Structure-based prediction of ligand–protein interactions on a genome-wide scale von Hwang, Howook, Dey, Fabian, Petrey, Donald, Honig, Barry

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Acetylation-regulated interaction between p53 and SET reveals a widespread regulatory mode von Wang, Donglai, Kon, Ning, Lasso, Gorka, Jiang, Le, Leng, Wenchuan, Zhu, Wei-Guo, Qin, Jun, Honig, Barry, Gu, Wei

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Thinking outside the cell: how cadherins drive adhesion von Brasch, Julia, Harrison, Oliver J, Honig, Barry, Shapiro, Lawrence

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On the nature of cavities on protein surfaces: Application to the identification of drug-binding sites von Nayal, Murad, Honig, Barry

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PrePPI: a structure-informed database of protein-protein interactions von Zhang, Qiangfeng Cliff, Petrey, Donald, Garzón, José Ignacio, Deng, Lei, Honig, Barry

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The role of DNA shape in protein–DNA recognition von Rohs, Remo, West, Sean M., Sosinsky, Alona, Liu, Peng, Mann, Richard S., Honig, Barry

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A Structure-Informed Atlas of Human-Virus Interactions von Lasso, Gorka, Mayer, Sandra V., Winkelmann, Evandro R., Chu, Tim, Elliot, Oliver, Patino-Galindo, Juan Angel, Park, Kernyu, Rabadan, Raul, Honig, Barry, Shapira, Sagi D.

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Structural basis of adhesive binding by desmocollins and desmogleins von Harrison, Oliver J., Brasch, Julia, Lasso, Gorka, Katsamba, Phinikoula S., Ahlsen, Goran, Honig, Barry, Shapiro, Lawrence

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Structure-based prediction of protein–protein interactions on a genome-wide scale von Zhang, Qiangfeng Cliff, Petrey, Donald, Deng, Lei, Qiang, Li, Shi, Yu, Thu, Chan Aye, Bisikirska, Brygida, Lefebvre, Celine, Accili, Domenico, Hunter, Tony, Maniatis, Tom, Califano, Andrea, Honig, Barry

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Origins of specificity in protein-DNA recognition von Rohs, Remo, Jin, Xiangshu, West, Sean M, Joshi, Rohit, Honig, Barry, Mann, Richard S

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Structural Bioinformatics of the Interactome von Petrey, Donald, Honig, Barry

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Protein interface conservation across structure space von Zhang, Qiangfeng Cliff, Petrey, Donald, Norel, Raquel, Honig, Barry H

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Mechanism for alternating access in neurotransmitter transporters von Forrest, Lucy R, Zhang, Yuan-Wei, Jacobs, Miriam T, Gesmonde, Joan, Xie, Li, Honig, Barry H, Rudnick, Gary

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Cooperativity between trans and cis interactions in cadherin-mediated junction formation von Wu, Yinghao, Jin, Xiangshu, Harrison, Oliver, Shapiro, Lawrence, Honig, Barry H., Ben-Shaul, Avinoam

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Cofactor Binding Evokes Latent Differences in DNA Binding Specificity between Hox Proteins von Slattery, Matthew, Riley, Todd, Liu, Peng, Abe, Namiko, Gomez-Alcala, Pilar, Dror, Iris, Zhou, Tianyin, Rohs, Remo, Honig, Barry, Bussemaker, Harmen J., Mann, Richard S.

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Adhesion Protein Structure, Molecular Affinities, and Principles of Cell-Cell Recognition von Honig, Barry, Shapiro, Lawrence

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Visualization of clustered protocadherin neuronal self-recognition complexes von Brasch, Julia, Goodman, Kerry M., Noble, Alex J., Rapp, Micah, Mannepalli, Seetha, Bahna, Fabiana, Dandey, Venkata P., Bepler, Tristan, Berger, Bonnie, Maniatis, Tom, Potter, Clinton S., Carragher, Bridget, Honig, Barry, Shapiro, Lawrence

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Molecular Logic of Neuronal Self-Recognition through Protocadherin Domain Interactions von Rubinstein, Rotem, Thu, Chan Aye, Goodman, Kerry Marie, Wolcott, Holly Noelle, Bahna, Fabiana, Mannepalli, Seetha, Ahlsen, Goran, Chevee, Maxime, Halim, Adnan, Clausen, Henrik, Maniatis, Tom, Shapiro, Lawrence, Honig, Barry

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Discovery of an O-mannosylation pathway selectively serving cadherins and protocadherins von Larsen, Ida Signe Bohse, Narimatsu, Yoshiki, Joshi, Hiren Jitendra, Siukstaite, Lina, Harrison, Oliver J., Brasch, Julia, Goodman, Kerry M., Hansen, Lars, Shapiro, Lawrence, Honig, Barry, Vakhrushev, Sergey Y., Clausen, Henrik, Halim, Adnan

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Structural origins of clustered protocadherin-mediated neuronal barcoding von Rubinstein, Rotem, Goodman, Kerry Marie, Maniatis, Tom, Shapiro, Lawrence, Honig, Barry

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