PRODRG, a program for generating molecular topologies and unique molecular descriptors from coordinates of small molecules von van Aalten, D M, Bywater, R, Findlay, J B, Hendlich, M, Hooft, R W, Vriend, G

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Knowledge-based scoring function to predict protein-ligand interactions von Gohlke, Holger, Hendlich, Manfred, Klebe, Gerhard

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Relibase: Design and Development of a Database for Comprehensive Analysis of Protein–Ligand Interactions von Hendlich, Manfred, Bergner, Andreas, Günther, Judith, Klebe, Gerhard

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Databases for Protein-Ligand Complexes von Hendlich, Manfred

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LIGSITE: automatic and efficient detection of potential small molecule-binding sites in proteins von Hendlich, Manfred, Rippmann, Friedrich, Barnickel, Gerhard

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Utilising Structural Knowledge in Drug Design Strategies: Applications Using Relibase von Günther, Judith, Bergner, Andreas, Hendlich, Manfred, Klebe, Gerhard

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From Structure to Function: A New Approach to Detect Functional Similarity among Proteins Independent from Sequence and Fold Homology von Schmitt, Stefan, Hendlich, Manfred, Klebe, Gerhard

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Assembly of polypeptide and protein backbone conformations from low energy ensembles of short fragments: development of strategies and construction of models for myoglobin, lysozym... von Sippl, M J, Hendlich, M, Lackner, P

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BALI:  Automatic Assignment of Bond and Atom Types for Protein Ligands in the Brookhaven Protein Databank von Hendlich, M, Rippmann, F, Barnickel, G

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Use of Relibase for retrieving complex three-dimensional interaction patterns including crystallographic packing effects von Bergner, Andreas, Günther, Judith, Hendlich, Manfred, Klebe, Gerhard, Verdonk, Marcel

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Identification of native protein folds amongst a large number of incorrect models : the calculation of low energy conformations from potentials of mean force von HENDLICH, M, LACKNER, P, WEITCKUS, S, FLOECKNER, H, FROSCHAUER, R, GOTTSBACHER, K, CASARI, G, SIPPL, M. J

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Use of Relibase for Retrieving Complex Three-Dimensional Interaction Patterns Including Crystallographic Packing Effects von Bergner, A, Guenther, J, Hendlich, M, Klebe, G, Verdonk, M

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Assembly of polypeptide and protein backbone conformations from low energy ensembles of short fragments: Development of strategies and construction of models for myoglobin, lysozym... von Sippl, MJ, Hendlich, M, Lackner, P

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RELIBase – an object-oriented comprehensive receptor–ligand database von Hendlich, M., Rippmann, F., Barnickel, G., Hemm, K., Aberer, K.

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