Genome-wide comparative diversity uncovers multiple targets of selection for improvement in hexaploid wheat landraces and cultivars von Cavanagh, Colin R., Chao, Shiaoman, Wang, Shichen, Huang, Bevan Emma, Stephen, Stuart, Kiani, Seifollah, Forrest, Kerrie, Saintenac, Cyrille, Brown-Guedira, Gina L., Akhunova, Alina, See, Deven, Bai, Guihua, Pumphrey, Michael, Tomar, Luxmi, Wong, Debbie, Kong, Stephan, Reynolds, Matthew, da Silva, Marta Lopez, Bockelman, Harold, Talbert, Luther, Anderson, James A., Dreisigacker, Susanne, Baenziger, Stephen, Carter, Arron, Korzun, Viktor, Morrell, Peter Laurent, Dubcovsky, Jorge, Morell, Matthew K., Sorrells, Mark E., Hayden, Matthew J., Akhunov, Eduard

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A multiparent advanced generation inter-cross population for genetic analysis in wheat von Huang, Bevan E., George, Andrew W., Forrest, Kerrie L., Kilian, Andrzej, Hayden, Matthew J., Morell, Matthew K., Cavanagh, Colin R.

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Genomic variants affecting homoeologous gene expression dosage contribute to agronomic trait variation in allopolyploid wheat von He, Fei, Wang, Wei, Rutter, William B., Jordan, Katherine W., Ren, Jie, Taagen, Ellie, DeWitt, Noah, Sehgal, Deepmala, Sukumaran, Sivakumar, Dreisigacker, Susanne, Reynolds, Matthew, Halder, Jyotirmoy, Sehgal, Sunish Kumar, Liu, Shuyu, Chen, Jianli, Fritz, Allan, Cook, Jason, Brown-Guedira, Gina, Pumphrey, Mike, Carter, Arron, Sorrells, Mark, Dubcovsky, Jorge, Hayden, Matthew J., Akhunova, Alina, Morrell, Peter L., Szabo, Les, Rouse, Matthew, Akhunov, Eduard

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A haplotype map of allohexaploid wheat reveals distinct patterns of selection on homoeologous genomes von Jordan, Katherine W, Wang, Shichen, Lun, Yanni, Gardiner, Laura-Jayne, MacLachlan, Ron, Hucl, Pierre, Wiebe, Krysta, Wong, Debbie, Forrest, Kerrie L, Sharpe, Andrew G, Sidebottom, Christine Hd, Hall, Neil, Toomajian, Christopher, Close, Timothy, Dubcovsky, Jorge, Akhunova, Alina, Talbert, Luther, Bansal, Urmil K, Bariana, Harbans S, Hayden, Matthew J, Pozniak, Curtis, Jeddeloh, Jeffrey A, Hall, Anthony, Akhunov, Eduard

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Selection on Optimal Haploid Value Increases Genetic Gain and Preserves More Genetic Diversity Relative to Genomic Selection von Daetwyler, Hans D, Hayden, Matthew J, Spangenberg, German C, Hayes, Ben J

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Transcriptomic analysis of wheat near-isogenic lines identifies PM19-A1 and A2 as candidates for a major dormancy QTL von Barrero, Jose M, Cavanagh, Colin, Verbyla, Klara L, Tibbits, Josquin F G, Verbyla, Arunas P, Huang, B Emma, Rosewarne, Garry M, Stephen, Stuart, Wang, Penghao, Whan, Alex, Rigault, Philippe, Hayden, Matthew J, Gubler, Frank

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Multiplex-ready PCR: a new method for multiplexed SSR and SNP genotyping von Hayden, Matthew J, Nguyen, Thao M, Waterman, Amanda, Chalmers, Kenneth J

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The Global Durum Wheat Panel (GDP): An International Platform to Identify and Exchange Beneficial Alleles von Mazzucotelli, Elisabetta, Sciara, Giuseppe, Mastrangelo, Anna M., Desiderio, Francesca, Xu, Steven S., Faris, Justin, Hayden, Matthew J., Tricker, Penny J., Ozkan, Hakan, Echenique, Viviana, Steffenson, Brian J., Knox, Ron, Niane, Abdoul A., Udupa, Sripada M., Longin, Friedrich C. H., Marone, Daniela, Petruzzino, Giuseppe, Corneti, Simona, Ormanbekova, Danara, Pozniak, Curtis, Roncallo, Pablo F., Mather, Diane, Able, Jason A., Amri, Ahmed, Braun, Hans, Ammar, Karim, Baum, Michael, Cattivelli, Luigi, Maccaferri, Marco, Tuberosa, Roberto, Bassi, Filippo M.

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Genetic Diversity, Population Structure and Ancestral Origin of Australian Wheat von Joukhadar, Reem, Daetwyler, Hans D, Bansal, Urmil K, Gendall, Anthony R, Hayden, Matthew J

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Optimising desired gain indices to maximise selection response von Joukhadar, Reem, Li, Yongjun, Thistlethwaite, Rebecca, Forrest, Kerrie L, Tibbits, Josquin F, Trethowan, Richard, Hayden, Matthew J

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Genomic selection for target traits in the Australian lentil breeding program von Gebremedhin, Alem, Li, Yongjun, Shunmugam, Arun S K, Sudheesh, Shimna, Valipour-Kahrood, Hossein, Hayden, Matthew J, Rosewarne, Garry M, Kaur, Sukhjiwan

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Genomic prediction and selection response for grain yield in safflower von Zhao, Huanhuan, Lin, Zibei, Khansefid, Majid, Tibbits, Josquin F, Hayden, Matthew J

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Improved multi-trait prediction of wheat end-product quality traits by integrating NIR-predicted phenotypes von Azizinia, Shiva, Mullan, Daniel, Rattey, Allan, Godoy, Jayfred, Robinson, Hannah, Moody, David, Forrest, Kerrie, Keeble-Gagnere, Gabriel, Hayden, Matthew J, Tibbits, Josquin Fg, Daetwyler, Hans D

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Genetic Gain and Inbreeding in Different Simulated Genomic Selection Schemes for Grain Yield and Oil Content in Safflower von Zhao, Huanhuan, Khansefid, Majid, Lin, Zibei, Hayden, Matthew J

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Improving Selection Efficiency of Crop Breeding With Genomic Prediction Aided Sparse Phenotyping von He, Sang, Jiang, Yong, Thistlethwaite, Rebecca, Hayden, Matthew J., Trethowan, Richard, Daetwyler, Hans D.

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introgression on wheat chromosome 4DL in RL6077 (Thatcher6/PI 250413) confers adult plant resistance to stripe rust and leaf rust (Lr67) von Hiebert, Colin W, Thomas, Julian B, McCallum, Brent D, Humphreys, D. Gavin, DePauw, Ronald M, Hayden, Matthew J, Mago, Rohit, Schnippenkoetter, Wendelin, Spielmeyer, Wolfgang

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Fine Mapping of Lr49 Using 90K SNP Chip Array and Flow-Sorted Chromosome Sequencing in Wheat von Nsabiyera, Vallence, Baranwal, Deepak, Qureshi, Naeela, Kay, Pippa, Forrest, Kerrie, Valarik, Miroslav, Dolezel, Jaroslav, Hayden, Matthew J., Bariana, Harbans S., Bansal, Urmil K.

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Increase in coleoptile length and establishment by Lcol-A1, a genetic locus with major effect in wheat von Bovill, William D, Hyles, Jessica, Zwart, Alexander B, Ford, Brett A, Perera, Geetha, Phongkham, Tanya, Brooks, Brenton J, Rebetzke, Gregory J, Hayden, Matthew J, Hunt, James R, Spielmeyer, Wolfgang

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Novel Design of Imputation-Enabled SNP Arrays for Breeding and Research Applications Supporting Multi-Species Hybridization von Keeble-Gagnere, Gabriel, Pasam, Raj, Forrest, Kerrie L., Wong, Debbie, Robinson, Hannah, Godoy, Jayfred, Rattey, Allan, Moody, David, Mullan, Daniel, Walmsley, Tresslyn, Daetwyler, Hans D., Tibbits, Josquin, Hayden, Matthew J.

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Benefit of Introgression Depends on Level of Genetic Trait Variation in Cereal Breeding Programmes von Li, Yongjun, Shi, Fan, Lin, Zibei, Robinson, Hannah, Moody, David, Rattey, Allan, Godoy, Jayfred, Mullan, Daniel, Keeble-Gagnere, Gabriel, Hayden, Matthew J., Tibbits, Josquin F. G., Daetwyler, Hans D.

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