A Recently Evolved Transcriptional Network Controls Biofilm Development in Candida albicans von Nobile, Clarissa J., Fox, Emily P., Nett, Jeniel E., Sorrells, Trevor R., Mitrovich, Quinn M., Hernday, Aaron D., Tuch, Brian B., Andes, David R., Johnson, Alexander D.

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Inferring gene regulatory networks using transcriptional profiles as dynamical attractors von Li, Ruihao, Rozum, Jordan C, Quail, Morgan M, Qasim, Mohammad N, Sindi, Suzanne S, Nobile, Clarissa J, Albert, Réka, Hernday, Aaron D

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Efficient Multiplexed Integration of Synergistic Alleles and Metabolic Pathways in Yeasts via CRISPR-Cas von Horwitz, Andrew A., Walter, Jessica M., Schubert, Max G., Kung, Stephanie H., Hawkins, Kristy, Platt, Darren M., Hernday, Aaron D., Mahatdejkul-Meadows, Tina, Szeto, Wayne, Chandran, Sunil S., Newman, Jack D.

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Biofilm matrix regulation by Candida albicans Zap1 von Nobile, Clarissa J, Nett, Jeniel E, Hernday, Aaron D, Homann, Oliver R, Deneault, Jean-Sebastien, Nantel, Andre, Andes, David R, Johnson, Alexander D, Mitchell, Aaron P

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Candida albicans white and opaque cells undergo distinct programs of filamentous growth von Si, Haoyu, Hernday, Aaron D, Hirakawa, Matthew P, Johnson, Alexander D, Bennett, Richard J

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The evolution of combinatorial gene regulation in fungi von Tuch, Brian B, Galgoczy, David J, Hernday, Aaron D, Li, Hao, Johnson, Alexander D

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The transcriptomes of two heritable cell types illuminate the circuit governing their differentiation von Tuch, Brian B, Mitrovich, Quinn M, Homann, Oliver R, Hernday, Aaron D, Monighetti, Cinna K, De La Vega, Francisco M, Johnson, Alexander D

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Transcriptional Circuits Regulating Developmental Processes in Candida albicans von Rodriguez, Diana L, Quail, Morgan M, Hernday, Aaron D, Nobile, Clarissa J

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White-opaque switching in natural MTLa/α isolates of Candida albicans: evolutionary implications for roles in host adaptation, pathogenesis, and sex von Xie, Jing, Tao, Li, Nobile, Clarissa J, Tong, Yaojun, Guan, Guobo, Sun, Yuan, Cao, Chengjun, Hernday, Aaron D, Johnson, Alexander D, Zhang, Lixin, Bai, Feng-Yan, Huang, Guanghua

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A Markerless CRISPR-Mediated System for Genome Editing in Candida auris Reveals a Conserved Role for Cas5 in the Caspofungin Response von Ennis, Craig L, Hernday, Aaron D, Nobile, Clarissa J

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An Efficient, Rapid, and Recyclable System for CRISPR-Mediated Genome Editing in Candida albicans von Nguyen, Namkha, Quail, Morgan M F, Hernday, Aaron D

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Transcriptional control of hyphal morphogenesis in Candida albicans von Villa, Sonia, Hamideh, Mohammad, Weinstock, Anthony, Qasim, Mohammad N, Hazbun, Tony R, Sellam, Adnane, Hernday, Aaron D, Thangamani, Shankar

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Contact-Dependent Inhibition of Growth in Escherichia coli von Aoki, Stephanie K, Pamma, Rupinderjit, Hernday, Aaron D, Bickham, Jessica E, Braaten, Bruce A, Low, David A

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Structure of the transcriptional network controlling white‐opaque switching in Candida albicans von Hernday, Aaron D., Lohse, Matthew B., Fordyce, Polly M., Nobile, Clarissa J., DeRisi, Joseph L., Johnson, Alexander D.

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The bacillithiol pathway is required for biofilm formation in Staphylococcus aureus von Gulati, Megha, Thomas, Jason M., Ennis, Craig L., Hernday, Aaron D., Rawat, Mamta, Nobile, Clarissa J.

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Identification and characterization of a previously undescribed family of sequence-specific DNA-binding domains von Lohse, Matthew B., Hernday, Aaron D., Fordyce, Polly M., Noiman, Liron, Sorrells, Trevor R., Hanson-Smith, Victor, Nobile, Clarissa J., DeRisi, Joseph L., Johnson, Alexander D.

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Directed Differentiation of Human Pluripotent Stem Cells to Podocytes under Defined Conditions von Qian, Tongcheng, Hernday, Shaenah E., Bao, Xiaoping, Olson, William R., Panzer, Sarah E., Shusta, Eric V., Palecek, Sean P.

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AddTag, a two-step approach with supporting software package that facilitates CRISPR/Cas-mediated precision genome editing von Seher, Thaddeus D, Nguyen, Namkha, Ramos, Diana, Bapat, Priyanka, Nobile, Clarissa J, Sindi, Suzanne S, Hernday, Aaron D

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N-Acetylglucosamine (GlcNAc) Sensing, Utilization, and Functions in Candida albicans von Du, Han, Ennis, Craig L, Hernday, Aaron D, Nobile, Clarissa J, Huang, Guanghua

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Ssn6 Defines a New Level of Regulation of White-Opaque Switching in Candida albicans and Is Required For the Stochasticity of the Switch von Hernday, Aaron D, Lohse, Matthew B, Nobile, Clarissa J, Noiman, Liron, Laksana, Clement N, Johnson, Alexander D

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