Phenotypic and molecular characterization of the claudin-low intrinsic subtype of breast cancer von Prat, Aleix, Parker, Joel S, Karginova, Olga, Fan, Cheng, Livasy, Chad, Herschkowitz, Jason I, He, Xiaping, Perou, Charles M

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Identification of Differential Genes of DNA Methylation Associated With Alzheimer's Disease Based on Integrated Bioinformatics and Its Diagnostic Significance von Chen, Fan, Wang, Na, He, Xiaping

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Genomic analysis identifies unique signatures predictive of brain, lung, and liver relapse von Harrell, J. Chuck, Prat, Aleix, Parker, Joel S., Fan, Cheng, He, Xiaping, Carey, Lisa, Anders, Carey, Ewend, Matthew, Perou, Charles M.

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MapSplice: Accurate mapping of RNA-seq reads for splice junction discovery von Wang, Kai, Singh, Darshan, Zeng, Zheng, Coleman, Stephen J, Huang, Yan, Savich, Gleb L, He, Xiaping, Mieczkowski, Piotr, Grimm, Sara A, Perou, Charles M, MacLeod, James N, Chiang, Derek Y, Prins, Jan F, Liu, Jinze

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Characterization of cell lines derived from breast cancers and normal mammary tissues for the study of the intrinsic molecular subtypes von Prat, Aleix, Karginova, Olga, Parker, Joel S., Fan, Cheng, He, Xiaping, Bixby, Lisa, Harrell, J. Chuck, Roman, Erick, Adamo, Barbara, Troester, Melissa, Perou, Charles M.

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Supervised Risk Predictor of Breast Cancer Based on Intrinsic Subtypes von PARKER, Joel S, MULLINS, Michael, QUACKENBUSH, John F, STIJLEMAN, Inge J, PALAZZO, Juan, MARRON, J. S, NOBEL, Andrew B, MARDIS, Elaine, NIELSEN, Torsten O, ELLIS, Matthew J, PEROU, Charles M, BERNARD, Philip S, CHEANG, Maggie C. U, LEUNG, Samuel, VODUC, David, VICKERY, Tammi, DAVIES, Sherri, FAURON, Christiane, XIAPING HE, ZHIYUAN HU

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Residual breast cancers after conventional therapy display mesenchymal as well as tumor-initiating features von Creighton, Chad J, Li, Xiaoxian, Landis, Melissa, Dixon, J. Michael, Neumeister, Veronique M, Sjolund, Ashley, Rimm, David L, Wong, Helen, Rodriguez, Angel, Herschkowitz, Jason I, Fan, Cheng, Zhang, Xiaomei, He, Xiaping, Pavlick, Anne, Gutierrez, M. Carolina, Renshaw, Lorna, Larionov, Alexey A, Faratian, Dana, Hilsenbeck, Susan G, Perou, Charles M, Lewis, Michael T, Rosen, Jeffrey M, Chang, Jenny C

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Integrated RNA and DNA sequencing reveals early drivers of metastatic breast cancer von Siegel, Marni B, He, Xiaping, Hoadley, Katherine A, Hoyle, Alan, Pearce, Julia B, Garrett, Amy L, Kumar, Sunil, Moylan, Vincent J, Brady, Claudia M, Van Swearingen, Amanda Ed, Marron, David, Gupta, Gaorav P, Thorne, Leigh B, Kieran, Niamh, Livasy, Chad, Mardis, Elaine R, Parker, Joel S, Chen, Mengjie, Anders, Carey K, Carey, Lisa A, Perou, Charles M

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Characterization of a Naturally Occurring Breast Cancer Subset Enriched in Epithelial-to-Mesenchymal Transition and Stem Cell Characteristics von HENNESSY, Bryan T, GONZALEZ-ANGULO, Ana-Maria, WENBIN LIU, STIVERS, David, BAGGERLY, Keith, CAREY, Mark, LLUCH, Ana, MONTEAGUDO, Carlos, XIAPING HE, WEIGMAN, Victor, CHENG FAN, PALAZZO, Juan, STEMKE-HALE, Katherine, HORTOBAGYI, Gabriel N, NOLDEN, Laura K, WANG, Nicholas J, VALERO, Vicente, GRAY, Joe W, PEROU, Charles M, MILLS, Gordon B, GILCREASE, Michael Z, KRISHNAMURTHY, Savitri, LEE, Ju-Seog, FRIDLYAND, Jane, SAHIN, Aysegul, AGARWAL, Roshan, JOY, Corwin

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The potential diagnostic accuracy of urine formaldehyde levels in Alzheimer's disease: A systematic review and meta-analysis von Chen, Fan, Wang, Na, Tian, Xinyan, Qin, Yan, Su, Juan, He, Rongqiao, He, Xiaping

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The Protective Effect of Mangiferin on Formaldehyde-Induced HT22 Cell Damage and Cognitive Impairment von Chen, Fan, Wang, Na, Tian, Xinyan, Su, Juan, Qin, Yan, He, Rongqiao, He, Xiaping

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Correction: Chen et al. The Protective Effect of Mangiferin on Formaldehyde-Induced HT22 Cell Damage and Cognitive Impairment. Pharmaceutics 2023, 15, 1568 von Chen, Fan, Wang, Na, Tian, Xinyan, Su, Juan, Qin, Yan, He, Rongqiao, He, Xiaping

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Unlocking the transcriptomic potential of formalin-fixed paraffin embedded clinical tissues: comparison of gene expression profiling approaches von Turnbull, Arran K, Selli, Cigdem, Martinez-Perez, Carlos, Fernando, Anu, Renshaw, Lorna, Keys, Jane, Figueroa, Jonine D, He, Xiaping, Tanioka, Maki, Munro, Alison F, Murphy, Lee, Fawkes, Angie, Clark, Richard, Coutts, Audrey, Perou, Charles M, Carey, Lisa A, Dixon, J Michael, Sims, Andrew H

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Tumor Evolution in Two Patients with Basal-like Breast Cancer: A Retrospective Genomics Study of Multiple Metastases von Hoadley, Katherine A, Siegel, Marni B, Kanchi, Krishna L, Miller, Christopher A, Ding, Li, Zhao, Wei, He, Xiaping, Parker, Joel S, Wendl, Michael C, Fulton, Robert S, Demeter, Ryan T, Wilson, Richard K, Carey, Lisa A, Perou, Charles M, Mardis, Elaine R

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Enhancer Remodeling during Adaptive Bypass to MEK Inhibition Is Attenuated by Pharmacologic Targeting of the P-TEFb Complex von Zawistowski, Jon S, Bevill, Samantha M, Goulet, Daniel R, Stuhlmiller, Timothy J, Beltran, Adriana S, Olivares-Quintero, Jose F, Singh, Darshan, Sciaky, Noah, Parker, Joel S, Rashid, Naim U, Chen, Xin, Duncan, James S, Whittle, Martin C, Angus, Steven P, Velarde, Sara Hanna, Golitz, Brian T, He, Xiaping, Santos, Charlene, Darr, David B, Gallagher, Kristalyn, Graves, Lee M, Perou, Charles M, Carey, Lisa A, Earp, H Shelton, Johnson, Gary L

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The molecular portraits of breast tumors are conserved across microarray platforms von Hu, Zhiyuan, Fan, Cheng, Oh, Daniel S, Marron, J S, He, Xiaping, Qaqish, Bahjat F, Livasy, Chad, Carey, Lisa A, Reynolds, Evangeline, Dressler, Lynn, Nobel, Andrew, Parker, Joel, Ewend, Matthew G, Sawyer, Lynda R, Wu, Junyuan, Liu, Yudong, Nanda, Rita, Tretiakova, Maria, Ruiz Orrico, Alejandra, Dreher, Donna, Palazzo, Juan P, Perreard, Laurent, Nelson, Edward, Mone, Mary, Hansen, Heidi, Mullins, Michael, Quackenbush, John F, Ellis, Matthew J, Olopade, Olufunmilayo I, Bernard, Philip S, Perou, Charles M

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Basal-like Breast cancer DNA copy number losses identify genes involved in genomic instability, response to therapy, and patient survival von Weigman, Victor J., Chao, Hann-Hsiang, Shabalin, Andrey A., He, Xiaping, Parker, Joel S., Nordgard, Silje H., Grushko, Tatyana, Huo, Dezheng, Nwachukwu, Chika, Nobel, Andrew, Kristensen, Vessela N., Børresen-Dale, Anne-Lise, Olopade, Olufunmilayo I., Perou, Charles M.

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Cdh1 and Pik3ca Mutations Cooperate to Induce Immune-Related Invasive Lobular Carcinoma of the Breast von An, Yeji, Adams, Jessica R., Hollern, Daniel P., Zhao, Anthony, Chang, Stephen G., Gams, Miki S., Chung, Philip E.D., He, Xiaping, Jangra, Rhea, Shah, Juhi S., Yang, Joanna, Beck, Lauren A., Raghuram, Nandini, Kozma, Katelyn J., Loch, Amanda J., Wang, Wei, Fan, Cheng, Done, Susan J., Zacksenhaus, Eldad, Guidos, Cynthia J., Perou, Charles M., Egan, Sean E.

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Molecular signatures of in situ to invasive progression for basal-like breast cancers: An integrated mouse model and human DCIS study von Thennavan, Aatish, Garcia-Recio, Susana, Liu, Siyao, He, Xiaping, Perou, Charles M.

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Mutation of GATA3 in human breast tumors von Usary, Jerry, Llaca, Victor, Karaca, Gamze, Presswala, Shafaq, Karaca, Mehmet, He, Xiaping, Langerød, Anita, Kåresen, Rolf, Oh, Daniel S, Dressler, Lynn G, Lønning, Per E, Strausberg, Robert L, Chanock, Stephen, Børresen-Dale, Anne-Lise, Perou, Charles M

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