Probing the evolution, ecology and physiology of marine protists using transcriptomics von Caron, David A., Alexander, Harriet, Allen, Andrew E., Archibald, John M., Armbrust, E. Virginia, Bachy, Charles, Bell, Callum J., Bharti, Arvind, Dyhrman, Sonya T., Guida, Stephanie M., Heidelberg, Karla B., Kaye, Jonathan Z., Metzner, Julia, Smith, Sarah R., Worden, Alexandra Z.

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A tale of two mixotrophic chrysophytes: Insights into the metabolisms of two Ochromonas species (Chrysophyceae) through a comparison of gene expression von Lie, Alle A Y, Liu, Zhenfeng, Terrado, Ramon, Tatters, Avery O, Heidelberg, Karla B, Caron, David A

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De novo metagenomic assembly reveals abundant novel major lineage of Archaea in hypersaline microbial communities von Narasingarao, Priya, Podell, Sheila, Ugalde, Juan A, Brochier-Armanet, Céline, Emerson, Joanne B, Brocks, Jochen J, Heidelberg, Karla B, Banfield, Jillian F, Allen, Eric E

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The Sorcerer II Global Ocean Sampling Expedition: metagenomic characterization of viruses within aquatic microbial samples von Williamson, Shannon J, Rusch, Douglas B, Yooseph, Shibu, Halpern, Aaron L, Heidelberg, Karla B, Glass, John I, Andrews-Pfannkoch, Cynthia, Fadrosh, Douglas, Miller, Christopher S, Sutton, Granger, Frazier, Marvin, Venter, J Craig

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Functional genomic signatures of sponge bacteria reveal unique and shared features of symbiosis von Thomas, Torsten, Rusch, Doug, DeMaere, Matt Z, Yung, Pui Yi, Lewis, Matt, Halpern, Aaron, Heidelberg, Karla B, Egan, Suhelen, Steinberg, Peter D, Kjelleberg, Staffan

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Assembly-driven community genomics of a hypersaline microbial ecosystem von Podell, Sheila, Ugalde, Juan A, Narasingarao, Priya, Banfield, Jillian F, Heidelberg, Karla B, Allen, Eric E

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Seasonal fluctuations in ionic concentrations drive microbial succession in a hypersaline lake community von Podell, Sheila, Emerson, Joanne B, Jones, Claudia M, Ugalde, Juan A, Welch, Sue, Heidelberg, Karla B, Banfield, Jillian F, Allen, Eric E

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Protists are microbes too: a perspective von Caron, David A, Worden, Alexandra Z, Countway, Peter D, Demir, Elif, Heidelberg, Karla B

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Dynamic Viral Populations in Hypersaline Systems as Revealed by Metagenomic Assembly von EMERSON, Joanne B, THOMAS, Brian C, ANDRADE, Karen, ALLEN, Eric E, HEIDELBERG, Karla B, BANFIELD, Jillian F

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New Approaches Indicate Constant Viral Diversity despite Shifts in Assemblage Structure in an Australian Hypersaline Lake von EMERSON, Joanne B, THOMAS, Brian C, ANDRADE, Karen, HEIDELBERG, Karla B, BANFIELD, Jillian F

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Characterization of eukaryotic microbial diversity in hypersaline Lake Tyrrell, Australia von Heidelberg, Karla B, Nelson, William C, Holm, Johanna B, Eisenkolb, Nadine, Andrade, Karen, Emerson, Joanne B

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Comparative Analysis of Eukaryotic Marine Microbial Assemblages from 18S rRNA Gene and Gene Transcript Clone Libraries by Using Different Methods of Extraction von KOID, Amy, NELSON, William C, MRAZ, Amy, HEIDELBERGA, Karla B

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Single-cell transcriptomics of small microbial eukaryotes: limitations and potential von Liu, Zhenfeng, Hu, Sarah K, Campbell, Victoria, Tatters, Avery O, Heidelberg, Karla B, Caron, David A

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Comparative transcriptome analysis of four prymnesiophyte algae von Koid, Amy E, Liu, Zhenfeng, Terrado, Ramon, Jones, Adriane C, Caron, David A, Heidelberg, Karla B

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Virus-Host and CRISPR Dynamics in Archaea-Dominated Hypersaline Lake Tyrrell, Victoria, Australia von Emerson, Joanne B., Andrade, Karen, Thomas, Brian C., Norman, Anders, Allen, Eric E., Heidelberg, Karla B., Banfield, Jillian F.

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Gene expression in the mixotrophic prymnesiophyte, Prymnesium parvum, responds to prey availability von Liu, Zhenfeng, Jones, Adriane C, Campbell, Victoria, Hambright, K David, Heidelberg, Karla B, Caron, David A

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Temporal profiling resolves the drivers of microbial nitrogen cycling variability in coastal sediments von Marshall, Alexis J., Phillips, Lori, Longmore, Andrew, Hayden, Helen L., Heidelberg, Karla B., Tang, Caixian, Mele, Pauline

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Single-Cell View of Carbon and Nitrogen Acquisition in the Mixotrophic Alga Prymnesium parvum (Haptophyta) Inferred From Stable Isotope Tracers and NanoSIMS von Carpenter, Kevin J., Bose, Maitrayee, Polerecky, Lubos, Lie, Alle A. Y., Heidelberg, Karla B., Caron, David A.

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Gene expression characterizes different nutritional strategies among three mixotrophic protists von Liu, Zhenfeng, Campbell, Victoria, Heidelberg, Karla B., Caron, David A.

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Comparative genomics of planktonic Flavobacteriaceae from the Gulf of Maine using metagenomic data von Tully, Benjamin J, Sachdeva, Rohan, Heidelberg, Karla B, Heidelberg, John F

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