Clustal Omega for making accurate alignments of many protein sequences von Sievers, Fabian, Higgins, Desmond G.

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Clustal Omega von Sievers, Fabian, Higgins, Desmond G.

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Fast, scalable generation of high‐quality protein multiple sequence alignments using Clustal Omega von Sievers, Fabian, Wilm, Andreas, Dineen, David, Gibson, Toby J, Karplus, Kevin, Li, Weizhong, Lopez, Rodrigo, McWilliam, Hamish, Remmert, Michael, Söding, Johannes, Thompson, Julie D, Higgins, Desmond G

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Identification of fungi in shotgun metagenomics datasets von Donovan, Paul D, Gonzalez, Gabriel, Higgins, Desmond G, Butler, Geraldine, Ito, Kimihito

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Protein multiple sequence alignment benchmarking through secondary structure prediction von Le, Quan, Sievers, Fabian, Higgins, Desmond G

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The Birth and Death of Olfactory Receptor Gene Families in Mammalian Niche Adaptation von Hughes, Graham M, Boston, Emma S M, Finarelli, John A, Murphy, William J, Higgins, Desmond G, Teeling, Emma C

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The Clustal Omega Multiple Alignment Package von Sievers, Fabian, Higgins, Desmond G.

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Comparison and evaluation of methods for generating differentially expressed gene lists from microarray data von Jeffery, Ian B, Higgins, Desmond G, Culhane, Aedín C

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Simple chained guide trees give high-quality protein multiple sequence alignments von Boyce, Kieran, Sievers, Fabian, Higgins, Desmond G.

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Comparative phenotypic analysis of the major fungal pathogens Candida parapsilosis and Candida albicans von Holland, Linda M, Schröder, Markus S, Turner, Siobhán A, Taff, Heather, Andes, David, Grózer, Zsuzsanna, Gácser, Attila, Ames, Lauren, Haynes, Ken, Higgins, Desmond G, Butler, Geraldine

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Multiple Origins of the Pathogenic Yeast Candida orthopsilosis by Separate Hybridizations between Two Parental Species von Schröder, Markus S, Martinez de San Vicente, Kontxi, Prandini, Tâmara H R, Hammel, Stephen, Higgins, Desmond G, Bagagli, Eduardo, Wolfe, Kenneth H, Butler, Geraldine

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GSK3 inhibitors regulate MYCN mRNA levels and reduce neuroblastoma cell viability through multiple mechanisms, including p53 and Wnt signaling von Duffy, David J, Krstic, Aleksandar, Schwarzl, Thomas, Higgins, Desmond G, Kolch, Walter

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TPP riboswitch-dependent regulation of an ancient thiamin transporter in Candida von Donovan, Paul D, Holland, Linda M, Lombardi, Lisa, Coughlan, Aisling Y, Higgins, Desmond G, Wolfe, Kenneth H, Butler, Geraldine

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Using de novo protein structure predictions to measure the quality of very large multiple sequence alignments von Fox, Gearóid, Sievers, Fabian, Higgins, Desmond G

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Making automated multiple alignments of very large numbers of protein sequences von Sievers, Fabian, Dineen, David, Wilm, Andreas, Higgins, Desmond G

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3DCoffee: Combining Protein Sequences and Structures within Multiple Sequence Alignments von O'Sullivan, Orla, Suhre, Karsten, Abergel, Chantal, Higgins, Desmond G, Notredame, Cédric

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Transcriptional profiling of early differentiation of primary human mesenchymal stem cells into chondrocytes von Schwarzl, Thomas, Keogh, Andrea, Shaw, Georgina, Krstic, Aleksandar, Clayton, Elizabeth, Higgins, Desmond G., Kolch, Walter, Barry, Frank

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Hepatitis B virus subgenotyping: History, effects of recombination, misclassifications, and corrections von Shi, Weifeng, Zhang, Zhong, Ling, Cheng, Zheng, Weimin, Zhu, Chaodong, Carr, Michael J., Higgins, Desmond G.

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The copper regulon of the human fungal pathogen Cryptococcus neoformans H99 von Ding, Chen, Yin, Jun, Tovar, Edgar Mauricio Medina, Fitzpatrick, David A., Higgins, Desmond G., Thiele, Dennis J.

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Regulation of the Hypoxic Response in Candida albicans von Synnott, John M., Guida, Alessandro, Mulhern-Haughey, Siobhan, Higgins, Desmond G., Butler, Geraldine

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