal Feeding Operations von SHANKS, Orin C, KELTY, Catherine A, ARCHIBEQUE, Shawn, JENKINS, Michael, NEWTON, Ryan J, MCLELLAN, Sandra L, HUSE, Susan M, SOGIN, Mitchell L

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Reproducible Community Dynamics of the Gastrointestinal Microbiota following Antibiotic Perturbation von ANTONOPOULOS, Dionysios A, HUSE, Susan M, MORRISON, Hilary G, SCHMIDT, Thomas M, SOGIN, Mitchell L, YOUNG, Vincent B

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Microbial Diversity in the Deep Sea and the Underexplored "Rare Biosphere" von Sogin, Mitchell L., Morrison, Hilary G., Huber, Julie A., Welch, David Mark, Huse, Susan M., Neal, Phillip R., Arrieta, Jesus M., Herndl, Gerhard J.

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Pyrosequencing analysis of the Oral Microflora of healthy adults von Keijser, B.J.F., Zaura, E., Huse, S.M., van der Vossen, J.M.B.M., Schuren, F.H.J., Montijn, R.C., ten Cate, J.M., Crielaard, W.

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Acinetobacter, Aeromonas and Trichococcus populations dominate the microbial community within urban sewer infrastructure von VandeWalle, J. L., Goetz, G. W., Huse, S. M., Morrison, H. G., Sogin, M. L., Hoffmann, R. G., Yan, K., McLellan, S. L.

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Comparison of the Microbial Community Structures of Untreated Wastewaters from Different Geographic Locales von SHANKS, Orin C, NEWTON, Ryan J, KELTY, Catherine A, HUSE, Susan M, SOGIN, Mitchell L, MCLELLAN, Sandra L

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Shifts in the microbial community composition of Gulf Coast beaches following beach oiling von Newton, Ryan J, Huse, Susan M, Morrison, Hilary G, Peake, Colin S, Sogin, Mitchell L, McLellan, Sandra L

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Microbial Population Structures in the Deep Marine Biosphere von Huber, Julie A, Welch, David B. Mark, Morrison, Hilary G, Huse, Susan M, Neal, Phillip R, Butterfield, David A, Sogin, Mitchell L

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Subsampled open-reference clustering creates consistent, comprehensive OTU definitions and scales to billions of sequences von Rideout, Jai Ram, He, Yan, Navas-Molina, Jose A, Walters, William A, Ursell, Luke K, Gibbons, Sean M, Chase, John, McDonald, Daniel, Gonzalez, Antonio, Robbins-Pianka, Adam, Clemente, Jose C, Gilbert, Jack A, Huse, Susan M, Zhou, Hong-Wei, Knight, Rob, Caporaso, J Gregory

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