The contribution of alu elements to mutagenic DNA double-strand break repair von Morales, Maria E, White, Travis B, Streva, Vincent A, DeFreece, Cecily B, Hedges, Dale J, Deininger, Prescott L

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Mammalian non-LTR retrotransposons: for better or worse, in sickness and in health von Belancio, Victoria P, Hedges, Dale J, Deininger, Prescott

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The genomic landscape of pediatric acute lymphoblastic leukemia von Brady, Samuel W., Roberts, Kathryn G., Gu, Zhaohui, Shi, Lei, Pounds, Stanley, Pei, Deqing, Cheng, Cheng, Dai, Yunfeng, Devidas, Meenakshi, Qu, Chunxu, Hill, Ashley N., Payne-Turner, Debbie, Ma, Xiaotu, Iacobucci, Ilaria, Baviskar, Pradyuamna, Wei, Lei, Arunachalam, Sasi, Hagiwara, Kohei, Liu, Yanling, Flasch, Diane A., Liu, Yu, Parker, Matthew, Chen, Xiaolong, Elsayed, Abdelrahman H., Pathak, Omkar, Li, Yongjin, Fan, Yiping, Michael, J. Robert, Rusch, Michael, Wilkinson, Mark R., Foy, Scott, Hedges, Dale J., Newman, Scott, Zhou, Xin, Wang, Jian, Reilly, Colleen, Sioson, Edgar, Rice, Stephen V., Pastor Loyola, Victor, Wu, Gang, Rampersaud, Evadnie, Reshmi, Shalini C., Gastier-Foster, Julie, Guidry Auvil, Jaime M., Gesuwan, Patee, Smith, Malcolm A., Winick, Naomi, Carroll, Andrew J., Heerema, Nyla A., Harvey, Richard C., Willman, Cheryl L., Larsen, Eric, Raetz, Elizabeth A., Borowitz, Michael J., Wood, Brent L., Carroll, William L., Zweidler-McKay, Patrick A., Rabin, Karen R., Mattano, Leonard A., Maloney, Kelly W., Winter, Stuart S., Burke, Michael J., Salzer, Wanda, Dunsmore, Kimberly P., Angiolillo, Anne L., Crews, Kristine R., Downing, James R., Jeha, Sima, Pui, Ching-Hon, Evans, William E., Yang, Jun J., Relling, Mary V., Gerhard, Daniela S., Loh, Mignon L., Hunger, Stephen P., Zhang, Jinghui, Mullighan, Charles G.

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Reconstructing the population genetic history of the Caribbean von Moreno-Estrada, Andrés, Gravel, Simon, Zakharia, Fouad, McCauley, Jacob L, Byrnes, Jake K, Gignoux, Christopher R, Ortiz-Tello, Patricia A, Martínez, Ricardo J, Hedges, Dale J, Morris, Richard W, Eng, Celeste, Sandoval, Karla, Acevedo-Acevedo, Suehelay, Norman, Paul J, Layrisse, Zulay, Parham, Peter, Martínez-Cruzado, Juan Carlos, Burchard, Esteban González, Cuccaro, Michael L, Martin, Eden R, Bustamante, Carlos D

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Methylation profiling reveals novel molecular classes of rhabdomyosarcoma von Clay, Michael R., Patel, Anand, Tran, Quynh, Hedges, Dale J., Chang, Ti-Cheng, Stewart, Elizabeth, Charville, Greg, Cline, Cynthia, Dyer, Michael A., Orr, Brent A.

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A comprehensive approach to expression of L1 loci von Deininger, Prescott, Morales, Maria E, White, Travis B, Baddoo, Melody, Hedges, Dale J, Servant, Geraldine, Srivastav, Sudesh, Smither, Madison E, Concha, Monica, DeHaro, Dawn L, Flemington, Erik K, Belancio, Victoria P

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Whole genome sequencing provides comprehensive genetic testing in childhood B-cell acute lymphoblastic leukaemia von Ryan, Sarra L., Peden, John F., Kingsbury, Zoya, Schwab, Claire J., James, Terena, Polonen, Petri, Mijuskovic, Martina, Becq, Jenn, Yim, Richard, Cranston, Ruth E., Hedges, Dale J., Roberts, Kathryn G., Mullighan, Charles G., Vora, Ajay, Russell, Lisa J., Bain, Robert, Moorman, Anthony V., Bentley, David R., Harrison, Christine J., Ross, Mark T.

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SVA Elements: A Hominid-specific Retroposon Family von Wang, Hui, Xing, Jinchuan, Grover, Deepak, Hedges, Dale J., Han, Kyudong, Walker, Jerilyn A., Batzer, Mark A.

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Genomic landscape of Down syndrome–associated acute lymphoblastic leukemia von Li, Zhenhua, Chang, Ti-Cheng, Junco, Jacob J., Devidas, Meenakshi, Li, Yizhen, Yang, Wenjian, Huang, Xin, Hedges, Dale J., Cheng, Zhongshan, Shago, Mary, Carroll, Andrew J., Heerema, Nyla A., Gastier-Foster, Julie, Wood, Brent L., Borowitz, Michael J., Sanclemente, Lauren, Raetz, Elizabeth A., Hunger, Stephen P., Feingold, Eleanor, Rosser, Tracie C., Sherman, Stephanie L., Loh, Mignon L., Mullighan, Charles G., Yu, Jiyang, Wu, Gang, Lupo, Philip J., Rabin, Karen R., Yang, Jun J.

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Correction: Linear Decay of Retrotransposon Antisense Bias across Genes Is Contingent upon Tissue Specificity von Linker, Sara, Hedges, Dale J

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Comparison of three targeted enrichment strategies on the SOLiD sequencing platform von Hedges, Dale J, Guettouche, Toumy, Yang, Shan, Bademci, Guney, Diaz, Ashley, Andersen, Ashley, Hulme, William F, Linker, Sara, Mehta, Arpit, Edwards, Yvonne J K, Beecham, Gary W, Martin, Eden R, Pericak-Vance, Margaret A, Zuchner, Stephan, Vance, Jeffery M, Gilbert, John R

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Whole-Genome Sequencing of the Akata and Mutu Epstein-Barr Virus Strains von Lin, Zhen, Wang, Xia, Strong, Michael J, Concha, Monica, Baddoo, Melody, Xu, Guorong, Baribault, Carl, Fewell, Claire, Hulme, William, Hedges, Dale, Taylor, Christopher M, Flemington, Erik K

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Exome Sequencing and Genome-Wide Linkage Analysis in 17 Families Illustrate the Complex Contribution of TTN Truncating Variants to Dilated Cardiomyopathy von Norton, Nadine, Li, Duanxiang, Rampersaud, Evadnie, Morales, Ana, Martin, Eden R, Zuchner, Stephan, Guo, Shengru, Gonzalez, Michael, Hedges, Dale J, Robertson, Peggy D, Krumm, Niklas, Nickerson, Deborah A, Hershberger, Ray E

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Pediatric Cancer Variant Pathogenicity Information Exchange (PeCanPIE): a cloud-based platform for curating and classifying germline variants von Edmonson, Michael N, Patel, Aman N, Hedges, Dale J, Wang, Zhaoming, Rampersaud, Evadnie, Kesserwan, Chimene A, Zhou, Xin, Liu, Yanling, Newman, Scott, Rusch, Michael C, McLeod, Clay L, Wilkinson, Mark R, Rice, Stephen V, Soussi, Thierry, Taylor, J Paul, Benatar, Michael, Becksfort, Jared B, Nichols, Kim E, Robison, Leslie L, Downing, James R, Zhang, Jinghui

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Rescuing Alu: recovery of new inserts shows LINE-1 preserves Alu activity through A-tail expansion von Wagstaff, Bradley J, Hedges, Dale J, Derbes, Rebecca S, Campos Sanchez, Rebeca, Chiaromonte, Francesca, Makova, Kateryna D, Roy-Engel, Astrid M

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Genomes for Kids: The Scope of Pathogenic Mutations in Pediatric Cancer Revealed by Comprehensive DNA and RNA Sequencing von Newman, Scott, Nakitandwe, Joy, Kesserwan, Chimene A, Azzato, Elizabeth M, Wheeler, David A, Rusch, Michael, Shurtleff, Sheila, Hedges, Dale J, Hamilton, Kayla V, Foy, Scott G, Edmonson, Michael N, Thrasher, Andrew, Bahrami, Armita, Orr, Brent A, Klco, Jeffery M, Gu, Jiali, Harrison, Lynn W, Wang, Lu, Clay, Michael R, Ouma, Annastasia, Silkov, Antonina, Liu, Yanling, Zhang, Zhaojie, Liu, Yu, Brady, Samuel W, Zhou, Xin, Chang, Ti-Cheng, Pande, Manjusha, Davis, Eric, Becksfort, Jared, Patel, Aman, Wilkinson, Mark R, Rahbarinia, Delaram, Kubal, Manish, Maciaszek, Jamie L, Pastor, Victor, Knight, Jay, Gout, Alexander M, Wang, Jian, Gu, Zhaohui, Mullighan, Charles G, McGee, Rose B, Quinn, Emily A, Nuccio, Regina, Mostafavi, Roya, Gerhardt, Elsie L, Taylor, Leslie M, Valdez, Jessica M, Hines-Dowell, Stacy J, Pappo, Alberto S, Robinson, Giles, Johnson, Liza-Marie, Pui, Ching-Hon, Ellison, David W, Downing, James R, Zhang, Jinghui, Nichols, Kim E

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Linear decay of retrotransposon antisense bias across genes is contingent upon tissue specificity von Linker, Sara, Hedges, Dale J

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Methylation at global LINE-1 repeats in human blood are affected by gender but not by age or natural hormone cycles von El-Maarri, Osman, Walier, Maja, Behne, Frank, van Üüm, Jan, Singer, Heike, Diaz-Lacava, Amalia, Nüsgen, Nicole, Niemann, Barbara, Watzka, Matthias, Reinsberg, Jochen, van der Ven, Hans, Wienker, Thomas, Stoffel-Wagner, Birgit, Schwaab, Rainer, Oldenburg, Johannes

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LINE-1 RNA splicing and influences on mammalian gene expression von Belancio, Victoria P., Hedges, Dale J., Deininger, Prescott

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Genetic Risk for Subsequent Neoplasms Among Long-Term Survivors of Childhood Cancer von Wang, Zhaoming, Wilson, Carmen L, Easton, John, Thrasher, Andrew, Mulder, Heather, Liu, Qi, Hedges, Dale J, Wang, Shuoguo, Rusch, Michael C, Edmonson, Michael N, Levy, Shawn, Lanctot, Jennifer Q, Caron, Eric, Shelton, Kyla, Currie, Kelsey, Lear, Matthew, Patel, Aman, Rosencrance, Celeste, Shao, Ying, Vadodaria, Bhavin, Yergeau, Donald, Sapkota, Yadav, Brooke, Russell J, Moon, Wonjong, Rampersaud, Evadnie, Ma, Xiaotu, Chang, Ti-Cheng, Rice, Stephen V, Pepper, Cynthia, Zhou, Xin, Chen, Xiang, Chen, Wenan, Jones, Angela, Boone, Braden, Ehrhardt, Matthew J, Krasin, Matthew J, Howell, Rebecca M, Phillips, Nicholas S, Lewis, Courtney, Srivastava, Deokumar, Pui, Ching-Hon, Kesserwan, Chimene A, Wu, Gang, Nichols, Kim E, Downing, James R, Hudson, Melissa M, Yasui, Yutaka, Robison, Leslie L, Zhang, Jinghui

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